Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	TAPT1	Gene	0	63.37	64.44	77.49	108.66	21.87	125.68	22.97
2	304584	Transcript	0	58.80	0.00	69.31	0.00	0.00	0.00	0.00
3	405303	Transcript	0	62.60	61.94	77.15	101.22	22.46	144.30	23.36
4	399920	Transcript	0	0.97	2.12	0.94	2.28	0.03	1.95	0.14
5	IG50_AR7	ActiveIntergenicRegion	0	3.51	0.51	1.19	0.45	8.74	0.13	1.23
6	IG50_AR6	ActiveIntergenicRegion	0	4.68	0.00	3.77	1.25	14.23	0.00	0.41
7	IG50_SR6	SilentIntergenicRegion	0	3.92	0.00	2.66	0.87	17.48	0.42	1.53
8	IG50_AR5	ActiveIntergenicRegion	0	1.80	0.20	1.50	1.34	11.38	0.33	0.70
9	IG50_AR1	ActiveIntergenicRegion	0	3.75	1.60	3.91	1.59	9.57	1.23	1.57
10	ER1a	ExonRegion	0	0.00	1.32	0.00	0.93	0.00	0.29	0.11
11	E1_Ab	KnownBoundary	0	0.00	4.07	0.00	5.01	0.00	0.00	0.64
12	ER1b	ExonRegion	0	0.00	10.54	0.20	12.89	0.00	12.12	0.67
13	E1_Da	KnownBoundary	0	0.00	5.83	0.00	8.34	0.00	16.05	0.00
14	E1a_E1c	KnownJunction	0	0.00	7.28	0.00	5.99	0.00	7.18	0.00
15	E1_Ac	KnownBoundary	0	0.00	3.15	0.73	3.22	0.00	2.89	0.73
16	ER1c	ExonRegion	0	0.31	11.18	0.68	21.20	0.00	14.71	0.67
17	ER1d	ExonRegion	0	0.77	10.14	0.93	14.75	0.62	13.07	0.06
18	E1_Db	KnownBoundary	0	2.40	3.15	0.00	7.72	0.00	0.00	0.77
19	E1b_E1d	KnownJunction	0	0.00	5.57	0.00	8.10	0.00	6.03	0.00
20	E1_Ad	KnownBoundary	0	0.00	5.07	0.59	1.68	0.00	3.97	0.00
21	ER1e	ExonRegion	0	0.77	10.93	1.63	12.47	0.81	12.26	0.00
22	ER1f	ExonRegion	0	3.09	19.71	3.17	19.71	1.97	22.84	0.52
23	E1_Dc	NovelBoundary	0	7.21	31.47	8.84	34.00	5.30	36.96	3.50
24	E1c_E1e	KnownJunction	0	1.79	11.93	0.82	15.39	0.00	13.64	0.77
25	E1d_E2a	KnownJunction	0	21.06	39.07	25.38	68.11	2.74	53.81	9.13
26	E1d_E3a	NovelJunction	0	0.00	5.60	1.54	9.18	0.00	9.81	0.56
27	E1d_E4a	KnownJunction	0	1.30	5.31	2.05	7.69	0.00	7.26	0.00
28	ER1g	ExonRegion	0	5.38	30.86	7.72	38.16	3.24	38.99	2.70
29	ER1h	ExonRegion	0	14.05	39.02	18.05	60.35	2.62	51.64	6.45
30	I1_AR5	ActiveIntronRegion	0	17.71	4.51	11.90	3.10	1.07	5.37	2.03
31	ER2a	ExonRegion	0	67.60	89.48	82.62	149.04	22.76	193.18	22.89
32	E2a_E3a	KnownJunction	0	108.02	116.22	139.18	231.60	32.09	291.23	32.42
33	E2a_E4a	NovelJunction	0	8.66	14.87	9.00	30.72	1.18	27.17	1.78
34	ER3a	ExonRegion	0	111.15	123.74	140.71	210.73	29.23	291.25	44.68
35	E3a_E4a	KnownJunction	0	94.60	107.82	115.16	175.98	41.82	226.40	45.59
36	ER4a	ExonRegion	0	108.18	137.14	132.83	203.06	31.54	225.70	41.86
37	E4a_E12a	KnownJunction	0	116.16	131.80	147.24	258.02	39.63	222.52	37.35
38	E4b_E5a	KnownJunction	0	1.70	0.00	1.77	0.00	0.00	0.00	0.89
39	ER4b	ExonRegion	0	0.77	0.81	0.00	0.00	0.00	0.61	0.00
40	ER5a	ExonRegion	0	0.81	0.43	0.48	0.00	0.00	0.43	0.00
41	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.87
42	ER6a	ExonRegion	0	1.82	0.00	1.16	0.00	0.00	0.00	0.00
43	E6a_E7a	KnownJunction	0	2.80	0.00	2.39	1.52	0.00	0.00	0.00
44	ER7a	ExonRegion	0	1.28	0.00	1.74	0.00	0.00	0.00	0.00
45	E7a_E8a	KnownJunction	0	0.00	0.00	1.70	0.00	0.00	0.00	0.00
46	ER8a	ExonRegion	0	0.71	0.00	1.03	0.00	0.53	0.00	0.00
