Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SFMBT1	Gene	0	29.61	30.01	49.87	43.25	55.19	17.58	26.46
2	358080	Transcript	0	1.03	2.92	0.75	0.00	3.02	0.00	3.51
3	296295	Transcript	0	0.00	0.00	0.89	1.68	0.00	0.00	0.00
4	394752	Transcript	0	0	0	0	0	0	0	0
5	394750	Transcript	0	0.89	0.57	1.62	1.81	0.38	0.15	1.44
6	IG31_AR24	ActiveIntergenicRegion	0	7.08	8.09	18.00	6.99	17.82	2.52	10.48
7	IG31_AR18	ActiveIntergenicRegion	0	2.31	0.08	6.37	4.90	7.77	6.38	8.01
8	IG31_AR17	ActiveIntergenicRegion	0	2.31	1.21	5.67	3.59	5.67	6.13	8.10
9	IG31_SR11	SilentIntergenicRegion	0	2.31	1.21	5.37	2.67	6.59	6.74	8.10
10	ER1a	ExonRegion	1	20.19	7.13	10.24	8.78	7.20	3.63	3.18
11	E1a_E3a	KnownJunction	0	1.03	2.92	0.75	0.00	3.02	0.00	3.51
12	E1a_E4a	KnownJunction	1	35.97	14.40	25.74	22.38	9.36	9.65	7.41
13	ER2a	ExonRegion	0	0.41	1.15	2.23	0.40	0.77	0.29	2.87
14	E2a_E3a	KnownJunction	0	1.37	0.00	1.01	3.22	0.00	0.00	0.00
15	ER3a	ExonRegion	0	5.97	4.20	7.60	5.98	8.76	1.99	6.05
16	E3a_E4a	KnownJunction	0	0.00	3.86	3.38	2.82	2.19	2.63	0.00
17	I3_AR6	ActiveIntronRegion	0	4.34	3.39	13.19	3.17	2.75	1.54	5.95
18	ER4a	ExonRegion	1	45.41	40.94	50.96	45.62	39.38	28.48	19.87
19	E4a_E5a	KnownJunction	0	26.97	40.98	51.06	57.92	35.25	25.00	18.29
20	ER5a	ExonRegion	0	33.20	38.36	56.45	54.00	41.27	20.92	22.82
21	E5a_E6a	KnownJunction	1	30.21	37.83	55.14	41.86	42.12	6.86	19.16
22	ER6a	ExonRegion	0	28.38	37.88	54.05	44.62	46.29	18.38	23.80
23	E6a_E7a	KnownJunction	0	24.40	43.77	45.21	47.98	46.15	19.24	25.75
24	ER7a	ExonRegion	0	22.96	29.46	44.68	39.02	61.43	20.02	29.05
25	E7a_E8a	KnownJunction	0	31.59	31.55	46.82	40.85	63.19	17.82	29.06
26	ER8a	ExonRegion	0	40.29	37.34	65.82	59.82	75.11	23.36	31.33
27	E8a_E9a	KnownJunction	0	38.97	46.68	57.91	60.49	70.36	19.19	29.67
28	ER9a	ExonRegion	0	44.02	47.94	75.90	59.50	67.88	21.13	37.71
29	E9a_E10a	KnownJunction	0	37.59	41.38	70.34	49.41	70.66	24.58	31.41
30	ER10a	ExonRegion	0	33.28	45.25	60.35	41.37	65.07	15.43	31.75
31	E10a_E11a	KnownJunction	1	27.84	41.14	37.78	37.11	49.66	9.43	33.58
32	ER11a	ExonRegion	0	26.28	42.48	47.89	49.79	55.17	15.95	34.86
33	E11a_E12a	KnownJunction	0	16.31	40.85	31.76	46.00	31.51	14.07	29.42
34	ER12a	ExonRegion	0	17.18	32.23	51.96	44.06	50.15	16.74	26.18
35	E12a_E13a	KnownJunction	0	22.65	18.21	60.60	51.74	50.21	22.40	29.01
36	ER13a	ExonRegion	0	17.96	25.30	45.72	54.96	47.37	17.40	27.63
37	E13a_E14a	KnownJunction	0	14.60	25.48	49.89	45.89	42.35	21.17	15.55
38	ER14a	ExonRegion	0	33.42	31.30	62.63	61.66	62.87	17.66	27.73
39	E14a_E15a	KnownJunction	0	36.38	31.74	47.38	34.54	66.32	26.21	25.61
40	ER15a	ExonRegion	0	41.92	33.99	63.91	56.23	85.34	24.92	27.96
41	E15a_E16a	KnownJunction	0	33.96	34.26	59.45	54.72	87.35	13.40	21.64
42	ER16a	ExonRegion	0	36.26	44.54	63.91	58.01	69.27	24.95	31.38
43	E16a_E17a	KnownJunction	0	34.40	37.33	58.24	66.24	61.50	30.31	36.60
44	ER17a	ExonRegion	0	38.04	35.15	66.91	58.93	78.96	21.48	33.23
45	E17a_E18a	KnownJunction	0	32.68	29.08	63.60	39.20	79.05	21.79	26.93
46	E18_Aa	NovelBoundary	0	7.16	1.44	16.40	0.00	3.53	0.00	3.18
47	ER18a	ExonRegion	0	37.53	23.24	67.05	45.75	83.99	16.19	41.19
48	E18a_E19a	KnownJunction	1	43.99	12.27	71.84	36.79	76.93	12.35	43.57
49	ER19a	ExonRegion	0	49.67	36.42	82.26	49.69	77.30	15.75	48.72
50	E19a_E20a	KnownJunction	0	41.39	30.32	70.41	36.19	62.01	13.24	32.43
51	ER20a	ExonRegion	0	42.06	25.85	74.03	43.92	63.56	17.56	32.87
52	E20a_E21a	KnownJunction	0	27.04	22.25	45.64	47.57	36.93	14.74	24.36
53	ER21a	ExonRegion	0	26.85	35.27	54.56	47.64	70.23	27.65	31.31
54	E21a_E22a	KnownJunction	0	24.75	33.60	47.85	53.80	81.54	37.06	31.84
55	E21a_E23a	KnownJunction	0	0.00	0.00	0.89	1.68	0.00	0.00	0.00
56	ER22a	ExonRegion	0	28.79	38.56	53.92	51.85	90.65	23.39	33.72
57	E22a_E23a	KnownJunction	0	28.12	43.82	49.13	56.16	87.92	27.20	39.04
58	ER23a	ExonRegion	0	33.64	34.33	53.80	54.55	71.53	22.05	30.72
59	IG30	Intergenic	0	10.18	5.82	13.60	10.15	22.74	4.58	12.23
60	IG30_AR4	ActiveIntergenicRegion	0	12.37	7.57	21.43	11.68	27.17	6.54	14.22
61	IG30_SR4	SilentIntergenicRegion	0	10.77	4.58	19.84	8.85	14.98	3.09	11.41
62	IG30_AR3	ActiveIntergenicRegion	0	17.71	8.68	20.53	15.71	27.53	6.27	17.97
63	IG30_SR3	SilentIntergenicRegion	0	15.01	11.48	21.24	19.49	31.58	4.50	20.93
64	IG30_AR2	ActiveIntergenicRegion	0	14.13	7.33	14.53	15.55	35.86	8.15	18.58
65	IG30_SR2	SilentIntergenicRegion	0	3.78	4.08	7.36	8.31	17.76	3.51	7.92
66	IG30_AR1	ActiveIntergenicRegion	0	3.93	3.16	4.29	3.14	23.70	2.39	6.37