Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CRELD1	Gene	0	46.35	102.35	23.88	133.14	25.17	97.44	30.93
2	326434	Transcript	0	7.04	34.26	3.97	61.20	0.00	30.36	3.27
3	383811	Transcript	0	0	0	0	0	0	0	0
4	295982	Transcript	0	25.00	48.29	13.78	75.94	23.15	28.43	8.38
5	397170	Transcript	0	0.10	0.10	0.00	0.05	0.00	0.00	0.00
6	ER1a	ExonRegion	0	0.00	0.00	0.00	1.12	0.34	0.00	0.00
7	ER1b	ExonRegion	0	11.25	39.60	5.90	83.72	4.80	43.54	2.64
8	E1_Da	KnownBoundary	0	10.20	35.86	4.53	67.84	0.99	55.88	1.49
9	E1a_E1c	KnownJunction	0	7.04	34.26	3.97	61.20	0.00	30.36	3.27
10	ER1c	ExonRegion	1	36.37	56.92	16.18	88.25	4.50	83.64	7.20
11	E1_Ac	KnownBoundary	1	57.21	42.38	19.57	70.44	2.14	68.42	4.76
12	ER1d	ExonRegion	0	56.66	95.57	21.49	161.28	12.64	112.52	22.24
13	E1b_E2a	KnownJunction	0	81.01	119.14	35.58	184.90	32.71	128.99	36.29
14	ER2a	ExonRegion	0	71.31	139.21	31.78	159.01	36.70	120.83	45.60
15	E2a_E3a	KnownJunction	0	48.93	136.09	20.61	86.53	22.11	92.03	45.00
16	E2a_E5a	NovelJunction	1	3.40	16.81	10.38	108.82	0.00	23.93	1.46
17	ER3a	ExonRegion	0	40.73	110.77	18.00	71.09	20.20	75.98	33.85
18	E3a_E4a	KnownJunction	0	44.04	102.46	20.51	57.38	16.62	56.60	33.85
19	E3a_E5a	NovelJunction	1	1.52	0.00	3.02	10.46	1.18	13.27	0.00
20	ER4a	ExonRegion	0	33.72	93.98	14.69	68.43	15.08	50.29	33.39
21	E4a_E5a	KnownJunction	0	39.17	89.82	16.63	76.88	12.40	60.65	30.17
22	ER5a	ExonRegion	0	40.68	123.78	16.27	161.77	28.90	111.70	39.63
23	E5a_E6a	KnownJunction	0	61.19	144.97	30.02	184.14	45.23	141.13	55.73
24	ER6a	ExonRegion	0	62.12	171.14	31.83	201.01	44.20	150.33	60.77
25	E6a_E7a	KnownJunction	0	62.44	181.98	31.23	205.49	49.13	183.26	72.62
26	E6a_E8a	NovelJunction	1	6.61	7.54	3.75	62.50	0.00	18.95	0.57
27	E7_Aa	NovelBoundary	1	1.49	6.96	10.33	12.84	2.01	6.00	0.82
28	ER7a	ExonRegion	0	64.31	182.10	35.07	199.97	45.20	168.21	62.68
29	E7a_E8a	KnownJunction	0	57.66	169.63	35.87	189.12	22.85	143.75	49.33
30	ER8a	ExonRegion	0	65.27	165.23	36.54	206.89	51.22	159.21	61.40
31	E8_Da	NovelBoundary	1	7.76	21.70	12.17	22.59	5.60	15.49	1.45
32	E8a_E9a	KnownJunction	0	69.71	183.56	36.83	245.85	49.26	150.64	70.63
33	ER9a	ExonRegion	0	68.61	184.64	40.98	244.74	64.58	161.57	72.33
34	E9a_E10a	KnownJunction	0	4.97	12.77	4.74	11.24	9.96	4.42	5.83
35	E9a_E11a	KnownJunction	0	58.31	129.33	27.04	177.99	50.83	130.41	71.46
36	I9	Intron	1	11.91	24.14	5.81	28.59	8.78	10.13	3.79
37	I9_AR1	ActiveIntronRegion	1	12.86	25.76	6.29	30.96	9.24	11.02	3.99
38	E10_Aa	NovelBoundary	1	48.08	59.77	19.26	62.85	25.40	25.57	8.57
39	ER10a	ExonRegion	1	43.94	67.96	21.77	81.39	25.37	20.60	12.24
40	E10_Da	NovelBoundary	1	43.58	29.53	19.64	34.05	17.87	9.46	6.61
41	E10a_E11a	KnownJunction	0	25.00	48.29	13.78	75.94	23.15	28.43	8.38
42	E11_Aa	NovelBoundary	1	28.41	26.32	13.51	27.66	11.37	14.45	3.84
43	ER11a	ExonRegion	0	59.77	149.48	33.89	191.08	39.76	138.48	48.85
44	E11_Da	KnownBoundary	0	30.04	48.42	14.43	62.53	13.37	39.26	9.85
45	ER11b	ExonRegion	1	25.71	26.15	17.25	52.29	9.91	35.79	8.29
46	E11_Db	NovelBoundary	0	2.60	10.09	3.54	22.21	9.34	6.99	3.32
47	Ix	Intron	0	0.71	0.00	0.63	1.15	11.35	2.36	0.00
48	Ix_AR1	ActiveIntronRegion	0	0.73	0.00	0.65	1.18	11.65	2.42	0.00
49	ER12a	ExonRegion	0	0.10	0.10	0.00	0.05	0.00	0.00	0.00
50	IG48	Intergenic	0	38.21	32.10	52.65	33.99	30.16	30.81	31.65
51	IG48_AR1	ActiveIntergenicRegion	0	38.29	32.16	52.75	34.06	30.22	30.86	31.71