Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PIP5K3	Gene	0	80.78	25.07	94.18	39.90	85.70	57.50	42.75
2	392202	Transcript	0	8.43	5.98	11.83	10.82	7.69	4.63	3.48
3	264380	Transcript	1	16.79	10.14	37.41	17.39	40.80	10.93	17.17
4	392200	Transcript	0	13.85	11.77	18.08	11.03	10.10	17.13	16.32
5	308862	Transcript	0	2.19	2.94	2.93	3.29	0.00	7.08	5.66
6	407449	Transcript	0	0	0	0	0	0	0	0
7	ER1a	ExonRegion	0	1.47	1.21	1.75	2.18	1.28	5.41	1.41
8	ER1b	ExonRegion	0	5.79	4.47	7.22	14.30	4.25	19.85	2.60
9	E1a_E2a	KnownJunction	0	7.79	11.17	9.51	20.64	16.23	9.22	6.89
10	ER2a	ExonRegion	0	25.81	26.17	41.06	40.98	21.86	69.81	21.01
11	E2a_E3a	KnownJunction	0	29.51	32.37	46.06	41.53	17.57	65.87	27.39
12	ER3a	ExonRegion	0	35.42	30.91	44.28	43.36	34.89	74.81	29.01
13	E3a_E4a	KnownJunction	0	3.40	3.99	3.81	5.93	0.00	15.41	10.69
14	E3a_E5a	KnownJunction	0	23.53	18.76	27.82	26.55	17.40	37.44	13.70
15	E3a_E7a	KnownJunction	0	9.75	7.22	9.74	16.07	7.79	5.76	3.20
16	ER4a	ExonRegion	0	2.33	3.39	3.35	3.93	0.00	4.16	5.40
17	E4a_E5a	NovelJunction	1	3.09	0.00	5.73	3.14	1.01	9.76	19.65
18	E4a_E7a	KnownJunction	0	0.85	1.44	1.62	0.00	0.00	1.66	0.89
19	ER5a	ExonRegion	0	25.39	16.46	37.40	29.76	31.50	41.42	23.40
20	E5a_E6a	KnownJunction	0	30.13	12.08	28.96	19.37	27.89	40.41	24.18
21	E5a_E7a	NovelJunction	1	4.94	1.23	4.35	10.78	1.01	11.82	3.01
22	ER6a	ExonRegion	0	26.23	13.39	43.62	23.54	37.54	25.95	32.76
23	E6a_E7a	KnownJunction	0	27.57	16.68	40.06	14.68	26.05	27.47	21.25
24	ER7a	ExonRegion	0	41.29	30.24	63.01	49.17	52.20	43.27	36.42
25	E7a_E8a	KnownJunction	0	46.90	31.42	63.62	53.29	47.00	30.02	38.06
26	ER8a	ExonRegion	0	44.01	34.95	64.38	70.55	46.28	46.63	42.07
27	E8a_E9a	KnownJunction	0	34.46	29.14	64.29	42.21	51.91	35.88	39.71
28	ER9a	ExonRegion	0	57.39	31.97	82.93	53.55	62.52	49.81	43.19
29	E9a_E10a	KnownJunction	0	69.41	29.27	88.25	54.32	74.58	47.49	48.34
30	ER10a	ExonRegion	0	77.95	31.86	101.46	63.12	66.46	68.14	55.70
31	E10a_E11a	KnownJunction	0	65.89	30.03	88.13	61.63	79.83	50.28	51.08
32	ER11a	ExonRegion	0	57.72	22.79	89.58	48.98	76.61	61.20	55.15
33	E11a_E12a	KnownJunction	0	39.57	24.80	63.93	26.33	83.68	43.74	40.06
34	ER12a	ExonRegion	0	45.87	26.93	83.01	39.96	66.73	47.86	51.29
35	E12a_E13a	KnownJunction	0	19.58	16.10	41.76	30.88	46.59	21.36	21.97
36	E12a_E14a	KnownJunction	0	13.85	11.77	18.08	11.03	10.10	17.13	16.32
37	I12	Intron	1	11.88	5.59	26.31	2.88	7.49	3.35	6.61
38	I12_AR1	ActiveIntronRegion	1	12.23	5.63	26.95	3.06	7.72	3.28	6.68
