Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 VEPH1 Gene 0 1.04 1.21 0.22 0.11 23.05 0.72 0.55 2 362010 Transcript 0 0 0 0 0 0 0 0 3 392833 Transcript 0 0.00 0.00 0.00 0.00 0.85 0.00 0.00 4 392832 Transcript 0 0.36 0.73 0.44 0.00 27.79 0.29 0.00 5 ER1a ExonRegion 0 0.02 0.00 0.00 0.00 0.03 0.00 0.00 6 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER2a ExonRegion 0 0.72 0.14 0.10 0.00 35.14 0.58 0.00 8 E2a_E3a KnownJunction 0 0.00 1.31 0.78 0.00 20.45 0.00 0.00 9 ER3a ExonRegion 0 1.39 2.41 0.47 0.00 46.94 3.23 1.53 10 E3a_E4a KnownJunction 0 0.00 4.31 0.00 0.00 58.00 1.31 1.49 11 ER4a ExonRegion 0 1.01 4.28 0.71 0.88 56.63 0.66 1.97 12 E4a_E5a KnownJunction 0 1.47 0.00 0.00 0.00 84.17 1.29 1.25 13 ER5a ExonRegion 0 2.32 1.51 0.59 1.62 54.68 1.19 1.40 14 E5_Da NovelBoundary 0 1.03 1.18 0.59 0.00 16.78 0.00 0.00 15 E5a_E6a KnownJunction 0 0.65 2.47 0.00 0.00 30.98 0.00 0.00 16 I5_AR1 ActiveIntronRegion 0 1.03 0.21 0.71 0.14 15.17 0.80 0.47 17 ER6a ExonRegion 0 0.97 2.31 0.00 0.00 31.78 0.54 0.01 18 E6a_E7a KnownJunction 0 0.73 0.00 0.00 0.00 33.63 0.00 0.00 19 ER7a ExonRegion 0 1.34 0.03 0.00 0.00 25.03 0.00 0.49 20 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 13.49 0.00 0.00 21 ER8a ExonRegion 0 0.78 0.81 0.47 0.00 13.54 0.00 0.63 22 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 14.52 0.00 1.50 23 ER9a ExonRegion 0 0.49 1.23 0.00 0.00 13.53 0.89 1.03 24 E9a_E10a KnownJunction 0 2.02 2.52 0.00 0.00 18.47 0.00 0.00 25 ER10a ExonRegion 0 0.33 1.63 0.00 0.00 11.27 0.68 0.26 26 E10a_E11a KnownJunction 0 0.00 1.18 0.00 0.00 6.59 1.05 0.00 27 ER11a ExonRegion 0 0.00 1.08 0.00 0.00 9.33 0.71 0.00 28 E11a_E12a KnownJunction 0 0.00 1.63 0.00 0.00 7.10 0.00 0.00 29 E11a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.85 0.00 0.00 30 ER12a ExonRegion 0 0.00 0.38 0.00 0.00 11.93 0.72 0.00 31 E12a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 15.10 0.00 0.00 32 ER13a ExonRegion 0 0.01 0.00 0.44 0.00 18.47 0.79 0.00 33 E13a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 25.38 0.00 0.00 34 ER14a ExonRegion 0 0.85 0.41 0.00 0.00 17.34 0.00 0.26 35 E14a_E15a KnownJunction 0 0.00 2.65 0.00 0.00 8.41 0.00 0.82 36 ER15a ExonRegion 0 2.21 2.51 0.29 0.00 23.21 0.62 0.71 37 E15_Da KnownBoundary 0 0.70 0.00 0.70 0.00 13.99 0.00 0.00 38 ER15b ExonRegion 0 1.14 0.32 0.21 0.00 15.77 0.48 0.26 39 IG47_AR14 ActiveIntergenicRegion 0 11.90 1.38 26.17 4.72 6.86 2.30 6.63 40 IG47_SR5 SilentIntergenicRegion 0 9.59 1.20 12.64 0.00 6.66 0.24 6.71 41 IG47_AR13 ActiveIntergenicRegion 0 13.24 3.84 20.65 0.74 5.22 3.34 7.03 42 IG47_AR12 ActiveIntergenicRegion 0 6.88 2.87 12.32 1.25 5.01 0.28 2.09 43 IG47_AR11 ActiveIntergenicRegion 0 2.64 0.98 10.67 0.12 1.57 0.36 3.08 44 IG47_AR10 ActiveIntergenicRegion 0 16.58 3.91 29.76 3.19 4.54 2.85 10.03 45 IG47_SR4 SilentIntergenicRegion 0 14.34 3.64 19.87 7.48 0.40 1.23 11.58 46 IG47_AR9 ActiveIntergenicRegion 0 17.21 4.44 20.03 5.58 4.75 1.23 12.23 47 IG47_AR8 ActiveIntergenicRegion 0 14.41 6.07 16.77 3.74 4.86 1.38 11.47 48 IG47_AR7 ActiveIntergenicRegion 0 12.89 2.71 12.99 2.89 3.06 1.23 10.61 49 IG47_AR6 ActiveIntergenicRegion 0 9.53 2.43 10.77 0.00 0.00 1.23 7.42 50 IG47_AR1 ActiveIntergenicRegion 0 10.83 3.92 11.39 1.92 1.65 0.29 9.57