Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	C3orf63	Gene	0	135.56	42.29	172.68	44.59	132.26	52.01	146.94
2	355628	Transcript	0	54.43	31.73	77.56	27.73	72.65	35.06	78.87
3	296313	Transcript	0	30.04	28.58	53.64	11.92	18.63	26.96	41.88
4	ER1a	ExonRegion	0	16.62	29.66	23.82	22.54	15.27	19.11	20.90
5	E1_Da	NovelBoundary	1	13.12	39.49	17.36	19.32	10.70	13.86	8.99
6	E1a_E2a	KnownJunction	0	47.08	51.23	78.85	34.46	64.57	35.51	62.87
7	I1_AR1	ActiveIntronRegion	0	12.45	18.80	11.50	11.42	5.35	9.40	4.56
8	ER2a	ExonRegion	0	79.94	55.63	125.25	51.23	63.29	42.68	95.61
9	E2_Ab	KnownBoundary	0	94.33	53.59	154.28	39.69	67.94	48.11	102.58
10	ER2b	ExonRegion	0	90.52	72.44	146.43	51.55	93.82	57.81	104.18
11	E2a_E3a	KnownJunction	0	100.97	75.71	167.21	63.07	112.04	54.89	106.08
12	ER3a	ExonRegion	0	135.95	74.32	215.28	72.59	104.00	63.94	152.77
13	E3a_E4a	KnownJunction	0	100.84	46.68	167.24	44.08	74.76	64.00	127.01
14	E3a_E5a	NovelJunction	0	7.19	4.97	10.65	2.93	2.19	10.64	0.00
15	ER4a	ExonRegion	0	113.22	48.96	174.83	37.96	96.94	56.50	115.67
16	E4a_E5a	KnownJunction	0	152.21	48.92	202.95	47.79	91.08	62.01	117.82
17	ER5a	ExonRegion	0	158.09	29.38	224.45	41.54	136.29	59.34	148.70
18	E5a_E6a	KnownJunction	1	167.20	24.38	226.26	44.02	144.06	60.65	163.87
19	ER6a	ExonRegion	0	181.92	43.65	222.49	43.70	131.88	41.56	145.42
20	E6a_E7a	KnownJunction	0	123.62	34.39	175.25	32.67	108.72	20.93	122.46
21	ER7a	ExonRegion	0	114.39	44.49	171.99	22.19	101.60	26.02	137.38
22	E7a_E8a	KnownJunction	1	77.04	32.87	138.62	15.90	87.37	13.37	103.49
23	ER8a	ExonRegion	0	98.29	36.67	187.47	18.20	99.33	25.94	142.63
24	E8a_E9a	KnownJunction	0	97.92	33.02	165.19	20.24	112.68	35.51	126.15
25	ER9a	ExonRegion	0	127.14	29.56	190.52	28.70	107.61	39.66	152.43
26	E9a_E10a	KnownJunction	0	155.85	33.73	183.38	28.72	99.80	32.00	127.05
27	ER10a	ExonRegion	0	178.11	47.38	262.72	55.27	130.99	46.61	162.99
28	E10a_E11a	KnownJunction	0	195.94	63.13	254.69	56.13	129.58	70.46	167.42
29	ER11a	ExonRegion	0	233.62	55.98	280.81	58.03	160.60	57.06	185.99
30	E11a_E12a	KnownJunction	0	202.47	53.17	268.06	56.16	142.84	44.09	181.44
31	E11a_E14a	NovelJunction	1	45.68	12.58	30.38	13.27	1.18	14.66	2.34
32	ER12a	ExonRegion	0	179.75	49.93	219.60	46.65	151.38	42.09	168.04
33	E12a_E13a	KnownJunction	0	198.58	40.67	208.15	29.94	122.34	35.59	133.65
34	ER13a	ExonRegion	0	221.96	42.50	244.69	38.59	135.20	51.32	176.15
35	E13a_E14a	KnownJunction	0	189.10	50.94	252.34	57.46	194.77	61.02	187.54