39	I12_SR1	SilentIntronRegion	1	10.19	5.51	23.20	1.91	6.30	3.77	6.33
40	ER13a	ExonRegion	0	33.15	20.39	57.99	27.87	56.21	24.95	34.60
41	E13_Da	KnownBoundary	0	9.13	8.51	7.53	2.90	9.91	5.68	9.04
42	E13a_E14a	KnownJunction	0	16.79	10.14	37.41	17.39	40.80	10.93	17.17
43	ER13b	ExonRegion	0	7.87	6.49	9.90	8.50	8.54	6.48	6.00
44	E13_Db	KnownBoundary	0	11.00	4.02	15.86	5.66	10.00	4.29	7.58
45	ER13c	ExonRegion	0	7.11	4.74	13.92	5.58	7.59	3.50	3.77
46	ER14a	ExonRegion	0	43.93	31.16	70.91	33.11	53.07	39.07	42.33
47	E14a_E15a	KnownJunction	0	49.47	34.81	67.83	30.34	46.68	51.64	43.98
48	ER15a	ExonRegion	0	53.81	34.58	71.89	38.75	58.80	47.72	38.11
49	E15a_E16a	KnownJunction	0	70.25	34.44	76.48	33.08	71.14	38.43	43.42
50	ER16a	ExonRegion	0	61.16	25.61	73.95	29.88	57.62	35.87	38.93
51	E16a_E17a	KnownJunction	0	82.60	22.36	80.95	22.08	67.57	35.64	36.09
52	ER17a	ExonRegion	0	118.19	22.40	120.83	33.90	107.49	57.46	45.50
53	E17a_E18a	KnownJunction	0	143.43	21.57	137.73	36.14	80.78	63.62	43.34
54	ER18a	ExonRegion	0	158.07	17.18	138.58	49.45	103.35	68.74	46.95
55	E18a_E19a	KnownJunction	0	150.38	14.16	129.59	42.07	125.80	52.05	53.80
56	ER19a	ExonRegion	0	103.99	30.67	113.22	47.28	77.62	37.35	47.35
57	E19a_E20a	KnownJunction	0	80.08	34.60	92.90	48.38	52.10	35.03	43.41
58	ER20a	ExonRegion	0	81.12	39.64	113.91	45.63	81.65	35.80	51.95
59	E20a_E21a	KnownJunction	0	80.96	33.55	100.00	46.24	42.51	43.82	52.25
60	ER21a	ExonRegion	0	75.60	34.36	94.93	43.04	64.74	48.40	44.53
61	E21a_E22a	KnownJunction	0	167.22	42.45	166.55	61.58	136.29	67.75	72.17
62	ER22a	ExonRegion	0	152.78	35.04	140.32	63.64	128.41	59.70	68.40
63	E22a_E23a	KnownJunction	0	106.58	22.41	110.54	52.80	109.78	53.33	52.22
64	E22a_E24a	NovelJunction	0	4.27	11.11	2.67	6.39	0.00	5.47	2.72
65	ER23a	ExonRegion	0	127.64	29.98	173.36	52.94	139.64	51.02	69.48
66	E23a_E24a	KnownJunction	0	125.14	24.51	195.13	52.56	172.30	44.86	73.53
67	E24_Aa	NovelBoundary	0	4.64	8.83	3.64	4.58	5.23	4.15	4.94
68	ER24a	ExonRegion	0	129.74	29.47	150.22	50.44	153.21	63.30	66.41
69	E24_Da	NovelBoundary	1	58.51	0.00	54.84	1.38	1.87	1.07	1.48
70	E24a_E25a	KnownJunction	0	139.46	24.22	152.22	46.84	225.23	76.92	75.58
71	ER25a	ExonRegion	0	142.33	29.47	159.79	48.21	126.41	70.51	87.70
72	E25a_E26a	KnownJunction	0	148.16	22.70	180.82	60.74	136.98	73.14	108.29
73	E26_Aa	NovelBoundary	1	76.92	1.63	98.48	2.76	3.67	3.32	2.77
74	ER26a	ExonRegion	0	99.38	29.69	135.44	48.75	137.80	69.37	70.83
