Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 DDX60 Gene 0 19.60 5.38 4.35 0.71 9.72 2.60 34.69 2 393743 Transcript 0 0 0 0 0 0 0 0 3 260184 Transcript 0 0 0 0 0 0 0 0 4 393739 Transcript 0 0.76 0.30 0.38 0.05 2.08 0.51 0.80 5 ER1a ExonRegion 0 7.41 2.10 0.86 0.72 2.24 1.35 14.07 6 E1a_E2a KnownJunction 0 9.68 6.09 0.60 0.00 1.80 0.00 15.05 7 ER2a ExonRegion 0 20.95 11.13 4.90 0.00 9.57 1.26 41.71 8 E2a_E3a KnownJunction 0 12.28 3.94 7.06 0.00 5.09 1.66 36.30 9 ER3a ExonRegion 0 15.38 6.54 6.87 0.00 4.80 2.54 35.91 10 E3a_E4a KnownJunction 0 22.08 7.28 5.78 0.00 5.21 3.81 33.16 11 ER4a ExonRegion 0 24.00 14.13 8.46 0.92 6.44 4.81 48.25 12 E4a_E5a KnownJunction 0 31.14 21.52 9.79 1.16 6.39 4.56 49.21 13 ER5a ExonRegion 0 28.79 13.86 9.06 2.21 7.92 2.63 57.11 14 E5a_E6a KnownJunction 0 29.84 14.95 10.68 1.22 10.79 3.32 61.74 15 ER6a ExonRegion 0 27.57 12.70 7.17 1.04 10.16 1.65 64.35 16 E6a_E7a KnownJunction 0 25.75 6.94 9.01 1.06 9.50 4.40 45.26 17 ER7a ExonRegion 0 29.24 6.64 6.56 1.98 8.53 1.80 46.08 18 E7a_E8a KnownJunction 0 34.23 9.83 6.19 1.68 7.33 2.55 54.20 19 ER8a ExonRegion 0 32.63 5.98 6.13 0.35 9.18 1.75 43.88 20 E8a_E9a KnownJunction 0 30.84 3.60 7.39 0.00 13.30 0.00 31.69 21 ER9a ExonRegion 0 38.71 8.77 8.61 0.00 10.55 3.68 47.40 22 E9a_E10a KnownJunction 0 32.71 8.70 6.16 0.00 7.65 2.89 38.62 23 ER10a ExonRegion 0 29.56 5.79 6.23 0.70 8.12 1.17 42.55 24 E10a_E11a KnownJunction 0 26.77 5.33 6.05 1.16 5.21 1.66 44.00 25 ER11a ExonRegion 0 28.64 5.88 5.73 1.53 8.76 0.38 46.92 26 E11a_E12a KnownJunction 0 38.55 2.31 7.34 2.82 10.21 0.00 33.71 27 ER12a ExonRegion 0 34.04 5.44 6.56 0.92 9.36 0.00 48.77 28 E12a_E13a KnownJunction 0 22.46 8.64 8.77 0.00 13.09 0.00 48.67 29 ER13a ExonRegion 0 42.00 9.48 7.18 1.77 12.62 1.87 53.95 30 E13a_E14a KnownJunction 0 21.65 4.20 5.16 0.00 8.28 3.22 42.01 31 ER14a ExonRegion 0 18.44 5.52 3.95 1.11 8.88 1.64 41.75 32 E14a_E15a KnownJunction 0 21.60 2.63 5.81 0.00 5.16 1.26 45.69 33 ER15a ExonRegion 0 37.83 4.50 7.35 1.34 12.90 2.57 58.15 34 E15a_E16a KnownJunction 0 53.62 10.11 6.96 1.65 14.82 6.22 60.41 35 ER16a ExonRegion 0 49.07 7.99 8.40 1.29 15.18 5.04 70.84 36 E16a_E17a KnownJunction 0 27.74 6.94 6.96 1.68 13.85 3.32 54.36 37 ER17a ExonRegion 0 26.08 6.82 5.67 3.52 11.33 2.82 53.73 38 E17a_E18a KnownJunction 0 25.82 3.78 3.82 2.68 21.81 1.66 57.04 39 ER18a ExonRegion 0 24.33 5.32 4.67 2.33 16.68 4.35 54.32 40 E18a_E19a KnownJunction 0 19.48 9.25 7.86 0.00 17.27 7.34 53.71 41 ER19a ExonRegion 0 27.62 5.96 7.11 0.95 12.86 4.62 52.81 42 E19a_E20a KnownJunction 0 31.34 9.38 7.01 0.00 18.03 5.90 45.73 43 ER20a ExonRegion 0 23.60 