Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ATP13A3	Gene	0	363.49	268.06	514.82	485.14	201.90	1242.36	315.62
2	310773	Transcript	0	0	0	0	0	0	0	0
3	256031	Transcript	0	252.54	206.49	382.33	374.66	139.56	967.85	239.31
4	IG36	Intergenic	0	12.84	3.68	11.87	4.09	2.01	5.12	1.75
5	IG36_AR11	ActiveIntergenicRegion	0	2.06	0.52	0.41	2.14	2.62	9.33	0.15
6	IG36_AR8	ActiveIntergenicRegion	0	2.49	3.61	0.77	4.61	1.71	17.82	0.18
7	IG36_SR5	SilentIntergenicRegion	0	0.71	5.68	0.79	6.59	1.28	10.03	0.58
8	IG36_AR7	ActiveIntergenicRegion	0	2.88	5.27	1.51	11.09	4.19	32.37	2.31
9	IG36_AR6	ActiveIntergenicRegion	0	13.59	3.62	19.18	13.95	1.72	6.95	1.17
10	IG36_SR3	SilentIntergenicRegion	0	19.55	5.09	18.76	5.62	2.60	4.81	2.45
11	IG36_AR5	ActiveIntergenicRegion	0	9.85	8.01	14.78	3.98	1.36	1.90	3.31
12	IG36_AR4	ActiveIntergenicRegion	0	6.78	5.86	15.55	4.39	0.81	1.39	2.43
13	IG36_AR3	ActiveIntergenicRegion	0	8.18	6.59	12.63	2.49	1.16	0.00	1.64
14	IG36_AR2	ActiveIntergenicRegion	0	12.45	5.02	11.15	2.49	0.92	1.06	0.94
15	IG36_AR1	ActiveIntergenicRegion	0	30.33	4.90	22.16	4.38	1.87	1.99	1.20
16	IG36_SR1	SilentIntergenicRegion	0	16.41	3.51	14.80	3.28	2.13	3.51	2.37
17	ER1a	ExonRegion	0	8.69	1.30	8.77	1.86	0.80	0.79	1.15
18	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	ER2a	ExonRegion	0	69.29	179.66	125.33	293.19	42.15	700.88	105.74
20	E2a_E3a	KnownJunction	0	157.47	296.50	225.28	405.96	77.87	1046.32	167.16
21	ER3a	ExonRegion	0	241.04	283.41	312.87	439.62	120.56	1069.85	183.72
22	E3a_E4a	KnownJunction	1	648.02	381.59	668.61	672.54	279.22	1600.05	260.86
23	ER4a	ExonRegion	1	798.17	431.91	831.58	761.23	247.18	1641.56	291.86
24	E4a_E5a	KnownJunction	1	632.67	307.87	711.14	548.92	286.48	1156.87	242.57
25	E5_Aa	NovelBoundary	1	156.33	0.00	194.17	0.00	1.08	1.02	0.64
26	ER5a	ExonRegion	0	399.35	251.89	500.97	342.95	149.39	766.42	247.08
27	E5a_E6a	KnownJunction	0	257.86	193.52	344.16	213.69	115.75	501.10	231.67
28	E5a_E7a	NovelJunction	1	81.46	51.83	166.26	159.81	0.95	336.18	16.85
29	ER6a	ExonRegion	0	269.47	213.84	348.05	236.98	148.06	496.47	264.70
30	E6a_E7a	KnownJunction	1	271.71	229.40	330.81	197.52	144.22	441.45	266.09
31	ER7a	ExonRegion	0	292.04	230.96	435.14	298.65	158.55	698.29	316.45
32	E7a_E8a	KnownJunction	0	286.15	220.44	476.68	370.50	143.37	777.60	312.58
33	ER8a	ExonRegion	0	271.79	297.17	445.59	492.15	151.67	882.94	357.39
34	E8a_E9a	KnownJunction	0	231.36	318.36	400.03	568.83	160.06	889.83	331.57
35	ER9a	ExonRegion	0	254.29	329.93	432.67	593.35	166.43	904.99	388.96
36	E9a_E10a	KnownJunction	0	265.30	294.24	422.20	552.52	184.65	882.84	375.76
37	ER10a	ExonRegion	0	268.96	350.54	452.11	630.32	196.09	994.77	397.90
38	E10a_E11a	KnownJunction	0	254.52	357.29	452.12	660.16	191.64	1060.82	377.52
39	ER11a	ExonRegion	0	294.89	362.45	509.06	676.58	196.53	1197.00	407.72
40	E11a_E12a	KnownJunction	0	270.03	339.30	480.17	600.56	181.08	1186.59	365.09
41	ER12a	ExonRegion	0	248.83	313.94	475.36	566.67	173.06	1019.18	337.27
42	E12a_E13a	KnownJunction	0	220.91	243.33	432.71	427.66	164.00	901.95	288.84
43	E12a_E14a	NovelJunction	0	10.61	13.98	4.73	40.56	0.00	65.28	11.75
44	ER13a	ExonRegion	0	349.30	303.00	550.45	459.67	181.98	975.53	326.88
45	E13a_E14a	KnownJunction	0	297.80	325.32	489.74	494.14	178.08	1134.14	339.15
46	ER14a	ExonRegion	0	427.93	330.07	624.36	555.82	226.43	1149.81	401.80
47	E14a_E15a	KnownJunction	0	520.99	308.69	704.92	547.92	222.58	1019.81	427.02
48	E14a_E16a	NovelJunction	1	4.79	6.28	18.08	29.61	2.12	60.06	2.97
