Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MFF	Gene	0	152.39	92.28	157.91	73.37	276.11	130.11	221.75
2	353339	Transcript	0	3.69	1.74	5.95	0.31	8.14	2.66	5.65
3	409565	Transcript	1	4.61	25.14	6.98	6.56	8.30	6.75	7.14
4	409616	Transcript	0	0	0	0	0	0	0	0
5	349901	Transcript	0	0	0	0	0	0	0	0
6	354503	Transcript	0	0	0	0	0	0	0	0
7	304593	Transcript	1	144.97	55.46	91.40	30.34	58.85	63.92	272.51
8	337110	Transcript	0	10.03	13.21	14.86	11.38	30.36	26.72	14.96
9	392059	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	392058	Transcript	0	0	0	0	0	0	0	0
11	ER1a	ExonRegion	0	2.12	1.85	5.35	0.00	3.59	1.23	3.76
12	ER1b	ExonRegion	0	4.87	4.86	9.93	0.00	5.13	4.90	8.99
13	ER1c	ExonRegion	0	8.20	10.53	11.52	0.00	7.83	8.38	17.99
14	ER1d	ExonRegion	0	25.44	36.61	26.65	16.93	53.88	34.34	46.22
15	E1a_E3a	KnownJunction	0	41.01	42.43	31.66	22.70	77.67	46.47	46.30
16	E1a_E5a	KnownJunction	1	4.61	25.14	6.98	6.56	8.30	6.75	7.14
17	E1a_E6a	NovelJunction	1	5.04	12.79	2.10	4.66	4.38	0.00	7.98
18	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	ER3a	ExonRegion	0	146.25	95.40	115.46	78.40	349.28	151.88	191.99
20	E3a_E4a	KnownJunction	1	31.19	20.57	26.43	23.79	31.35	42.80	19.78
21	E3a_E5a	KnownJunction	0	174.99	109.79	135.02	99.05	492.48	187.28	233.37
22	ER4a	ExonRegion	0	49.15	22.29	50.68	33.95	46.80	51.95	44.78
23	E4_Ab	KnownBoundary	1	67.76	24.88	64.75	51.20	55.93	63.06	54.53
24	ER4b	ExonRegion	1	46.02	19.80	54.15	40.85	74.94	65.94	44.58
25	E4a_E5a	KnownJunction	1	32.11	20.33	41.46	34.30	88.57	69.81	36.03
26	ER5a	ExonRegion	0	328.21	202.19	315.50	178.68	653.42	327.00	460.60
27	E5a_E6a	KnownJunction	0	238.30	178.78	243.68	128.85	477.79	228.25	372.26
28	ER6a	ExonRegion	0	299.56	230.71	367.81	167.01	706.86	313.47	565.62
29	E6a_E7a	KnownJunction	0	357.95	241.09	360.49	172.46	625.52	328.65	403.11
30	E6a_E11a	NovelJunction	0	3.49	9.90	2.23	4.58	4.31	4.34	2.35
31	ER7a	ExonRegion	0	322.89	233.88	328.15	181.27	556.29	292.72	522.86
32	E7a_E8a	KnownJunction	0	93.91	68.62	62.84	34.27	60.42	94.82	100.75
33	E7a_E9a	KnownJunction	1	144.97	55.46	91.40	30.34	58.85	63.92	272.51
34	E7a_E10a	KnownJunction	1	15.34	7.38	36.56	15.17	113.97	14.85	46.28
35	E7a_E11a	KnownJunction	1	51.82	68.70	122.13	90.43	356.05	99.91	145.03
36	ER8a	ExonRegion	0	103.56	58.78	68.05	35.03	80.09	76.96	83.74
37	E8a_E9a	KnownJunction	0	97.34	48.05	51.12	24.79	27.36	62.95	72.47
38	E8a_E11a	KnownJunction	0	10.03	13.21	14.86	11.38	30.36	26.72	14.96
39	ER9a	ExonRegion	0	183.12	91.11	95.89	52.55	63.36	115.51	230.64
40	E9a_E10a	KnownJunction	0	97.59	65.78	55.76	34.97	52.17	117.36	136.35
41	E9a_E11a	NovelJunction	1	19.39	18.10	8.33	1.30	6.45	4.61	16.08
42	ER10a	ExonRegion	0	77.25	70.32	65.39	42.92	134.04	116.43	164.54
43	E10a_E11a	KnownJunction	0	105.23	73.69	82.40	38.74	154.38	108.24	228.40
44	ER11a	ExonRegion	0	215.10	165.54	235.33	131.80	561.04	217.77	407.05
45	E11a_E12a	KnownJunction	0	196.69	179.33	208.04	96.31	469.33	183.10	330.07
46	ER12a	ExonRegion	0	217.43	118.02	238.35	94.26	409.57	140.54	291.07
47	E12_Da	KnownBoundary	0	261.93	85.86	270.08	76.07	394.02	105.62	225.42
48	ER12b	ExonRegion	0	88.43	32.10	115.46	29.50	146.44	44.64	107.80
49	E12_Db	KnownBoundary	0	40.26	10.53	46.52	14.58	84.03	25.81	40.64
50	ER12c	ExonRegion	0	23.74	7.72	25.04	3.83	50.07	13.84	24.62
51	ER12d	ExonRegion	0	5.25	1.62	6.55	0.62	12.69	4.09	7.53