Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	DIRC2	Gene	0	52.92	33.88	103.36	70.34	62.56	78.99	155.15
2	324630	Transcript	0	1.64	0.01	1.12	1.54	2.90	0.87	1.01
3	261038	Transcript	0	58.34	29.69	126.38	76.52	75.87	73.23	178.03
4	ER1a	ExonRegion	0	6.06	13.02	9.92	25.48	6.35	28.66	28.94
5	E1a_E2a	KnownJunction	0	29.07	37.91	48.18	67.05	47.60	80.18	105.64
6	ER2a	ExonRegion	0	35.37	46.05	80.98	72.52	52.48	130.32	161.15
7	E2a_E3a	KnownJunction	1	28.31	50.68	95.15	82.28	52.51	159.83	194.25
8	ER3a	ExonRegion	0	90.39	58.20	157.91	130.46	96.27	149.80	260.38
9	E3a_E4a	KnownJunction	0	184.66	82.99	291.30	164.55	97.97	221.93	395.05
10	ER4a	ExonRegion	0	121.25	55.45	181.87	113.28	132.10	126.61	266.86
11	E4a_E5a	KnownJunction	0	78.68	46.26	109.07	66.43	87.79	71.05	174.08
12	ER5a	ExonRegion	0	72.59	37.89	138.07	76.45	112.44	85.63	251.00
13	E5a_E6a	KnownJunction	0	53.29	36.02	141.49	69.57	90.85	121.08	286.28
14	ER6a	ExonRegion	0	56.92	42.77	135.91	85.62	81.28	99.13	279.07
15	E6a_E7a	KnownJunction	0	64.24	42.51	138.04	85.04	73.15	63.68	211.88
16	ER7a	ExonRegion	0	81.18	52.52	187.15	87.08	118.09	84.41	292.53
17	E7a_E8a	KnownJunction	0	1.94	0.00	1.41	1.68	2.31	1.45	1.29
18	E7a_E9a	KnownJunction	0	61.15	37.10	144.82	65.86	78.82	82.09	203.59
19	E8_Aa	NovelBoundary	0	36.00	21.10	35.72	17.77	21.76	27.55	20.25
20	ER8a	ExonRegion	0	1.35	0.01	0.83	1.40	3.49	0.30	0.73
21	ER9a	ExonRegion	0	71.15	30.25	150.96	80.85	81.08	67.36	189.87
22	E9a_E10a	KnownJunction	1	47.17	17.58	96.91	88.51	83.94	63.06	180.59
23	E10_Aa	NovelBoundary	1	21.73	1.37	36.87	3.12	1.18	0.00	0.00
24	ER10a	ExonRegion	0	53.89	33.84	112.84	70.87	59.66	80.42	138.07
25	IG37	Intergenic	0	5.73	5.39	16.55	12.27	4.28	17.60	23.61
26	IG37_AR1	ActiveIntergenicRegion	0	13.97	13.54	46.42	25.48	14.53	32.73	43.01
27	IG37_SR1	SilentIntergenicRegion	0	12.41	2.90	45.60	19.83	15.70	26.28	42.40
28	IG37_AR2	ActiveIntergenicRegion	0	8.42	10.67	33.52	23.87	8.80	33.70	37.33
29	IG37_SR2	SilentIntergenicRegion	0	2.76	3.84	12.13	15.62	3.44	34.69	23.12
30	IG37_AR3	ActiveIntergenicRegion	0	2.35	5.06	9.85	7.92	4.52	9.33	25.22
31	IG37_SR3	SilentIntergenicRegion	0	3.76	3.57	13.55	6.34	3.89	5.10	18.68
32	IG37_AR4	ActiveIntergenicRegion	0	3.98	1.23	17.60	7.78	2.70	3.61	20.21
33	IG37_SR4	SilentIntergenicRegion	0	6.62	6.27	19.77	8.88	3.27	8.47	27.40
34	IG37_AR5	ActiveIntergenicRegion	0	9.38	8.40	21.46	12.72	6.13	22.50	31.05
35	IG37_SR5	SilentIntergenicRegion	0	19.25	8.05	34.14	19.16	10.84	36.26	37.57
36	IG37_AR6	ActiveIntergenicRegion	0	5.61	7.93	15.94	20.17	4.60	15.97	17.32
37	IG37_SR6	SilentIntergenicRegion	0	14.65	9.60	36.48	23.96	8.56	45.86	45.30
38	IG37_AR8	ActiveIntergenicRegion	0	14.61	14.56	43.47	34.28	11.29	52.34	69.89
39	IG37_AR9	ActiveIntergenicRegion	0	14.00	27.94	43.88	51.13	21.24	63.75	93.02
40	IG37_SR7	SilentIntergenicRegion	0	10.08	15.13	32.54	45.25	13.09	50.02	55.91
41	IG37_AR10	ActiveIntergenicRegion	0	9.39	10.63	26.99	30.08	7.57	49.25	48.31