Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	IFRD2	Gene	0	131.85	129.82	295.36	259.80	133.01	88.83	170.00
2	336089	Transcript	0	126.50	139.92	299.21	279.87	142.09	91.38	186.15
3	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	ER2a	ExonRegion	0	2.77	0.71	1.19	0.73	0.63	1.06	1.57
5	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	ER3a	ExonRegion	0	0.63	0.00	0.00	0.00	0.00	0.00	0.00
7	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	ER4a	ExonRegion	1	13.38	42.45	31.94	106.39	19.84	46.55	43.32
9	E4a_E5a	KnownJunction	1	42.88	105.85	123.61	239.00	65.95	85.60	122.35
10	ER5a	ExonRegion	0	53.07	126.39	174.52	253.14	67.95	94.71	142.61
11	E5_Da	NovelBoundary	0	7.98	37.83	9.97	41.72	3.23	35.70	12.30
12	E5a_E6a	KnownJunction	0	95.98	149.33	210.18	225.34	91.15	89.40	121.03
13	E5a_E7a	NovelJunction	0	8.24	11.74	9.47	17.69	0.90	12.35	19.16
14	E6_Aa	NovelBoundary	0	8.71	41.11	21.21	56.27	1.91	43.25	9.03
15	ER6a	ExonRegion	0	137.86	172.87	312.94	289.75	134.57	115.92	173.47
16	E6_Da	NovelBoundary	0	13.84	40.35	19.56	60.14	3.32	30.58	17.66
17	E6a_E7a	KnownJunction	0	168.20	162.67	375.80	317.89	132.78	113.07	212.26
18	E7_Aa	NovelBoundary	0	16.51	35.10	16.60	43.13	6.29	41.22	6.21
19	ER7a	ExonRegion	0	198.24	219.35	423.60	401.88	176.60	151.19	251.81
20	E7_Da	NovelBoundary	0	13.10	24.22	11.96	38.77	1.04	24.66	8.76
21	E7a_E8a	KnownJunction	0	290.05	226.56	587.45	477.59	273.06	148.18	336.20
22	E7a_E12a	NovelJunction	1	0.65	0.00	0.00	8.99	0.00	19.38	0.87
23	E8_Aa	NovelBoundary	0	10.68	30.53	14.93	33.73	0.00	45.13	12.67
24	ER8a	ExonRegion	0	204.69	231.19	468.89	463.47	231.35	139.79	299.14
25	E8a_E9a	KnownJunction	0	159.54	185.63	459.33	430.45	199.55	150.19	271.16
26	E8a_E12a	NovelJunction	0	3.49	7.93	5.66	13.41	0.00	20.37	6.42
27	ER9a	ExonRegion	0	174.71	189.18	457.58	441.50	193.19	128.03	297.35
28	E9a_E10a	KnownJunction	0	171.51	169.42	380.08	395.48	236.36	88.95	274.85
29	E9a_E12a	NovelJunction	0	11.65	24.80	26.79	74.20	6.48	38.67	20.90
30	E10_Aa	NovelBoundary	0	13.19	37.59	30.97	24.46	7.08	16.78	20.44
31	ER10a	ExonRegion	0	132.03	185.78	362.36	354.14	185.98	110.20	238.03
32	E10a_E11a	KnownJunction	0	94.05	143.23	278.01	251.49	95.23	87.47	189.05
33	E10a_E12a	NovelJunction	0	4.66	18.34	4.48	36.60	2.90	9.76	2.38
34	ER11a	ExonRegion	0	108.02	171.38	290.39	270.17	163.74	91.12	187.51
35	E11a_E12a	KnownJunction	0	137.56	179.43	373.10	281.75	230.87	77.85	221.00
36	ER12a	ExonRegion	0	155.65	197.74	403.36	385.51	196.07	129.47	276.40
37	E12_Da	NovelBoundary	0	14.69	35.73	22.89	97.58	9.31	56.04	16.80
38	E12a_E13a	KnownJunction	0	132.89	197.35	363.56	397.43	154.55	99.75	243.28
39	E13_Aa	NovelBoundary	0	19.46	44.66	17.65	71.20	5.37	67.83	24.46
40	ER13a	ExonRegion	0	179.37	222.19	422.37	454.25	251.21	143.57	331.38
41	E13_Da	NovelBoundary	0	12.58	32.71	22.53	83.90	4.03	46.10	21.34
42	E13a_E14a	KnownJunction	0	181.54	182.88	429.46	420.16	263.45	143.41	293.95
43	E14_Aa	NovelBoundary	1	89.27	21.65	186.81	68.84	3.04	66.44	19.98
44	ER14a	ExonRegion	0	234.01	200.68	514.08	408.95	261.53	137.57	276.79
45	E14_Da	NovelBoundary	0	40.41	63.52	67.89	125.62	52.38	107.41	69.64
46	E14a_E15a	KnownJunction	0	264.02	151.24	532.75	337.58	211.97	102.56	255.49
47	I14	Intron	0	19.24	24.75	31.11	59.21	9.87	33.79	14.77
48	I14_AR1	ActiveIntronRegion	0	19.50	25.04	31.52	60.00	10.00	34.25	14.96
49	E15_Aa	NovelBoundary	0	52.74	54.96	63.60	118.77	24.57	45.59	34.15
50	ER15a	ExonRegion	0	209.41	104.34	401.22	232.32	140.83	82.92	152.21