Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	DNAH5	Gene	0	13.96	7.15	2.79	3.40	1.16	0.53	1.23
2	265104	Transcript	0	13.21	7.52	2.75	3.42	1.22	0.57	1.26
3	ER1a	ExonRegion	0	1.20	0.93	0.00	0.00	0.00	0.00	0.00
4	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	ER2a	ExonRegion	0	12.48	19.82	3.06	3.86	2.11	1.36	0.38
6	E2a_E3a	KnownJunction	0	19.38	29.08	8.42	8.83	4.43	2.71	2.24
7	ER3a	ExonRegion	0	21.79	40.23	7.64	9.12	4.73	4.47	2.06
8	E3a_E4a	KnownJunction	0	21.88	36.10	7.77	11.11	4.38	1.15	1.36
9	ER4a	ExonRegion	0	15.88	32.64	5.80	6.47	4.65	2.83	1.87
10	E4a_E5a	KnownJunction	0	12.15	20.57	2.77	6.15	4.70	1.13	0.77
11	ER5a	ExonRegion	0	13.05	27.12	3.66	7.77	5.30	2.00	0.62
12	E5a_E6a	KnownJunction	0	18.76	49.31	7.11	9.83	4.06	1.34	0.00
13	ER6a	ExonRegion	0	21.24	46.51	4.00	4.88	6.90	3.17	0.74
14	E6a_E7a	KnownJunction	0	17.51	20.99	1.29	0.00	6.94	3.62	0.00
15	ER7a	ExonRegion	0	12.76	25.44	4.01	5.55	5.17	2.94	0.42
16	E7_Da	NovelBoundary	0	8.91	7.51	0.00	2.22	0.00	0.00	0.00
17	E7a_E8a	KnownJunction	0	11.38	16.63	1.49	4.44	1.18	3.56	0.89
18	ER8a	ExonRegion	0	21.08	28.41	4.33	10.39	7.18	2.80	1.17
19	E8a_E9a	KnownJunction	0	27.59	37.15	6.52	12.62	3.92	3.89	3.44
20	ER9a	ExonRegion	0	21.66	28.08	5.22	11.77	6.20	1.27	1.87
21	E9a_E10a	KnownJunction	0	22.40	22.12	3.81	14.98	5.23	0.00	0.00
22	ER10a	ExonRegion	0	22.65	26.05	5.46	10.64	4.40	0.42	1.79
23	E10a_E11a	KnownJunction	0	21.41	22.75	1.35	5.26	4.82	2.73	1.56
24	ER11a	ExonRegion	0	26.61	28.67	3.76	5.10	2.95	2.77	0.64
25	E11a_E12a	KnownJunction	0	20.90	29.90	1.64	4.17	1.13	0.00	0.00
26	ER12a	ExonRegion	0	20.90	14.23	4.33	3.58	1.06	2.93	0.56
27	E12a_E13a	KnownJunction	0	16.82	4.54	4.45	3.12	0.90	3.70	0.63
28	ER13a	ExonRegion	0	13.97	4.46	2.55	1.30	0.69	1.17	1.10
29	E13a_E14a	KnownJunction	0	9.20	3.73	1.58	0.00	1.18	2.57	1.40
30	ER14a	ExonRegion	0	9.41	3.00	3.15	3.28	0.31	1.97	0.47
31	E14a_E15a	KnownJunction	0	7.63	0.00	2.99	1.33	0.00	3.16	0.00
32	ER15a	ExonRegion	0	10.70	1.55	2.64	2.76	0.40	1.23	0.45
33	E15a_E16a	KnownJunction	0	7.34	1.63	0.00	7.67	0.00	0.00	1.52
34	ER16a	ExonRegion	0	10.05	4.39	1.71	3.69	0.13	0.00	0.77
35	E16a_E17a	KnownJunction	0	6.23	6.46	0.53	0.00	1.18	0.00	0.89
36	ER17a	ExonRegion	0	13.13	3.34	1.68	1.42	0.32	0.00	0.37
37	E17a_E18a	KnownJunction	0	6.76	1.08	2.70	2.82	1.08	0.00	0.89
38	ER18a	ExonRegion	0	16.60	1.11	4.04	1.98	0.58	0.00	1.18
39	E18a_E19a	KnownJunction	0	13.34	0.00	2.62	2.41	0.00	0.00	2.11
40	ER19a	ExonRegion	0	19.20	4.72	2.69	1.63	0.51	0.00	0.37
