Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 HERC3 Gene 0 33.79 19.86 10.97 3.68 6.38 12.48 129.78 2 402738 Transcript 0 1.75 1.42 0.37 0.03 0.79 0.09 3.72 3 407637 Transcript 0 3.71 4.26 1.61 0.48 1.10 3.13 4.74 4 264345 Transcript 0 5.38 13.97 2.03 3.12 0.40 6.13 29.68 5 ER1a ExonRegion 0 2.74 2.31 0.73 0.05 0.54 0.18 3.67 6 E1_Ab KnownBoundary 0 7.89 5.91 0.65 0.00 0.00 0.00 6.64 7 ER1b ExonRegion 0 18.67 18.66 3.92 6.07 2.07 7.80 56.39 8 E1a_E2a KnownJunction 0 8.86 11.45 2.43 3.25 0.00 3.06 31.44 9 ER2a ExonRegion 1 7.14 19.77 3.62 4.84 0.36 4.95 39.87 10 E2a_E3b KnownJunction 0 8.38 26.85 5.53 7.15 1.18 11.55 54.67 11 ER3a ExonRegion 0 5.38 13.97 2.03 3.12 0.40 6.13 29.68 12 ER3b ExonRegion 0 20.26 35.40 8.10 4.82 3.74 19.64 121.29 13 E3a_E4a KnownJunction 0 16.24 33.63 12.82 3.20 2.07 13.99 111.43 14 ER4a ExonRegion 0 22.27 27.49 8.48 3.46 3.30 16.15 117.22 15 E4a_E5a KnownJunction 0 18.01 27.69 7.56 6.01 4.29 12.25 124.80 16 ER5a ExonRegion 0 19.54 25.59 12.16 4.60 4.76 10.35 123.30 17 E5a_E6a KnownJunction 0 23.32 28.40 12.44 4.85 7.35 10.96 122.26 18 ER6a ExonRegion 0 20.95 24.48 11.78 2.67 4.44 17.05 114.68 19 E6a_E7a KnownJunction 0 40.67 38.83 20.72 3.17 11.23 28.92 191.85 20 ER7a ExonRegion 0 38.11 38.86 18.94 3.90 5.98 15.51 181.75 21 E7a_E8a KnownJunction 1 28.49 52.04 16.64 6.50 4.56 8.07 169.87 22 ER8a ExonRegion 0 39.81 35.70 16.41 7.19 6.81 11.24 197.14 23 E8a_E9a KnownJunction 1 40.66 35.36 16.66 8.32 13.05 7.21 217.54 24 ER9a ExonRegion 0 37.62 26.16 15.38 5.82 7.05 8.96 208.38 25 E9_Da KnownBoundary 0 0.97 1.31 0.00 0.00 0.00 0.00 2.71 26 E9a_E10a KnownJunction 0 44.43 9.72 13.80 8.10 7.54 7.21 153.35 27 ER9b ExonRegion 0 3.71 4.26 1.61 0.48 1.10 3.13 4.74 28 ER10a ExonRegion 0 49.03 16.52 16.81 7.64 7.61 10.17 204.50 29 E10a_E11a KnownJunction 0 40.69 26.25 16.50 13.06 14.64 14.07 247.53 30 ER11a ExonRegion 0 60.23 19.20 17.77 6.58 10.31 13.24 212.28 31 E11a_E12a KnownJunction 0 65.69 16.08 15.36 7.15 10.54 13.27 193.10 32 ER12a ExonRegion 0 64.09 17.57 15.17 4.99 10.04 10.42 196.72 33 E12a_E13a KnownJunction 0 54.69 18.71 15.49 1.68 5.03 7.48 175.42 34 ER13a ExonRegion 0 54.04 17.39 18.16 2.32 7.37 12.21 193.24 35 E13a_E14a KnownJunction 0 48.98 15.97 12.01 1.52 9.94 10.72 191.88 36 E14_Aa NovelBoundary 1 23.62 0.00 6.04 0.00 0.00 0.00 1.46 37 ER14a ExonRegion 0 38.60 22.26 12.06 2.25 8.41 21.44 188.81 38 E14a_E15a KnownJunction 0 30.69 25.80 13.74 2.38 9.45 28.57 162.96 