49	ER15a	ExonRegion	0	383.71	331.15	542.69	520.35	174.87	1171.59	405.18
50	E15a_E16a	KnownJunction	0	359.67	290.30	496.90	471.71	164.53	964.50	333.74
51	ER16a	ExonRegion	0	421.95	344.60	577.69	572.84	220.52	1256.46	427.29
52	E16a_E17a	KnownJunction	0	169.85	202.18	233.50	354.73	116.44	666.08	192.51
53	E17a_E18a	KnownJunction	0	234.71	206.62	283.79	339.75	103.78	757.33	173.51
54	ER17a	ExonRegion	0	305.50	308.64	398.30	512.22	147.35	1077.17	292.55
55	ER18a	ExonRegion	0	399.48	278.66	472.53	533.93	168.10	1139.12	301.45
56	E18a_E19a	KnownJunction	0	361.87	210.78	473.76	456.43	148.00	927.51	289.14
57	ER19a	ExonRegion	0	330.62	253.79	427.56	447.00	155.58	1004.71	285.13
58	E19a_E20a	KnownJunction	0	350.19	242.80	469.18	462.36	209.09	1073.97	333.58
59	E20_Aa	NovelBoundary	1	176.45	1.18	227.87	0.00	0.00	1.42	0.79
60	ER20a	ExonRegion	0	350.17	291.90	543.99	597.08	215.30	1293.69	376.99
61	E20a_E21a	KnownJunction	0	259.09	265.79	393.32	589.96	202.22	1121.62	335.77
62	ER21a	ExonRegion	0	306.71	318.60	487.15	594.89	218.46	1137.12	373.32
63	E21a_E22a	KnownJunction	0	262.35	316.78	441.57	548.24	219.90	1051.25	382.32
64	ER22a	ExonRegion	0	312.44	361.52	438.61	624.59	245.80	1159.00	374.09
65	E22a_E23a	KnownJunction	0	358.77	422.37	502.20	748.83	247.15	1342.53	421.75
66	ER23a	ExonRegion	0	354.82	428.94	504.70	726.37	264.86	1343.94	424.72
67	E23a_E24a	KnownJunction	0	336.00	362.70	417.67	617.43	278.43	1143.89	342.21
68	ER24a	ExonRegion	0	425.80	413.93	483.98	684.99	249.10	1330.89	400.30
69	E24a_E25a	KnownJunction	0	396.84	321.33	418.69	553.20	226.40	1133.47	328.48
70	ER25a	ExonRegion	0	407.17	376.16	468.00	636.70	236.01	1289.14	351.68
71	E25a_E26a	KnownJunction	0	369.90	366.49	460.97	586.41	222.81	1336.64	330.45
72	ER26a	ExonRegion	0	387.42	360.49	497.22	569.40	224.68	1308.83	348.76
73	ER26b	ExonRegion	0	385.02	343.04	510.30	554.84	201.46	1313.08	329.00
74	E26b_E27a	KnownJunction	0	339.66	347.33	474.82	550.30	168.86	1280.06	300.16
75	ER27a	ExonRegion	0	266.70	276.79	409.48	479.16	163.41	1162.36	307.18
76	E27a_E28a	KnownJunction	0	227.52	235.68	358.88	429.80	152.17	1078.85	296.04
77	ER28a	ExonRegion	0	236.51	236.69	386.95	397.49	108.28	1031.28	247.80
78	E28a_E29a	KnownJunction	0	206.49	238.12	394.29	362.10	85.36	1028.63	218.83
79	ER29a	ExonRegion	0	241.69	166.93	416.07	291.54	103.32	824.72	196.53
80	E29a_E30a	KnownJunction	0	83.70	55.04	178.72	123.81	79.88	492.53	69.68
81	E29a_E31a	NovelJunction	0	6.11	12.53	11.96	21.59	0.97	58.02	3.94
82	E29a_E32a	NovelJunction	0	2.62	11.06	3.52	14.52	2.05	26.48	1.62
83	ER30a	ExonRegion	0	172.35	74.57	265.14	184.06	111.80	535.06	164.02
84	E30a_E31a	KnownJunction	0	280.41	149.69	402.46	362.18	151.11	722.66	344.53
85	ER31a	ExonRegion	0	187.44	160.83	276.98	322.58	123.30	695.88	188.49
86	E31a_E32a	KnownJunction	1	111.22	107.77	139.35	229.62	38.98	413.84	30.87
87	I31	Intron	0	77.61	35.15	55.30	50.24	10.54	119.98	32.73
88	I31_AR1	ActiveIntronRegion	1	108.74	83.14	106.29	71.99	64.78	264.05	127.78
89	I31_SR3	SilentIntronRegion	0	108.70	44.15	62.73	81.33	13.97	164.13	36.23
90	I31_AR3	ActiveIntronRegion	0	92.25	44.78	70.19	71.31	11.57	209.21	43.83
91	ER32a	ExonRegion	0	585.86	326.20	786.95	607.75	315.44	1680.49	407.66
92	E32_Ab	KnownBoundary	0	696.04	338.11	868.97	709.81	487.75	2152.02	516.30
93	ER32b	ExonRegion	0	551.55	347.61	818.08	731.12	316.87	2432.24	506.71
94	E32_Da	KnownBoundary	0	289.89	374.00	406.62	663.70	169.88	2149.23	275.15
95	ER32c	ExonRegion	0	210.95	172.18	352.21	350.05	150.48	1290.46	249.52