7.31 5.40 0.00 12.85 0.83 48.01 44 E20a_E21a KnownJunction 0 16.19 4.02 6.12 0.00 17.82 0.00 45.66 45 ER21a ExonRegion 0 22.07 7.48 4.84 0.00 10.97 0.81 46.96 46 E21a_E22a KnownJunction 0 27.10 8.25 4.86 0.00 14.68 1.34 47.37 47 ER22a ExonRegion 0 21.63 7.30 4.85 1.63 11.90 0.64 62.87 48 E22a_E23a KnownJunction 0 23.52 7.04 2.90 2.65 14.89 0.00 62.48 49 ER23a ExonRegion 0 28.68 5.22 6.15 1.00 14.99 0.91 64.27 50 E23a_E24a KnownJunction 0 26.94 4.07 5.06 0.00 10.07 2.41 60.21 51 ER24a ExonRegion 0 28.15 5.99 7.46 0.00 13.14 3.67 60.71 52 E24a_E25a KnownJunction 0 23.27 8.56 5.00 0.00 16.81 3.00 58.09 53 ER25a ExonRegion 0 21.36 6.42 7.52 0.30 9.91 2.30 50.50 54 E25a_E26a KnownJunction 0 14.60 2.13 6.55 1.65 9.31 2.87 40.99 55 ER26a ExonRegion 0 27.47 4.45 6.44 0.82 9.71 3.03 46.63 56 E26a_E27a KnownJunction 0 35.02 6.52 6.93 1.27 8.53 6.35 44.81 57 ER27a ExonRegion 0 38.30 6.99 5.12 0.13 10.26 3.78 52.03 58 E27a_E28a KnownJunction 0 40.04 9.30 2.49 0.00 11.60 4.80 47.49 59 ER28a ExonRegion 0 48.11 7.11 4.99 0.59 22.00 4.06 61.45 60 E28a_E29a KnownJunction 0 63.22 7.22 7.89 3.25 26.26 4.18 65.37 61 ER29a ExonRegion 0 66.52 13.32 8.50 2.10 26.19 3.72 72.53 62 E29a_E30a KnownJunction 0 72.75 11.35 7.23 1.41 36.26 6.35 69.52 63 ER30a ExonRegion 0 52.29 8.99 7.79 0.51 25.07 2.25 62.00 64 E30a_E31a KnownJunction 0 24.53 11.95 6.71 1.57 17.01 1.02 71.01 65 ER31a ExonRegion 0 27.28 10.82 6.18 0.58 17.71 0.81 74.92 66 E31a_E32a KnownJunction 0 28.41 4.49 7.79 1.14 10.90 0.00 79.21 67 ER32a ExonRegion 0 26.01 6.21 8.99 1.36 17.70 4.75 71.11 68 E32a_E33a KnownJunction 0 35.37 4.31 8.38 0.00 19.02 2.14 66.28 69 ER33a ExonRegion 0 47.82 4.17 9.16 2.57 19.10 7.00 75.44 70 E33a_E35a KnownJunction 0 54.68 1.44 10.85 1.49 19.27 7.18 60.34 71 ER34a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 72 ER35a ExonRegion 0 52.04 9.41 10.71 3.00 22.80 8.56 77.22 73 E35a_E36a KnownJunction 0 34.95 9.59 9.71 0.00 23.84 7.32 51.85 74 ER36a ExonRegion 0 33.28 10.25 7.46 0.68 21.16 13.31 67.00 75 E36a_E37a KnownJunction 0 36.57 9.14 10.07 0.00 13.42 15.70 68.69 76 ER37a ExonRegion 0 45.68 12.43 7.20 0.79 24.87 17.24 70.48 77 E37a_E38a KnownJunction 0 36.78 7.91 6.42 1.49 14.25 17.31 70.42 78 ER38a ExonRegion 0 40.29 12.42 8.40 1.03 14.72 13.86 71.16 79 E38_Da KnownBoundary 0 3.49 0.00 0.00 0.00 0.00 1.66 0.83 80 E38a_E38b KnownJunction 0 34.78 12.98 7.31 0.00 15.01 11.85 65.28 81 ER38b ExonRegion 0 1.52 0.89 0.46 0.16 4.62 0.30 1.04 82 E38_Ab KnownBoundary 0 0.92 3.26 0.00 0.00 1.18 0.00 0.00 83 ER38c ExonRegion 0 17.22 8.41 6.05 0.39 10.72 6.61 53.23 84 ER38d ExonRegion 0 0.77 0.00 0.68 0.00 1.62 1.23 1.35