36	ER14a	ExonRegion	0	181.08	42.13	239.63	49.03	135.05	56.00	149.66
37	E14a_E15a	KnownJunction	0	248.85	53.96	289.92	96.42	231.45	81.10	228.07
38	ER15a	ExonRegion	0	162.42	54.93	179.15	56.01	179.52	55.07	192.43
39	E15a_E16a	KnownJunction	0	121.67	31.63	149.49	36.68	159.83	59.52	187.94
40	ER16a	ExonRegion	0	139.96	45.37	169.63	43.48	170.32	80.50	203.61
41	E16a_E17a	KnownJunction	0	104.26	47.55	130.84	35.52	147.81	53.97	167.99
42	E16a_E18a	KnownJunction	1	30.04	28.58	53.64	11.92	18.63	26.96	41.88
43	I16_AR2	ActiveIntronRegion	0	12.87	3.95	12.07	9.00	3.21	5.17	8.37
44	ER17a	ExonRegion	0	69.43	17.41	91.86	22.94	109.29	39.50	108.20
45	E17a_E18a	KnownJunction	1	31.58	7.46	43.92	10.78	59.06	23.91	53.86
46	I17_AR3	ActiveIntronRegion	0	20.50	8.48	19.63	5.21	10.18	3.91	22.44
47	I17_SR3	SilentIntronRegion	0	22.13	12.01	13.64	4.75	12.62	3.93	21.34
48	I17_AR4	ActiveIntronRegion	1	36.99	21.06	44.58	11.11	52.11	17.56	49.45
49	E18_Aa	NovelBoundary	0	39.27	25.77	57.58	19.42	69.32	12.94	53.28
50	ER18a	ExonRegion	0	158.64	50.08	198.57	50.71	175.58	61.96	196.13
51	E18a_E19a	KnownJunction	0	212.01	20.28	204.25	35.44	152.79	41.67	138.13
52	ER19a	ExonRegion	0	206.50	31.43	223.11	39.90	161.75	47.80	155.71
53	E19a_E20a	KnownJunction	0	226.08	35.81	237.47	49.03	133.55	58.42	159.34
54	ER20a	ExonRegion	0	173.68	36.87	193.49	51.62	148.42	49.09	160.32
55	E20_Da	NovelBoundary	1	22.80	13.74	6.51	6.61	8.88	0.00	11.02
56	E20a_E21a	KnownJunction	0	114.63	30.24	145.86	41.48	146.57	38.00	120.91
57	ER21a	ExonRegion	0	120.47	30.03	142.47	45.37	121.46	44.20	147.29
58	E21a_E22a	KnownJunction	0	95.97	32.52	140.60	35.62	109.69	40.36	123.64
59	ER22a	ExonRegion	0	114.82	32.69	145.22	42.01	130.97	53.59	152.74
60	E22a_E23a	KnownJunction	0	96.48	34.94	149.26	45.24	127.69	61.51	145.78
61	ER23a	ExonRegion	0	97.38	32.09	124.58	41.32	128.64	49.37	119.83
62	E23a_E24a	KnownJunction	0	6.59	1.10	5.55	0.00	17.50	1.66	11.87
63	I23	Intron	1	27.49	11.81	31.91	13.91	34.89	13.15	37.10
64	I23_AR1	ActiveIntronRegion	1	27.54	11.84	31.97	13.94	34.96	13.17	37.17
65	E24_Aa	NovelBoundary	1	86.19	19.55	142.42	38.01	103.28	62.52	126.86
66	ER24a	ExonRegion	0	97.09	38.77	123.91	47.66	151.23	68.85	144.11
67	E24_Da	KnownBoundary	1	51.92	21.38	95.35	35.92	79.60	73.75	77.66
68	ER24b	ExonRegion	0	32.11	13.16	48.34	16.64	49.22	30.76	42.68
69	IG2	Intergenic	0	26.09	7.67	38.38	10.74	66.17	17.21	36.97
70	IG2_AR1	ActiveIntergenicRegion	0	26.14	7.69	38.44	10.75	66.28	17.24	37.03