41	E19a_E20a	KnownJunction	0	16.96	1.34	1.84	1.30	0.00	0.00	0.66
42	ER20a	ExonRegion	0	16.31	2.22	1.75	1.10	0.39	0.00	0.64
43	E20a_E21a	KnownJunction	0	9.15	1.05	3.16	3.87	2.26	0.00	0.85
44	ER21a	ExonRegion	0	20.61	1.86	2.72	2.88	0.56	0.00	0.94
45	E21a_E22a	KnownJunction	0	20.55	1.50	2.85	2.84	0.00	0.00	0.00
46	ER22a	ExonRegion	0	18.79	2.37	3.31	3.35	1.08	0.00	0.14
47	E22a_E23a	KnownJunction	0	7.99	5.12	4.79	3.22	3.34	0.00	0.83
48	ER23a	ExonRegion	0	10.38	5.08	4.42	1.28	0.81	0.00	0.65
49	E23a_E24a	KnownJunction	0	5.77	4.02	7.08	3.33	1.18	0.00	1.28
50	ER24a	ExonRegion	0	7.29	3.17	4.06	2.89	0.59	0.39	0.89
51	E24a_E25a	KnownJunction	0	7.31	1.39	3.33	1.63	0.85	0.00	0.59
52	ER25a	ExonRegion	0	8.45	3.95	2.51	2.96	0.59	0.43	0.77
53	E25a_E26a	KnownJunction	0	3.22	7.67	0.82	5.47	0.00	0.00	2.44
54	ER26a	ExonRegion	0	5.66	7.23	0.75	3.11	0.00	1.01	0.80
55	E26a_E27a	KnownJunction	0	10.30	6.91	0.89	1.41	0.00	1.47	0.75
56	ER27a	ExonRegion	0	13.93	6.72	3.32	1.08	0.22	0.20	1.26
57	E27a_E28a	KnownJunction	0	8.78	0.00	3.98	0.00	1.04	1.23	1.59
58	ER28a	ExonRegion	0	11.62	3.53	3.37	1.97	0.30	1.07	0.56
59	E28a_E29a	KnownJunction	0	20.38	7.04	5.65	0.00	0.00	0.00	0.64
60	ER29a	ExonRegion	0	16.79	7.14	4.44	1.22	0.77	0.25	0.30
61	E29a_E30a	KnownJunction	0	8.85	9.54	3.74	1.68	1.06	1.66	0.00
62	ER30a	ExonRegion	0	12.15	7.90	3.17	2.04	0.62	0.29	0.00
63	E30a_E31a	KnownJunction	0	5.99	6.57	1.45	1.03	0.00	0.00	0.00
64	ER31a	ExonRegion	0	6.99	5.12	1.84	1.76	0.74	0.00	0.00
65	E31a_E32a	KnownJunction	0	6.41	4.57	2.40	0.00	0.00	0.00	0.00
66	ER32a	ExonRegion	0	8.49	7.34	2.80	1.01	0.38	2.71	0.33
67	E32a_E33a	KnownJunction	0	5.16	2.55	0.80	1.63	1.18	6.08	0.00
68	ER33a	ExonRegion	0	12.11	3.44	3.13	2.20	0.30	1.05	0.24
69	E33a_E34a	KnownJunction	0	19.93	3.78	3.55	2.84	0.00	0.00	0.00
70	ER34a	ExonRegion	0	23.21	4.34	5.66	2.70	0.55	0.00	0.30
71	E34a_E35a	KnownJunction	0	24.57	3.18	5.66	2.52	0.00	0.00	0.73
72	ER35a	ExonRegion	0	14.65	2.26	2.60	3.00	0.72	0.00	0.50
73	E35a_E36a	KnownJunction	0	3.82	1.44	0.57	1.68	0.00	0.00	0.00
74	ER36a	ExonRegion	0	8.82	2.09	1.21	1.32	0.23	0.00	1.42
75	E36a_E37a	KnownJunction	0	13.97	1.63	0.83	0.00	1.01	0.00	0.00
76	ER37a	ExonRegion	0	18.13	3.44	2.59	2.30	0.88	0.00	1.78
77	E37a_E38a	KnownJunction	0	13.90	1.63	2.83	6.20	0.00	0.00	0.89
78	ER38a	ExonRegion	0	10.92	2.04	1.63	4.02	1.27	0.00	1.80
79	E38a_E39a	KnownJunction	0	17.41	5.78	1.47	4.52	0.00	0.00	1.33
80	ER39a	ExonRegion	0	14.13	4.61	0.48	5.29	1.43	0.00	1.28
81	E39a_E40a	KnownJunction	0	13.90	3.55	1.41	3.79	3.50	0.00	4.47