47	E8a_E9a	KnownJunction	0	3.61	3.26	2.62	1.68	0.00	0.00	0.00
48	ER9a	ExonRegion	0	0.91	2.80	1.23	0.75	0.00	0.00	0.00
49	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
50	ER10a	ExonRegion	0	0.00	0.81	0.00	0.00	0.00	0.00	0.00
51	ER11a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
52	ER12a	ExonRegion	0	152.07	168.34	200.76	280.66	32.79	299.33	48.91
53	E12a_E13a	KnownJunction	0	168.92	183.72	230.00	268.82	25.59	316.26	45.14
54	ER13a	ExonRegion	0	143.19	148.34	206.73	237.71	34.19	231.81	43.76
55	E13a_E14a	KnownJunction	0	125.11	137.85	177.66	187.20	33.08	169.19	32.22
56	ER14a	ExonRegion	0	170.74	131.19	223.97	224.79	43.44	211.50	42.30
57	E14a_E15a	KnownJunction	0	194.75	147.33	238.84	247.64	50.62	226.38	47.47
58	ER15a	ExonRegion	0	239.54	155.28	271.97	293.71	60.35	285.61	59.96
59	E15a_E16a	KnownJunction	0	267.67	167.19	304.72	352.10	49.13	342.50	59.91
60	ER16a	ExonRegion	0	298.76	204.64	303.83	391.55	60.16	370.20	64.19
61	E16_Da	NovelBoundary	1	31.86	7.28	22.12	14.79	3.30	12.68	2.46
62	E16a_E17a	KnownJunction	0	269.16	214.30	271.67	367.63	62.91	315.62	70.85
63	I16	Intron	0	19.48	9.43	21.26	7.83	2.05	10.79	1.40
64	I16_SR1	SilentIntronRegion	1	16.40	8.17	18.75	6.21	1.55	9.81	0.69
65	I16_AR1	ActiveIntronRegion	0	22.03	10.47	23.36	9.16	2.45	11.60	1.98
66	E17_Aa	NovelBoundary	0	18.14	10.59	19.20	4.28	2.14	21.71	2.81
67	ER17a	ExonRegion	0	238.10	182.86	260.13	311.47	76.96	268.96	64.59
68	E17a_E18a	KnownJunction	0	201.73	130.07	203.79	251.38	61.23	226.03	53.94
69	ER18a	ExonRegion	0	181.62	121.86	190.96	206.85	81.29	200.03	65.95
70	E18a_E19a	KnownJunction	0	151.90	107.61	178.51	174.52	61.67	133.01	65.05
71	E18a_E20a	NovelJunction	1	51.00	60.98	33.54	112.21	2.28	113.77	4.39
72	I18_AR3	ActiveIntronRegion	0	15.57	5.49	11.05	2.35	2.24	1.80	0.71
73	E19_Aa	NovelBoundary	1	14.62	17.86	7.39	4.28	5.92	3.89	2.65
74	ER19a	ExonRegion	0	125.83	122.32	181.19	182.28	53.43	171.40	71.74
75	E19_Da	NovelBoundary	0	17.98	9.54	10.00	4.33	0.00	11.60	6.66
76	E19a_E20a	KnownJunction	0	103.03	105.85	160.27	154.93	43.78	184.25	70.18
77	I19_SR1	SilentIntronRegion	0	16.36	7.45	10.68	2.80	2.78	3.50	1.74
78	I19_AR1	ActiveIntronRegion	0	21.24	9.74	10.79	6.51	2.54	2.83	1.69
79	E20_Aa	NovelBoundary	1	17.94	7.91	5.88	6.94	4.54	12.73	0.79
80	ER20a	ExonRegion	0	147.55	161.99	168.37	275.69	62.85	305.86	65.08
81	E20a_E21a	KnownJunction	0	120.94	139.48	150.31	284.05	47.56	309.62	58.06
82	ER21a	ExonRegion	0	155.46	162.67	162.72	294.75	56.84	342.13	53.05
83	E21_Da	KnownBoundary	0	105.61	126.00	134.20	208.71	35.06	287.00	44.51
84	E21a_E21b	KnownJunction	0	58.80	0.00	69.31	0.00	0.00	0.00	0.00
85	ER21b	ExonRegion	0	98.51	89.88	116.62	144.72	30.96	217.08	33.55
86	E21_Ab	KnownBoundary	0	73.40	100.57	107.96	176.25	27.02	254.38	30.50
87	ER21c	ExonRegion	0	136.31	138.34	150.64	221.51	25.54	321.34	39.92
88	E21_Db	KnownBoundary	0	138.39	110.50	122.77	194.30	15.01	269.04	39.15
89	ER21d	ExonRegion	0	26.70	33.99	37.68	57.72	13.96	71.53	13.16