Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CAPN7	Gene	0	84.57	65.32	120.96	108.45	47.90	126.46	87.74
2	253693	Transcript	0	99.42	82.03	143.63	130.82	59.45	141.72	100.64
3	ER1a	ExonRegion	0	16.05	28.77	20.31	49.44	7.84	43.97	17.35
4	E1a_E2a	KnownJunction	0	33.08	77.63	65.14	115.41	11.18	113.28	38.69
5	ER2a	ExonRegion	0	62.94	87.08	102.28	154.75	33.43	148.76	76.40
6	E2a_E3a	KnownJunction	0	86.57	102.83	146.68	164.12	43.20	163.51	89.60
7	ER3a	ExonRegion	0	83.58	116.75	167.61	186.64	53.92	176.16	113.02
8	E3a_E4a	KnownJunction	0	96.23	137.64	190.69	175.23	62.52	211.64	137.50
9	ER4a	ExonRegion	0	94.53	131.24	180.91	167.79	63.05	200.25	121.96
10	E4a_E5a	KnownJunction	0	83.98	137.98	137.34	154.50	66.99	145.71	104.86
11	ER5a	ExonRegion	0	80.25	95.40	134.11	142.57	65.64	142.98	128.09
12	E5a_E6a	KnownJunction	0	73.34	91.11	107.07	133.13	71.49	114.70	113.45
13	ER6a	ExonRegion	0	94.01	107.17	152.35	157.75	68.96	139.67	153.85
14	E6a_E7a	KnownJunction	0	125.74	105.11	170.32	194.27	67.18	163.13	179.89
15	ER7a	ExonRegion	0	110.29	116.21	153.53	181.31	72.61	177.75	140.32
16	E7a_E8a	KnownJunction	0	106.77	101.64	145.38	173.33	84.33	145.76	134.06
17	E7a_E9a	NovelJunction	0	2.49	9.64	7.83	17.93	0.00	16.99	0.00
18	ER8a	ExonRegion	0	116.54	109.45	167.34	184.25	71.39	159.25	162.51
19	E8a_E9a	KnownJunction	0	123.79	103.98	165.91	144.40	46.47	140.16	105.59
20	ER9a	ExonRegion	0	118.45	112.13	157.43	162.18	71.97	149.90	114.87
21	E9_Da	NovelBoundary	1	40.02	0.00	56.89	4.12	0.00	3.32	4.06
22	E9a_E10a	KnownJunction	0	89.34	110.92	131.70	145.86	77.62	153.99	117.46
23	ER10a	ExonRegion	0	115.76	112.34	184.68	173.66	71.05	185.93	120.97
24	E10a_E11a	KnownJunction	0	90.38	107.48	164.76	182.78	55.40	185.86	113.82
25	ER11a	ExonRegion	0	82.08	91.49	145.57	154.60	64.98	158.70	108.21
26	E11a_E12a	KnownJunction	0	94.85	73.82	126.95	140.20	67.48	101.81	98.27
27	ER12a	ExonRegion	0	120.98	86.53	165.82	127.28	59.09	136.64	103.61
28	E12a_E13a	KnownJunction	0	66.26	99.83	120.74	114.16	49.75	155.57	72.04
29	ER13a	ExonRegion	0	146.55	92.96	207.82	133.45	62.99	182.58	115.74
30	E13a_E14a	KnownJunction	1	105.85	41.67	196.67	94.03	61.69	164.55	81.35
31	E13a_E16a	NovelJunction	1	11.58	3.86	7.47	18.88	0.00	5.12	7.38
32	E13a_E18a	NovelJunction	1	1.90	0.00	0.69	4.39	0.00	9.70	0.00
33	ER14a	ExonRegion	0	93.63	43.04	157.20	81.49	54.72	130.88	74.40
34	E14a_E15a	KnownJunction	0	49.22	19.20	62.74	20.26	58.99	29.24	59.12
35	E14a_E16a	NovelJunction	0	48.78	62.37	88.64	105.60	11.43	149.97	36.66
36	E14a_E18a	NovelJunction	0	0.72	1.13	2.47	1.68	0.00	8.68	0.00
37	ER15a	ExonRegion	0	47.13	24.73	65.46	34.90	40.43	38.25	68.20
38	E15a_E16a	KnownJunction	0	42.56	22.80	60.63	25.68	32.83	38.32	50.27
39	ER16a	ExonRegion	0	96.68	57.13	143.89	91.16	51.39	108.92	86.13
40	E16a_E17a	KnownJunction	0	119.13	74.87	180.64	121.91	61.85	148.79	89.27
41	E16a_E18a	NovelJunction	0	11.17	15.84	15.16	29.69	12.84	45.13	27.53
42	ER17a	ExonRegion	0	101.74	51.52	150.93	98.00	50.09	113.45	78.65
43	E17a_E18a	KnownJunction	0	107.07	47.31	144.25	86.66	46.24	109.99	76.01
44	ER18a	ExonRegion	0	116.23	59.26	153.37	110.25	58.31	133.30	78.88
45	E18a_E19a	KnownJunction	0	121.10	60.14	153.46	143.61	61.80	157.15	78.65
46	ER19a	ExonRegion	0	164.28	70.26	176.19	155.11	76.17	176.64	102.69
47	E19a_E20a	KnownJunction	0	180.77	62.79	163.68	139.79	100.88	140.22	105.22
48	E19a_E21a	NovelJunction	0	1.59	9.14	8.45	14.52	0.00	7.42	0.57
49	ER20a	ExonRegion	0	188.32	71.28	183.69	136.70	82.81	186.96	124.84
50	E20a_E21a	KnownJunction	0	157.30	72.48	182.69	127.76	89.26	220.83	114.42
51	E21_Aa	NovelBoundary	1	80.55	2.81	92.67	1.30	3.16	10.64	8.64
52	ER21a	ExonRegion	0	72.99	47.30	100.83	83.34	39.59	115.33	76.13
53	IG47	Intergenic	0	17.49	13.56	13.86	20.72	2.45	25.61	18.84
54	IG47_AR1	ActiveIntergenicRegion	0	20.66	12.45	15.17	18.15	3.22	22.23	20.19
55	IG47_SR1	SilentIntergenicRegion	0	18.24	16.08	13.62	23.27	2.27	30.20	20.67
56	IG47_AR2	ActiveIntergenicRegion	0	13.57	11.32	12.96	19.85	1.97	22.81	15.19