Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	EIF4E2	Gene	0	75.82	82.24	81.06	47.19	196.23	63.05	97.36
2	258416	Transcript	1	6.83	22.60	7.95	9.97	32.23	11.43	26.19
3	409514	Transcript	0	19.34	9.48	24.80	6.65	25.71	10.86	18.56
4	409098	Transcript	0	1.54	2.43	0.68	0.00	8.50	3.68	6.07
5	409495	Transcript	0	0	0	0	0	0	0	0
6	409167	Transcript	0	17.22	12.87	16.14	8.27	13.37	3.50	25.74
7	373575	Transcript	0	0	0	0	0	0	0	0
8	409322	Transcript	0	0	0	0	0	0	0	0
9	409394	Transcript	0	0	0	0	0	0	0	0
10	ER1a	ExonRegion	0	2.85	8.67	1.50	1.89	18.85	6.36	13.36
11	E1_Ab	KnownBoundary	0	3.42	0.00	1.49	1.54	2.19	7.77	4.37
12	E1_Ac	KnownBoundary	0	3.04	0.00	0.89	0.00	0.00	0.00	0.89
13	E1_Ad	KnownBoundary	0	2.99	0.00	0.83	0.00	2.35	0.00	6.65
14	E1_Ae	KnownBoundary	1	41.02	69.96	28.09	31.94	60.81	45.69	129.40
15	ER1b	ExonRegion	1	13.06	48.19	5.98	17.46	49.81	29.02	66.67
16	ER1c	ExonRegion	1	14.60	59.12	8.81	24.94	59.12	40.05	93.77
17	ER1d	ExonRegion	1	17.67	68.44	13.43	27.33	71.33	45.77	110.07
18	ER1e	ExonRegion	0	130.69	296.97	152.48	156.93	670.03	157.23	345.41
19	E1a_E2a	KnownJunction	0	243.89	473.75	286.44	265.55	1470.43	266.20	545.80
20	ER2a	ExonRegion	0	134.80	351.67	141.08	163.85	332.99	180.19	282.98
21	E2a_E3a	KnownJunction	0	173.04	369.22	142.96	172.27	149.34	185.86	344.20
22	E2a_E4a	KnownJunction	1	18.21	47.47	23.09	38.93	9.61	33.66	11.82
23	ER3a	ExonRegion	0	277.05	327.17	287.99	151.49	771.90	202.83	429.97
24	E3a_E4a	KnownJunction	0	187.38	319.17	167.52	143.96	685.80	147.32	277.74
25	ER4a	ExonRegion	0	203.00	357.25	226.28	171.26	460.40	220.26	314.91
26	E4a_E5a	KnownJunction	0	194.97	367.06	218.14	195.19	592.90	242.14	288.02
27	ER5a	ExonRegion	0	296.90	355.37	263.85	177.83	571.73	237.47	361.73
28	E5a_E6a	KnownJunction	0	255.89	300.49	212.18	168.89	429.08	235.28	283.39
29	ER6a	ExonRegion	0	306.01	355.56	257.94	193.34	487.21	246.57	350.82
30	E6_Da	KnownBoundary	1	3.66	26.95	8.54	9.32	1.84	0.99	15.84
31	E6a_E7a	KnownJunction	0	216.89	239.25	127.64	122.91	233.82	158.31	177.39
32	E6a_E8a	KnownJunction	0	12.45	8.41	18.26	6.85	21.60	11.55	16.17
33	E6a_E9a	KnownJunction	0	62.29	37.73	46.98	37.79	167.06	36.55	43.84
34	ER6b	ExonRegion	1	9.35	19.69	11.23	7.95	7.86	3.69	25.50
35	E6_Db	KnownBoundary	1	20.63	17.68	23.35	15.44	13.21	1.66	32.99
36	ER6c	ExonRegion	0	17.22	12.87	16.14	8.27	13.37	3.50	25.74
37	E6_Dc	NovelBoundary	1	15.91	14.74	9.07	6.66	11.25	4.93	33.56
38	I6	Intron	1	21.44	24.33	14.46	9.16	16.44	8.58	31.11
39	I6_AR1	ActiveIntronRegion	1	21.47	24.35	14.48	9.17	16.46	8.59	31.14
40	ER7a	ExonRegion	0	89.04	129.64	71.18	71.42	122.23	85.45	119.59
41	E7_Da	NovelBoundary	1	24.60	62.74	34.68	34.62	95.02	37.44	78.09
42	ER7b	ExonRegion	1	10.81	36.52	14.40	18.06	45.61	16.49	39.02
43	ER8a	ExonRegion	0	16.22	9.33	21.21	7.01	28.80	10.66	17.87
44	E8a_E9a	KnownJunction	0	29.36	10.69	34.93	6.10	26.74	10.37	21.64
45	ER9a	ExonRegion	0	103.66	50.17	90.41	48.85	221.49	53.70	69.15
46	E9_Da	KnownBoundary	0	73.24	27.40	58.42	40.18	172.00	34.17	44.89
47	E9_Db	KnownBoundary	0	53.99	28.01	54.08	16.36	110.52	39.96	46.33
48	ER9b	ExonRegion	0	105.63	46.54	98.79	47.10	200.53	60.07	78.46
49	ER9c	ExonRegion	0	53.88	35.40	66.84	27.52	179.67	43.30	56.86
50	ER9d	ExonRegion	0	1.54	2.43	0.68	0.00	8.50	3.68	6.07
51	IG26_AR1	ActiveIntergenicRegion	0	11.43	4.62	9.83	2.53	23.46	2.63	4.42
52	IG26_SR1	SilentIntergenicRegion	0	6.87	3.49	7.56	2.69	26.57	2.86	4.13