Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ENDOGL1	Gene	0	14.67	6.74	20.14	8.50	50.57	13.16	29.79
2	287675	Transcript	0	16.47	7.57	22.73	9.61	58.31	15.18	33.33
3	358249	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.26	0.00
4	ER1a	ExonRegion	0	1.65	1.06	2.63	1.86	11.11	4.50	2.63
5	E1a_E2a	KnownJunction	0	3.52	8.70	5.66	1.38	30.96	5.44	11.32
6	I1	Intron	0	2.67	1.72	3.54	0.41	8.25	0.21	7.42
7	I1_AR1	ActiveIntronRegion	1	2.68	1.73	3.56	0.41	8.28	0.21	7.46
8	ER2a	ExonRegion	0	5.23	5.30	8.84	4.37	21.66	6.77	21.76
9	E2a_E3a	KnownJunction	0	5.32	5.52	6.05	1.11	13.39	4.53	16.14
10	I2	Intron	1	3.07	0.65	2.82	0.67	10.57	0.14	9.88
11	I2_AR2	ActiveIntronRegion	1	2.90	0.78	3.22	0.00	8.40	0.39	7.74
12	I2_SR2	SilentIntronRegion	1	2.00	0.38	2.81	0.78	11.48	0.38	9.45
13	I2_SR3	SilentIntronRegion	1	3.67	0.52	2.44	1.01	10.98	0.00	11.45
14	I2_AR4	ActiveIntronRegion	1	2.84	0.00	1.54	1.25	8.96	0.00	9.72
15	I2_AR5	ActiveIntronRegion	1	3.41	0.74	3.28	0.38	15.25	0.00	12.79
16	E3_Aa	NovelBoundary	1	5.44	3.15	8.22	0.00	12.43	0.00	21.74
17	ER3a	ExonRegion	0	17.03	7.05	20.19	12.79	64.00	15.40	36.62
18	E3a_E4a	KnownJunction	0	19.54	9.25	37.33	19.07	76.77	14.42	52.60
19	ER4a	ExonRegion	0	25.44	7.76	40.66	11.53	69.46	17.18	46.80
20	E4a_E5a	KnownJunction	0	27.62	9.04	30.06	12.06	58.85	17.55	38.21
21	ER5a	ExonRegion	0	22.93	10.56	29.60	11.07	58.31	14.43	42.90
22	E5a_E6a	KnownJunction	0	16.82	12.45	30.34	5.47	51.09	11.42	36.87
23	ER6a	ExonRegion	0	26.01	10.02	28.44	6.46	57.48	9.94	34.72
24	E6_Da	KnownBoundary	0	31.66	10.48	29.13	9.83	66.21	10.26	28.22
25	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER6b	ExonRegion	0	16.47	7.57	22.73	9.61	58.31	15.18	33.33
27	E6_Db	NovelBoundary	0	5.94	21.41	2.59	8.72	9.01	18.44	7.71
28	I6	Intron	1	2.67	1.78	4.21	1.60	9.78	2.01	8.78
29	I6_AR1	ActiveIntronRegion	0	4.82	2.20	6.03	3.02	18.46	3.58	10.37
30	I6_SR2	SilentIntronRegion	1	2.47	2.77	8.41	1.86	11.86	2.11	16.21
31	I6_AR3	ActiveIntronRegion	1	5.39	4.35	10.27	2.65	24.14	4.54	24.53
32	I6_SR3	SilentIntronRegion	1	2.37	1.72	3.99	1.54	9.45	1.66	8.50
33	I6_AR4	ActiveIntronRegion	1	1.77	3.10	4.11	2.03	8.41	0.48	7.91
34	I6_SR4	SilentIntronRegion	1	2.58	1.25	4.37	2.13	8.35	2.08	7.60
35	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.52	0.00