Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	USP53	Gene	0	671.30	796.97	501.13	660.42	41.50	372.65	134.95
2	274030	Transcript	0	550.53	779.63	435.47	639.68	35.27	305.56	123.26
3	ER1a	ExonRegion	1	76.13	685.75	59.48	269.35	6.72	130.79	34.75
4	E1a_E2a	KnownJunction	1	44.40	603.01	31.66	165.36	0.00	65.55	46.72
5	E1a_E3a	NovelJunction	1	106.55	518.76	152.40	386.32	6.29	176.66	20.08
6	I1_AR1	ActiveIntronRegion	1	28.39	203.57	11.30	47.13	0.89	35.35	2.88
7	ER2a	ExonRegion	1	99.78	707.16	59.07	184.17	3.72	186.05	69.04
8	E2a_E3a	KnownJunction	1	116.30	909.67	78.99	244.88	3.97	244.23	71.50
9	ER3a	ExonRegion	1	302.26	1262.63	241.05	431.66	16.68	337.28	92.67
10	E3a_E4a	KnownJunction	0	99.02	448.56	49.61	211.23	1.18	110.07	32.32
11	E3a_E5a	NovelJunction	0	196.21	600.43	164.58	239.51	11.18	205.66	43.94
12	E3a_E6a	NovelJunction	1	102.73	157.76	173.84	224.40	20.26	79.60	16.15
13	ER4a	ExonRegion	1	79.14	486.95	47.93	189.29	6.85	108.57	28.42
14	E4a_E5a	KnownJunction	1	54.18	388.76	30.28	189.01	2.21	107.49	22.17
15	E4a_E6a	NovelJunction	0	33.03	53.04	20.58	29.85	0.00	11.74	5.86
16	ER5a	ExonRegion	0	377.51	781.99	286.54	416.51	17.12	267.54	94.26
17	E5a_E6a	KnownJunction	0	453.37	605.00	308.42	488.15	29.97	255.64	94.39
18	ER6a	ExonRegion	0	511.96	873.34	428.27	729.07	34.31	330.97	122.40
19	E6a_E7a	KnownJunction	0	673.77	971.44	525.37	850.39	33.50	379.81	144.19
20	ER7a	ExonRegion	0	711.80	1031.28	560.32	904.80	40.52	358.91	149.32
21	E7a_E8a	KnownJunction	0	539.74	929.06	479.48	888.89	40.30	295.90	139.59
22	ER8a	ExonRegion	0	751.09	1018.71	598.96	943.29	48.34	340.25	171.61
23	E8a_E9a	KnownJunction	0	754.60	944.12	574.97	1044.36	46.29	357.24	163.39
24	ER9a	ExonRegion	0	671.17	878.02	509.61	843.08	39.91	338.32	152.83
25	E9a_E10a	KnownJunction	0	560.90	761.69	461.00	685.87	32.74	281.18	116.51
26	E9a_E11a	NovelJunction	0	24.90	15.74	21.02	30.18	0.00	10.16	0.00
27	E9a_E12a	NovelJunction	1	15.24	18.31	22.00	50.77	0.00	17.85	0.00
28	ER10a	ExonRegion	0	691.49	753.62	597.73	764.61	46.20	320.29	151.94
29	E10a_E11a	KnownJunction	0	847.35	735.44	604.69	702.26	48.30	359.36	139.90
30	E10a_E12a	NovelJunction	1	16.99	19.73	24.11	50.09	0.00	23.10	0.54
31	ER11a	ExonRegion	0	806.11	630.78	612.15	641.89	40.23	283.57	111.45
32	E11a_E12a	KnownJunction	0	722.01	553.20	515.64	516.44	32.87	249.32	83.72
33	E11a_E13a	NovelJunction	1	52.81	59.64	43.60	84.31	0.90	25.57	2.29
34	I11	Intron	1	152.29	42.33	78.34	19.16	2.91	11.26	5.72
35	I11_SR1	SilentIntronRegion	0	152.66	42.44	78.53	19.21	2.92	11.29	5.74
36	E12_Aa	NovelBoundary	1	244.34	63.03	111.00	17.39	0.88	3.94	6.32
37	ER12a	ExonRegion	0	935.98	826.31	610.77	775.81	40.27	351.97	122.15
38	E12a_E13a	KnownJunction	0	704.01	750.26	503.08	663.46	40.00	302.22	110.57
39	I12_AR1	ActiveIntronRegion	0	144.95	16.21	93.08	9.36	2.56	3.69	7.57
40	I12_AR2	ActiveIntronRegion	1	165.98	16.66	104.75	7.75	1.68	3.68	6.60
41	I12_AR3	ActiveIntronRegion	1	194.96	24.81	94.19	10.02	2.22	5.04	5.71
42	ER13a	ExonRegion	0	727.30	824.17	546.84	765.83	39.14	350.15	143.78
43	E13a_E14a	KnownJunction	0	533.71	582.73	414.63	547.00	34.16	271.80	110.42
44	E13a_E15a	NovelJunction	0	121.07	157.60	98.01	163.77	2.24	65.82	13.79
45	E13a_E16a	NovelJunction	1	8.93	24.04	2.20	16.42	0.00	0.00	0.00
46	ER14a	ExonRegion	0	506.49	620.61	469.69	600.62	36.25	308.68	127.43
47	E14a_E15a	KnownJunction	0	428.75	595.94	416.51	553.42	34.05	289.41	128.84
48	ER15a	ExonRegion	0	542.66	798.26	525.99	699.06	40.61	382.29	141.95
49	E15a_E16a	KnownJunction	0	605.64	854.77	590.49	777.32	55.60	368.09	169.67
50	ER16a	ExonRegion	0	849.30	1033.19	716.08	989.12	55.81	463.67	184.40
51	E16a_E17a	KnownJunction	0	686.62	1048.05	598.60	991.94	79.21	507.08	213.82
52	ER17a	ExonRegion	0	740.33	918.61	632.46	910.48	61.29	419.83	200.69
53	E17a_E18a	KnownJunction	0	734.02	800.99	613.00	906.79	47.72	377.58	172.82
54	E17a_E19a	NovelJunction	1	98.87	203.66	130.89	186.17	4.50	135.87	5.57
55	ER18a	ExonRegion	0	824.01	757.56	629.41	795.33	57.58	377.44	173.73
56	E18a_E19a	KnownJunction	0	774.16	753.04	611.31	719.46	58.72	380.93	179.07
57	ER19a	ExonRegion	0	832.50	721.60	572.34	668.13	52.72	446.38	148.24
58	IG12	Intergenic	0	62.33	82.04	62.18	77.82	47.68	73.75	44.03
59	IG12_AR1	ActiveIntergenicRegion	0	99.83	103.52	74.18	94.88	11.81	85.65	22.81
60	IG12_AR3	ActiveIntergenicRegion	0	38.19	83.83	67.31	83.08	105.01	83.71	82.77