75	E26a_E27a	KnownJunction	0	78.84	24.20	104.63	45.92	73.28	53.73	53.56
76	ER27a	ExonRegion	0	69.69	21.88	102.76	54.33	70.65	63.88	50.82
77	E27a_E28a	KnownJunction	0	80.20	25.80	119.78	43.16	68.81	40.79	37.19
78	ER28a	ExonRegion	0	97.48	28.99	133.34	59.51	104.21	78.15	56.77
79	E28a_E29a	KnownJunction	0	144.53	28.53	168.97	79.43	91.29	86.97	50.03
80	E29_Aa	NovelBoundary	1	65.42	0.00	73.07	0.00	0.00	0.00	0.54
81	ER29a	ExonRegion	0	110.92	44.86	145.04	76.48	106.90	84.11	60.51
82	E29a_E30a	KnownJunction	0	67.04	46.05	91.77	56.05	140.90	76.38	60.92
83	ER30a	ExonRegion	0	89.62	34.63	92.55	58.95	106.61	81.44	52.76
84	E30a_E31a	KnownJunction	0	100.51	19.94	87.99	59.52	94.12	69.46	37.65
85	ER31a	ExonRegion	0	95.79	28.87	97.81	53.70	94.38	67.80	41.73
86	E31a_E32a	KnownJunction	0	150.09	27.45	107.55	66.45	122.18	83.13	47.78
87	ER32a	ExonRegion	0	147.62	36.17	133.52	77.02	116.97	77.98	55.65
88	E32a_E33a	KnownJunction	0	130.13	30.45	118.79	75.42	119.41	85.65	53.63
89	ER33a	ExonRegion	0	136.00	28.60	125.29	57.24	127.79	84.50	60.56
90	E33a_E34a	KnownJunction	0	106.45	25.17	108.05	58.00	111.30	87.10	38.15
91	ER34a	ExonRegion	0	99.18	29.88	108.15	53.03	107.22	97.20	47.19
92	E34a_E35a	KnownJunction	0	92.18	33.39	96.99	43.16	125.34	105.75	48.70
93	ER35a	ExonRegion	0	98.17	33.95	102.80	49.10	122.63	110.99	57.32
94	E35a_E36a	KnownJunction	0	79.49	31.45	92.30	44.10	102.65	66.65	35.13
95	ER36a	ExonRegion	0	97.53	32.20	85.69	40.33	114.09	52.61	44.49
96	E36a_E37a	KnownJunction	0	124.59	25.46	97.68	48.01	124.30	66.25	41.35
97	ER37a	ExonRegion	0	152.18	35.78	108.67	53.10	138.77	74.62	48.55
98	E37a_E38a	KnownJunction	0	177.40	41.27	122.13	58.46	166.56	72.81	54.86
99	ER38a	ExonRegion	0	140.45	33.28	105.54	45.61	110.48	62.41	47.71
100	E38a_E39a	KnownJunction	0	97.55	27.95	85.53	29.85	92.07	43.34	32.78
101	ER39a	ExonRegion	0	68.44	18.49	80.61	27.97	76.80	46.32	39.09
102	E39a_E40a	KnownJunction	0	47.00	16.26	72.80	29.01	59.80	37.41	29.80
103	ER40a	ExonRegion	0	63.71	23.05	96.59	39.55	78.02	66.62	32.78
104	E40a_E41a	KnownJunction	0	66.23	27.27	96.74	37.39	84.40	73.51	37.03
105	ER41a	ExonRegion	0	102.29	29.78	115.69	48.68	120.83	77.72	49.57
106	E41a_E42a	KnownJunction	0	166.67	33.31	149.52	54.59	222.71	93.34	56.21
107	ER42a	ExonRegion	0	177.70	29.22	169.91	55.15	207.02	102.17	62.05
108	E42a_E43a	KnownJunction	0	177.06	39.70	160.16	51.61	182.42	119.31	56.61
109	ER43a	ExonRegion	0	90.55	21.04	103.94	35.02	104.88	66.60	42.58