82	ER40a	ExonRegion	0	17.08	6.87	0.76	3.71	0.50	0.00	4.00
83	E40a_E41a	KnownJunction	0	6.09	6.75	1.78	2.84	0.00	0.00	1.73
84	ER41a	ExonRegion	0	11.89	5.10	0.66	4.50	1.07	0.00	2.32
85	E41a_E42a	KnownJunction	0	8.56	3.99	2.49	0.00	0.00	0.00	3.78
86	ER42a	ExonRegion	0	10.72	6.14	2.07	2.66	0.33	0.00	2.38
87	E42a_E43a	KnownJunction	0	6.29	2.21	1.09	0.00	0.90	0.00	1.61
88	ER43a	ExonRegion	0	11.41	2.21	3.47	3.43	0.69	0.00	2.01
89	E43a_E44a	KnownJunction	0	14.29	1.58	4.11	1.14	0.95	0.00	0.89
90	ER44a	ExonRegion	0	9.90	3.09	2.66	3.38	0.42	0.00	0.74
91	E44a_E45a	KnownJunction	0	2.30	1.63	1.03	1.06	0.00	0.00	0.00
92	ER45a	ExonRegion	0	3.20	1.73	0.03	1.69	0.20	0.00	1.03
93	E45a_E46a	KnownJunction	0	3.47	1.60	0.00	1.30	0.00	0.00	1.68
94	ER46a	ExonRegion	0	10.50	4.07	1.47	3.29	0.78	0.00	2.50
95	E46a_E47a	KnownJunction	0	14.59	1.42	4.51	6.37	1.15	0.00	1.73
96	ER47a	ExonRegion	0	16.46	5.32	3.15	5.98	1.24	0.00	2.16
97	E47a_E48a	KnownJunction	0	7.99	1.63	4.21	4.98	1.04	0.00	2.14
98	ER48a	ExonRegion	0	10.69	2.77	2.43	4.49	1.10	0.00	0.89
99	E48a_E49a	KnownJunction	0	3.87	5.52	1.65	5.58	0.00	0.00	0.00
100	ER49a	ExonRegion	0	11.81	4.25	2.29	2.66	0.58	0.87	0.48
101	E49a_E50a	KnownJunction	0	13.97	0.00	3.85	0.00	0.00	0.00	0.00
102	ER50a	ExonRegion	0	22.04	3.82	2.47	2.83	0.57	0.00	1.16
103	E50a_E51a	KnownJunction	0	18.63	6.78	1.41	8.91	0.00	0.00	2.54
104	ER51a	ExonRegion	0	20.67	7.14	2.42	5.75	1.50	0.00	1.68
105	E51a_E52a	KnownJunction	0	22.63	8.38	3.16	2.17	1.13	0.00	2.82
106	ER52a	ExonRegion	0	18.25	5.17	2.00	0.13	1.10	0.00	3.00
107	E52a_E53a	KnownJunction	0	11.97	2.78	0.89	0.00	0.00	0.00	4.17
108	ER53a	ExonRegion	0	12.21	2.33	0.43	0.00	0.32	0.00	2.51
109	E53a_E54a	KnownJunction	0	16.67	5.81	1.54	0.00	0.00	0.00	1.98
110	ER54a	ExonRegion	0	24.94	5.25	1.78	0.58	0.77	0.61	1.95
111	E54a_E55a	KnownJunction	0	23.02	4.07	1.68	0.00	0.88	0.00	1.36
112	ER55a	ExonRegion	0	14.62	4.56	1.92	2.31	0.89	0.00	1.33
113	E55a_E56a	KnownJunction	0	5.94	4.23	1.41	1.68	2.24	0.00	0.00
114	ER56a	ExonRegion	0	7.35	5.34	2.43	5.04	0.58	0.00	1.26
115	E56a_E57a	KnownJunction	0	5.16	12.82	2.67	3.36	0.88	0.00	1.48
116	ER57a	ExonRegion	0	10.60	9.38	2.31	3.22	0.05	0.00	2.31
117	E57a_E58a	KnownJunction	0	11.37	6.94	2.63	3.44	0.00	0.00	3.04
118	ER58a	ExonRegion	0	12.19	5.79	3.00	3.78	0.54	0.00	1.61
119	E58a_E59a	KnownJunction	0	21.20	4.68	4.37	4.28	1.06	0.00	4.01
120	ER59a	ExonRegion	0	13.29	2.88	4.19	2.85	0.71	1.01	2.21
121	E59a_E60a	KnownJunction	0	14.97	2.92	5.99	0.00	0.92	2.09	1.72
