Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SCHIP1	Gene	0	45.08	78.63	144.92	383.76	105.81	91.57	78.43
2	406623	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	337808	Transcript	0	28.44	44.48	84.80	235.48	38.43	57.13	36.97
4	ER1a	ExonRegion	0	0.00	0.00	0.00	0.04	0.00	0.00	0.00
5	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	ER2a	ExonRegion	0	10.06	49.07	33.51	203.87	5.66	44.22	18.39
8	E2a_E3a	KnownJunction	0	28.04	55.70	89.21	322.25	20.96	66.36	46.29
9	I2_AR1	ActiveIntronRegion	1	6.76	6.72	32.59	23.60	0.16	1.48	0.99
10	I2_SR2	SilentIntronRegion	1	10.82	9.94	48.18	19.43	0.53	1.21	2.22
11	I2_AR2	ActiveIntronRegion	1	19.27	6.90	51.72	23.10	0.35	0.00	1.84
12	I2_SR4	SilentIntronRegion	1	6.77	3.80	32.10	12.24	0.53	0.86	1.31
13	I2_AR6	ActiveIntronRegion	1	10.41	11.75	33.28	14.02	0.63	1.14	0.60
14	I2_SR5	SilentIntronRegion	1	10.30	5.44	33.62	13.62	0.29	1.97	1.31
15	I2_AR7	ActiveIntronRegion	1	10.84	3.39	36.86	11.64	0.29	0.33	1.59
16	I2_AR8	ActiveIntronRegion	1	11.74	5.79	44.85	12.50	0.60	1.07	2.72
17	I2_SR6	SilentIntronRegion	1	11.29	2.17	34.47	7.52	1.35	0.94	1.71
18	I2_AR9	ActiveIntronRegion	1	18.45	4.03	52.93	15.82	0.80	3.58	3.05
19	I2_SR7	SilentIntronRegion	1	10.07	4.11	30.77	10.86	0.67	1.85	1.08
20	ER3a	ExonRegion	0	29.59	114.19	134.37	463.82	70.72	109.22	101.69
21	E3a_E4a	KnownJunction	1	29.84	131.25	145.37	405.20	102.01	111.00	113.92
22	E3a_E6a	NovelJunction	1	4.94	4.78	2.79	21.21	0.00	0.00	0.00
23	E3a_E7a	NovelJunction	1	1.49	6.86	9.38	79.35	4.26	19.89	0.00
24	ER4a	ExonRegion	0	36.01	124.24	148.05	517.87	132.20	99.05	123.16
25	E4a_E5a	KnownJunction	0	42.08	87.48	131.72	367.30	178.82	68.55	125.90
26	E4a_E6a	NovelJunction	0	2.82	8.56	9.04	51.53	0.00	10.13	10.58
27	ER5a	ExonRegion	0	93.52	132.43	307.95	709.22	274.52	162.61	180.06
28	E5_Da	NovelBoundary	0	15.66	6.65	18.11	37.47	8.71	1.66	5.07
29	E5a_E6a	KnownJunction	0	121.05	127.63	396.06	790.11	255.36	181.38	223.87
30	ER6a	ExonRegion	0	81.53	111.22	257.20	589.35	306.27	131.05	160.78
31	E6a_E7a	KnownJunction	0	32.48	89.32	111.97	406.31	135.90	66.81	84.53
32	ER7a	ExonRegion	0	33.50	101.25	137.76	481.86	151.44	97.49	113.22
33	E7a_E8a	KnownJunction	0	35.67	102.88	160.80	514.24	132.95	116.23	123.01
34	E8_Aa	NovelBoundary	0	13.50	3.97	25.49	23.92	5.39	7.80	4.10
35	ER8a	ExonRegion	0	45.41	120.04	183.86	517.66	163.00	119.75	124.92
36	E8_Da	KnownBoundary	0	59.65	118.09	188.52	512.54	221.31	131.94	110.19
37	ER8b	ExonRegion	0	75.66	73.17	216.46	415.80	127.13	117.95	83.21