Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PDLIM5	Gene	0	537.06	682.15	212.03	670.33	93.22	188.04	272.30
2	318007	Transcript	0	0.77	1.72	0.51	2.08	0.20	0.31	1.35
3	380180	Transcript	0	0.04	1.35	0.41	0.95	0.24	6.15	1.20
4	317968	Transcript	0	715.39	2214.39	287.58	1647.84	140.14	489.21	573.22
5	359265	Transcript	0	65.05	189.64	30.53	115.49	17.92	38.95	25.47
6	380176	Transcript	0	32.64	136.95	10.16	99.35	1.57	30.63	25.81
7	ER1a	ExonRegion	0	40.90	79.64	14.54	77.31	29.34	15.78	25.34
8	E1_Ab	KnownBoundary	0	147.81	233.03	64.67	225.56	84.90	47.81	85.31
9	ER1b	ExonRegion	0	494.62	1508.88	147.77	1346.30	62.38	322.12	294.52
10	E1a_E2a	KnownJunction	0	720.37	2275.55	216.24	2021.40	57.89	488.10	431.06
11	ER2a	ExonRegion	0	305.89	1725.22	115.14	1239.77	30.81	349.36	221.72
12	E2a_E3a	KnownJunction	0	16.01	91.08	3.66	52.42	2.12	16.11	10.40
13	E2a_E4a	KnownJunction	0	502.53	1992.82	209.26	1698.18	65.93	491.56	344.87
14	E2a_E5a	NovelJunction	1	5.29	127.50	2.20	50.96	0.00	25.19	14.09
15	I2	Intron	0	94.92	167.94	57.86	85.94	2.80	27.23	15.66
16	I2_SR1	SilentIntronRegion	1	108.59	98.12	75.88	36.73	2.24	11.44	5.76
17	I2_AR2	ActiveIntronRegion	0	109.88	287.35	51.64	166.07	4.10	50.53	29.72
18	E3_Aa	NovelBoundary	0	1844.37	1454.83	1361.66	1102.63	1219.20	908.51	1233.33
19	ER3a	ExonRegion	0	114.09	288.21	57.39	178.55	33.71	61.79	40.53
20	E3_Da	NovelBoundary	0	159.62	268.39	61.23	182.05	8.69	64.83	52.28
21	ER4a	ExonRegion	0	718.04	2176.26	302.11	1698.90	172.79	540.74	490.29
22	E4a_E5a	KnownJunction	0	786.53	1855.47	335.23	1594.53	162.32	421.13	494.78
23	E4a_E11a	NovelJunction	0	0.00	7.38	0.89	15.82	0.00	8.33	1.42
24	ER5a	ExonRegion	0	894.57	2504.44	384.56	2055.14	150.99	651.43	688.35
25	E5a_E7a	KnownJunction	0	783.43	2572.60	314.49	1873.46	131.56	665.95	642.19
26	E5a_E7b	KnownJunction	1	0.00	4.33	1.64	3.03	0.95	24.52	4.64
27	E5b_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	E6a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	ER5b	ExonRegion	0	4.61	10.33	3.05	12.47	1.21	1.84	8.10
30	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	ER7a	ExonRegion	0	786.68	2620.03	306.95	1916.63	160.26	535.89	687.96
32	E7_Ab	KnownBoundary	1	503.07	1612.09	186.60	1295.06	101.48	320.44	414.16
33	ER7b	ExonRegion	0	625.25	1879.92	236.63	1525.86	151.80	387.16	549.05
34	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	E7a_E11a	KnownJunction	0	576.05	1450.55	241.28	1153.43	128.61	265.80	389.51
36	E8a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	ER8a	ExonRegion	0	0.17	1.08	0.00	0.76	0.00	0.07	0.15
38	ER9a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	E9a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	ER10a	ExonRegion	0	8.73	9.84	3.79	5.41	1.19	1.76	3.30
41	E10a_E11a	KnownJunction	1	56.56	264.05	16.54	193.29	1.96	59.50	48.33
42	ER11a	ExonRegion	0	556.72	1619.60	254.74	1313.61	125.07	294.59	433.15
43	E11a_E12a	KnownJunction	0	387.64	1338.98	178.22	967.42	82.46	254.97	274.27
44	ER12a	ExonRegion	0	469.12	1431.69	200.27	1161.83	92.76	265.81	351.57
45	E12a_E13a	KnownJunction	1	30.09	137.77	8.08	56.54	5.26	13.43	9.73
46	E12a_E14a	KnownJunction	0	390.83	879.46	152.40	874.80	104.59	170.77	309.86
47	ER13a	ExonRegion	0	33.19	73.58	9.87	28.64	3.95	14.69	11.41
48	ER14a	ExonRegion	0	368.21	1198.75	158.45	1118.94	100.21	221.28	385.13
49	E14a_E15a	KnownJunction	0	387.92	1240.54	178.19	1102.47	91.64	210.49	373.71
50	ER15a	ExonRegion	0	428.50	1193.75	183.83	1135.58	107.73	222.49	388.75
51	E15a_E16a	KnownJunction	0	476.15	1153.45	232.21	1236.84	117.45	200.86	414.11
52	E16_Aa	NovelBoundary	1	204.13	7.64	103.29	2.79	0.00	0.00	0.64
53	ER16a	ExonRegion	0	822.07	1129.92	301.29	1163.05	155.29	231.11	435.48
54	E16a_E17a	KnownJunction	0	853.46	1162.46	271.31	1268.03	162.80	250.82	471.03
55	ER17a	ExonRegion	0	1363.88	1460.95	399.12	1543.41	209.52	344.33	636.74
56	E17a_E18a	KnownJunction	0	1594.67	1469.36	405.07	1662.15	194.22	423.97	668.85
57	ER18a	ExonRegion	0	1091.09	1146.10	330.02	1208.15	159.39	257.45	525.76
58	E18a_E19a	KnownJunction	0	1317.49	1080.65	367.23	1246.73	133.11	289.38	653.04
59	ER19a	ExonRegion	0	696.97	513.33	280.30	628.67	113.44	192.46	298.00
60	IG34_AR1	ActiveIntergenicRegion	0	8.41	6.73	3.31	7.57	1.96	2.04	9.98
61	IG34_SR1	SilentIntergenicRegion	0	6.77	0.95	2.21	0.98	0.24	0.28	7.37
62	IG34_SR4	SilentIntergenicRegion	0	4.28	0.66	1.82	0.82	0.08	0.19	9.07
63	IG34_SR6	SilentIntergenicRegion	0	4.99	0.25	1.70	2.59	0.00	0.25	7.86