39 ER15a ExonRegion 0 34.51 24.87 13.43 4.11 8.91 12.31 177.59 40 E15a_E16a KnownJunction 0 42.79 14.95 13.22 5.53 11.48 11.10 198.59 41 ER16a ExonRegion 0 40.05 27.97 15.10 6.36 11.94 14.03 193.99 42 E16a_E17a KnownJunction 0 21.11 12.64 7.63 4.36 6.34 12.92 114.92 43 E16a_E18a NovelJunction 1 4.86 5.91 1.71 1.60 4.43 1.47 45.77 44 E17a_E18a KnownJunction 0 23.42 29.61 4.71 4.88 1.94 11.12 127.64 45 ER17a ExonRegion 0 31.06 32.40 7.93 6.70 4.59 16.76 177.05 46 ER18a ExonRegion 0 32.50 36.53 10.91 6.82 5.53 19.75 181.44 47 E18a_E19a KnownJunction 0 34.45 33.31 14.93 10.48 9.52 11.28 178.78 48 ER19a ExonRegion 0 28.96 25.26 9.72 4.90 8.04 13.41 159.92 49 E19a_E20a KnownJunction 0 23.75 18.76 14.63 1.52 2.07 11.23 160.10 50 ER20a ExonRegion 0 36.05 22.38 15.05 5.11 7.88 11.77 169.08 51 E20a_E21a KnownJunction 0 46.83 17.00 10.52 6.20 5.35 18.87 180.75 52 ER21a ExonRegion 0 38.90 19.73 14.98 3.74 11.02 9.64 189.71 53 E21a_E22a KnownJunction 0 48.90 22.51 15.58 8.26 10.14 9.92 178.51 54 ER22a ExonRegion 0 55.63 23.57 21.94 5.84 13.11 13.21 179.18 55 E22a_E23a KnownJunction 0 51.97 19.86 19.57 4.23 8.64 9.70 171.40 56 ER23a ExonRegion 0 44.53 25.45 18.04 1.94 11.30 14.15 220.36 57 E23a_E24a KnownJunction 0 65.09 24.09 16.71 3.03 14.62 17.26 239.74 58 ER24a ExonRegion 0 64.98 28.33 19.23 5.27 14.27 14.17 214.78 59 E24a_E25a KnownJunction 0 75.67 29.21 13.55 4.23 19.53 22.48 233.92 60 ER25a ExonRegion 0 76.41 27.25 22.08 3.67 16.20 16.12 230.95 61 E25a_E26a KnownJunction 0 62.84 31.21 16.20 4.39 17.54 14.18 179.87 62 ER26a ExonRegion 0 51.66 22.30 13.91 4.72 8.24 17.67 163.96 63 ER26b ExonRegion 0 0.77 0.52 0.00 0.00 1.04 0.00 3.76 64 IG18 Intergenic 0 6.47 3.23 1.52 1.76 0.65 1.12 11.63 65 IG18_AR1 ActiveIntergenicRegion 0 14.81 7.33 3.58 5.02 1.54 2.47 25.40 66 IG18_SR1 SilentIntergenicRegion 0 14.64 6.28 3.99 0.86 1.62 3.98 20.40 67 IG18_AR2 ActiveIntergenicRegion 0 9.81 5.39 3.18 2.55 0.80 3.21 23.23 68 IG18_SR2 SilentIntergenicRegion 0 10.29 0.88 0.64 3.40 0.72 1.68 9.72 69 IG18_SR6 SilentIntergenicRegion 0 7.72 2.94 1.17 1.61 0.53 0.59 11.17 70 IG18_AR8 ActiveIntergenicRegion 0 6.48 3.64 1.36 1.88 1.43 1.84 13.95 71 IG18_AR9 ActiveIntergenicRegion 0 5.70 2.55 1.04 1.50 0.58 1.13 17.20 72 IG18_SR8 SilentIntergenicRegion 0 11.39 2.29 3.03 3.74 2.10 4.90 27.50 73 IG18_AR10 ActiveIntergenicRegion 0 6.38 4.66 0.86 1.36 0.58 0.79 15.70 74 IG18_AR11 ActiveIntergenicRegion 0 4.46 3.08 1.65 1.60 0.61 1.08 10.72