Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AC083906.23	Gene	0	6.33	14.30	11.13	15.46	34.95	7.77	6.42
2	304751	Transcript	0	4.27	9.96	7.25	10.21	4.97	4.66	5.75
3	ER1a	ExonRegion	0	0.00	1.87	1.04	6.78	2.03	1.88	0.00
4	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	I1	Intron	0	3.50	9.58	7.41	5.05	2.86	10.82	4.36
6	I1_AR1	ActiveIntronRegion	0	2.65	8.81	8.34	2.77	2.92	5.84	2.36
7	I1_SR1	SilentIntronRegion	0	5.05	11.01	5.77	9.17	2.76	19.86	7.99
8	E2_Aa	NovelBoundary	0	7.04	13.53	16.22	15.14	5.42	16.08	6.31
9	ER2a	ExonRegion	0	1.06	3.05	4.04	0.00	0.64	0.00	1.07
10	E2a_E3a	KnownJunction	1	6.29	40.48	15.26	18.75	6.85	11.36	14.72
11	I2_AR1	ActiveIntronRegion	0	3.71	7.99	7.35	8.78	4.58	3.09	4.53
12	E3_Aa	NovelBoundary	0	1.37	4.33	12.44	2.57	0.00	7.56	0.87
13	ER3a	ExonRegion	0	1.65	0.52	2.57	1.17	1.90	1.15	2.15
14	E3_Da	NovelBoundary	0	3.76	7.83	3.26	1.33	1.18	0.00	6.25
15	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	I3	Intron	0	2.66	7.56	5.15	2.03	2.81	2.12	4.02
17	I3_AR1	ActiveIntronRegion	1	4.38	13.12	10.43	1.25	6.07	0.00	2.77
18	I3_AR2	ActiveIntronRegion	1	3.59	14.61	9.75	1.70	4.03	0.58	4.68
19	I3_AR3	ActiveIntronRegion	0	4.10	10.30	6.86	2.56	3.74	3.23	6.74
20	ER4a	ExonRegion	0	2.79	5.50	3.76	3.58	2.73	5.78	4.63
21	E4a_E5a	KnownJunction	0	5.29	9.35	5.76	3.31	1.01	4.56	6.16
22	E5a_E6a	KnownJunction	0	8.33	26.67	16.27	28.34	2.17	13.53	16.72
23	E6_Aa	NovelBoundary	0	21.25	47.45	38.63	31.83	12.96	14.28	43.21
24	ER5a	ExonRegion	0	5.05	10.93	5.64	11.22	1.51	3.51	7.08
25	ER6a	ExonRegion	0	8.31	9.44	11.40	12.96	4.43	7.02	7.79
26	E6_Da	NovelBoundary	0	10.05	12.03	18.58	20.62	6.55	24.01	12.96
27	E6a_E7a	KnownJunction	0	7.19	11.48	9.86	12.49	0.00	1.05	9.87
28	E7_Aa	NovelBoundary	0	5.27	7.96	5.17	4.47	33.10	20.85	4.37
29	ER7a	ExonRegion	0	4.29	11.95	9.83	10.18	2.01	9.83	8.12
30	E7_Da	NovelBoundary	0	4.82	6.07	6.83	11.62	1.15	12.76	6.86
31	E7a_E8a	KnownJunction	0	1.47	2.89	3.98	5.85	0.99	1.66	1.91
32	I7	Intron	0	6.09	8.58	8.96	7.09	3.48	8.55	4.08
33	I7_SR1	SilentIntronRegion	0	2.13	4.18	3.50	4.32	1.46	9.30	3.43
34	I7_AR1	ActiveIntronRegion	0	7.41	10.40	10.88	8.33	4.09	9.05	4.49
35	I7_SR2	SilentIntronRegion	0	8.11	7.40	9.84	5.79	4.76	1.62	2.76
36	ER8a	ExonRegion	0	5.23	8.58	7.53	17.22	3.64	4.14	5.98
37	E8a_E9a	KnownJunction	0	7.93	8.35	12.67	22.59	1.11	4.64	4.50
38	ER9a	ExonRegion	0	7.77	18.17	13.63	19.16	53.45	9.08	7.05
39	IG18_AR10	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.90	0.00	9.18	0.00