Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PALLD	Gene	0	296.19	855.81	531.03	1287.34	121.05	283.74	674.32
2	333488	Transcript	0	1.30	3.34	0.55	0.19	0.00	0.45	0.00
3	335742	Transcript	0	353.69	1969.20	641.69	3024.50	198.39	497.67	1413.34
4	261509	Transcript	0	0.63	0.53	2.35	11.86	0.00	3.06	0.26
5	393726	Transcript	0	0	0	0	0	0	0	0
6	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	ER2a	ExonRegion	0	0.01	0.01	0.10	0.00	0.00	0.00	0.00
9	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	ER3a	ExonRegion	0	52.28	144.40	9.07	26.72	8.47	25.42	11.51
11	E3a_E4a	KnownJunction	1	73.10	155.16	10.56	35.46	9.71	27.98	18.95
12	ER4a	ExonRegion	1	85.79	169.83	10.24	31.71	11.47	36.52	17.44
13	E4a_E5a	KnownJunction	1	111.09	179.99	10.42	23.54	10.93	44.49	15.89
14	ER5a	ExonRegion	1	102.09	205.04	14.22	28.79	11.16	46.10	19.74
15	E5a_E6a	KnownJunction	1	91.04	208.17	14.15	38.17	16.81	38.40	14.96
16	ER6a	ExonRegion	1	124.21	186.21	12.06	29.89	15.48	39.12	17.00
17	E6a_E7a	KnownJunction	1	159.82	169.48	12.93	25.66	13.46	43.76	16.62
18	ER7a	ExonRegion	1	138.30	154.88	14.94	33.38	19.95	29.17	15.82
19	E8a_E10a	KnownJunction	1	266.55	249.18	25.56	49.17	26.49	43.04	23.60
20	ER8a	ExonRegion	1	244.33	228.34	25.77	50.55	35.23	39.39	23.98
21	ER9a	ExonRegion	0	1.30	3.34	0.55	0.19	0.00	0.45	0.00
22	ER10a	ExonRegion	1	148.77	224.11	16.01	37.47	17.73	47.31	22.14
23	E10a_E11a	KnownJunction	1	149.56	198.85	17.13	44.81	18.88	49.23	16.51
24	ER11a	ExonRegion	1	103.29	166.20	15.26	36.70	17.83	36.84	20.39
25	E11a_E12a	KnownJunction	0	4.92	2.92	0.76	1.68	0.00	0.00	0.56
26	I11_AR32	ActiveIntronRegion	0	23.92	445.41	42.57	566.42	4.59	107.77	91.85
27	ER12a	ExonRegion	0	54.17	149.43	70.11	182.06	14.98	41.68	58.69
28	ER12b	ExonRegion	0	307.76	1534.65	604.30	2124.97	97.48	428.98	594.12
29	E12a_E13a	KnownJunction	0	309.77	1683.84	678.90	2495.74	144.43	444.80	822.35
30	E12a_E14a	NovelJunction	0	5.11	40.83	5.68	73.17	2.24	9.70	2.72
31	E12a_E15a	NovelJunction	0	11.50	101.72	32.02	104.17	0.99	24.58	9.54
32	ER13a	ExonRegion	0	337.04	1645.05	719.29	2377.91	134.62	426.23	816.12
33	E13a_E14a	KnownJunction	0	380.70	1650.90	787.75	2176.55	153.62	377.47	857.32
34	E13a_E15a	NovelJunction	1	6.73	56.48	38.35	70.11	1.18	11.52	22.21
35	E14_Aa	NovelBoundary	1	139.68	14.55	310.43	4.17	7.72	1.66	5.06
36	ER14a	ExonRegion	0	418.71	1977.16	1013.91	2731.79	194.49	513.69	1183.98
37	E14a_E15a	KnownJunction	0	383.68	1892.04	967.04	2858.84	141.68	511.98	1139.78
38	ER15a	ExonRegion	0	529.44	2133.47	1080.80	3122.39	219.58	580.09	1341.55
39	E15a_E16a	KnownJunction	0	428.45	1852.40	846.96	2597.12	178.66	507.83	1061.84
40	E15a_E17a	NovelJunction	0	10.43	8.41	8.85	28.12	0.00	12.62	1.45
41	ER16a	ExonRegion	0	458.00	1941.65	942.36	2784.52	203.96	536.17	1231.22
42	E16a_E17a	KnownJunction	0	478.83	1958.69	985.52	3092.21	206.39	569.63	1350.99
43	ER17a	ExonRegion	0	546.73	2302.84	1061.59	3131.01	227.18	634.63	1502.14
44	E17_Da	NovelBoundary	0	481.62	2046.62	905.10	2591.86	162.68	556.98	1253.64
45	E17b_E18a	KnownJunction	0	602.09	2352.00	1161.31	3328.49	237.35	719.84	1746.00
46	E17b_E19a	NovelJunction	0	10.10	68.10	32.33	128.60	0.00	22.54	5.29
47	ER17b	ExonRegion	0	596.95	2498.96	1143.99	3285.33	214.34	689.21	1698.06
48	ER17c	ExonRegion	0	581.76	2452.39	1172.87	3359.90	221.74	704.95	1754.75
49	ER18a	ExonRegion	0	547.16	2289.68	1109.32	3329.53	236.63	668.03	1799.06
50	ER18b	ExonRegion	0	420.25	1999.33	900.77	2826.29	223.62	550.14	1657.16
51	E18b_E19a	KnownJunction	0	447.74	1903.13	873.59	2854.72	190.62	619.50	1766.29
52	ER19a	ExonRegion	0	359.76	1869.71	764.39	2950.16	206.91	566.18	1463.00
53	E19a_E20a	KnownJunction	0	453.00	2122.65	904.43	3577.92	387.50	694.94	1799.97
54	ER20a	ExonRegion	1	312.66	1912.75	675.24	2864.11	205.15	569.86	1529.86
55	E20a_E21a	KnownJunction	0	1.52	1.18	2.17	17.23	0.00	3.32	0.59
56	E20a_E22a	KnownJunction	0	353.69	1969.20	641.69	3024.50	198.39	497.67	1413.34
57	ER21a	ExonRegion	0	0.37	0.42	2.58	11.49	0.00	2.83	0.19
58	E21a_E22a	KnownJunction	0	0.00	0.00	2.31	6.85	0.00	3.03	0.00
59	ER22a	ExonRegion	0	481.00	1007.20	864.55	1700.35	195.20	406.73	990.47
60	IG43_SR1	SilentIntergenicRegion	0	7.66	8.64	5.54	15.01	1.07	4.52	1.97