122	ER60a	ExonRegion	0	10.27	3.35	3.98	2.87	0.89	0.93	2.87
123	E60a_E61a	KnownJunction	0	6.73	5.91	2.97	2.79	2.19	0.00	3.01
124	ER61a	ExonRegion	0	9.53	5.45	2.56	5.62	1.68	0.68	3.57
125	E61a_E62a	KnownJunction	0	14.95	7.33	3.10	3.09	2.14	0.00	3.91
126	ER62a	ExonRegion	0	14.42	4.47	2.19	3.64	1.63	0.69	2.96
127	E62a_E63a	KnownJunction	0	19.18	2.63	3.43	5.45	0.99	0.00	3.77
128	ER63a	ExonRegion	0	26.54	4.42	4.26	3.71	1.32	0.00	1.95
129	E63a_E64a	KnownJunction	0	26.65	6.12	5.22	7.99	2.03	0.00	0.00
130	ER64a	ExonRegion	0	15.76	5.05	4.30	4.90	2.06	0.00	1.10
131	E64a_E65a	KnownJunction	0	15.84	4.94	4.80	6.07	2.14	0.00	2.49
132	ER65a	ExonRegion	0	10.52	8.09	3.31	4.38	1.53	0.51	1.74
133	E65a_E66a	KnownJunction	0	7.41	5.31	0.60	5.50	1.18	0.00	1.43
134	ER66a	ExonRegion	0	9.63	5.29	1.66	4.93	1.56	0.00	1.56
135	E66a_E67a	KnownJunction	0	7.84	3.84	0.00	3.77	1.13	0.00	0.54
136	ER67a	ExonRegion	0	10.66	3.80	2.82	3.31	1.80	0.00	0.93
137	E67a_E68a	KnownJunction	0	7.26	3.52	4.40	2.49	1.15	0.00	0.00
138	ER68a	ExonRegion	0	12.21	4.87	1.92	2.83	0.96	0.00	1.36
139	E68a_E69a	KnownJunction	0	9.90	3.94	1.37	3.06	0.90	0.00	0.57
140	ER69a	ExonRegion	0	17.47	2.82	1.57	1.25	0.96	0.00	1.06
141	E69a_E70a	KnownJunction	0	9.41	6.52	2.08	1.63	0.00	0.00	0.89
142	ER70a	ExonRegion	0	16.83	5.91	2.78	0.67	0.28	0.00	1.16
143	E70a_E71a	KnownJunction	0	9.68	5.67	3.00	0.00	0.00	0.00	0.76
144	ER71a	ExonRegion	0	9.96	3.50	2.45	0.00	0.00	0.00	1.13
145	E71a_E72a	KnownJunction	0	13.45	5.44	0.00	0.00	0.00	0.00	2.25
146	ER72a	ExonRegion	0	12.03	5.82	1.76	2.96	0.19	0.00	1.13
147	E72a_E73a	KnownJunction	0	13.03	2.23	2.11	5.31	0.00	0.00	0.69
148	ER73a	ExonRegion	0	10.72	4.22	2.48	4.72	0.70	0.90	1.70
149	E73a_E74a	KnownJunction	0	3.87	1.13	4.83	1.14	1.08	0.00	1.78
150	ER74a	ExonRegion	0	12.54	4.54	3.39	5.01	1.23	0.59	1.24
151	E74a_E75a	KnownJunction	0	9.65	8.72	1.39	4.47	1.15	1.42	0.00
152	ER75a	ExonRegion	0	10.07	5.16	0.82	2.64	1.02	0.31	0.31
153	E75a_E76a	KnownJunction	0	8.95	8.35	0.65	0.00	0.00	0.00	0.76
154	ER76a	ExonRegion	0	14.65	7.29	1.65	2.66	0.49	0.00	1.36
155	E76a_E77a	KnownJunction	0	6.04	3.42	2.10	6.12	1.18	0.00	1.33
156	ER77a	ExonRegion	0	13.80	4.71	2.73	7.20	0.79	0.00	1.08
157	E77a_E78a	KnownJunction	0	9.35	2.13	2.43	5.69	1.18	0.00	0.67
158	ER78a	ExonRegion	0	21.62	6.49	2.63	6.90	0.88	0.00	1.43
159	E78a_E79a	KnownJunction	0	29.26	6.96	1.72	2.79	1.18	0.00	0.82
160	ER79a	ExonRegion	0	14.13	3.01	2.21	3.43	0.32	0.00	2.07
161	IG26_AR3	ActiveIntergenicRegion	0	15.56	2.27	2.93	2.55	0.74	0.14	1.22