Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MAP2	Gene	0	30.23	52.20	75.15	118.89	21.39	10.04	107.01
2	199940	Transcript	0	23.15	69.00	54.58	118.40	7.08	15.14	66.21
3	392193	Transcript	0	0.00	0.00	0.20	0.00	0.17	0.00	0.00
4	361559	Transcript	0	0	0	0	0	0	0	0
5	360351	Transcript	0	6.53	13.89	16.13	28.51	5.41	4.22	30.52
6	392195	Transcript	0	0	0	0	0	0	0	0
7	392194	Transcript	0	0.48	1.21	3.13	3.74	0.20	0.00	1.35
8	IG2_AR3	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	26.20	0.00	0.00
9	ER1a	ExonRegion	0	10.11	34.42	17.58	58.46	3.42	6.17	27.71
10	E1a_E2a	KnownJunction	0	35.05	57.59	65.23	106.14	2.12	15.92	70.61
11	E1a_E5a	NovelJunction	0	0.00	6.75	3.85	11.11	2.07	1.39	6.76
12	ER2a	ExonRegion	0	28.40	89.00	71.06	141.48	9.23	19.27	85.11
13	E2a_E5a	KnownJunction	0	19.03	95.00	64.44	167.53	13.53	19.19	81.40
14	ER3a	ExonRegion	0	0.00	0.01	0.41	0.00	0.33	0.00	0.00
15	E3a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	ER4a	ExonRegion	0	0.00	0.03	0.02	0.03	0.01	0.05	0.01
17	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER5a	ExonRegion	0	24.97	105.29	72.03	159.40	14.98	27.18	91.97
19	ER5b	ExonRegion	0	36.38	117.76	87.21	207.90	12.02	34.20	119.61
20	E5a_E6a	KnownJunction	0	55.13	124.82	116.28	237.35	13.58	37.22	140.55
21	ER6a	ExonRegion	0	53.07	141.62	133.11	288.65	21.09	41.49	168.88
22	E6a_E7a	KnownJunction	0	42.91	147.59	125.70	307.57	16.09	30.98	177.97
23	ER7a	ExonRegion	0	35.59	163.18	110.49	320.05	28.02	30.79	226.93
24	E7a_E8a	KnownJunction	1	28.81	171.76	95.15	346.68	41.56	39.10	262.68
25	ER8a	ExonRegion	1	27.49	196.30	95.74	360.15	39.60	34.24	279.48
26	E8_Da	KnownBoundary	1	27.05	206.78	102.86	359.34	44.10	21.71	250.77
27	ER8b	ExonRegion	1	36.49	198.11	129.39	420.40	44.00	26.18	278.61
28	E8b_E9a	KnownJunction	0	45.45	202.16	134.08	438.93	46.71	30.85	304.47
29	ER9a	ExonRegion	0	39.93	209.59	111.37	396.21	39.88	33.35	261.91
30	E9a_E10a	KnownJunction	1	2.95	6.65	8.51	29.96	3.20	4.23	25.50
31	E9a_E13a	KnownJunction	0	27.34	175.86	88.10	282.32	40.99	30.47	187.11
32	ER10a	ExonRegion	0	10.23	16.80	22.54	40.99	8.56	2.83	41.08
33	E10a_E11a	KnownJunction	1	5.81	16.16	10.99	13.63	4.26	1.31	19.16
34	ER11a	ExonRegion	1	6.60	14.24	21.02	30.75	5.41	5.38	33.31
35	E11a_E12a	KnownJunction	1	6.74	16.58	16.94	36.98	5.49	7.08	36.29
36	ER12a	ExonRegion	1	8.12	16.16	21.54	30.75	6.65	5.55	35.24
37	E12a_E13a	KnownJunction	1	5.29	10.67	11.34	16.53	4.33	3.16	23.06
38	ER13a	ExonRegion	0	40.02	178.33	127.93	317.19	53.91	29.90	225.47
39	E13a_E14a	KnownJunction	1	29.98	94.47	90.09	177.23	13.00	20.85	35.58
40	E13a_E15a	KnownJunction	1	21.05	88.04	60.53	176.39	42.33	12.68	218.18
41	ER14a	ExonRegion	1	50.60	108.96	120.18	254.67	14.95	20.76	56.77
42	E14a_E15a	KnownJunction	1	48.97	85.36	101.91	249.81	13.30	16.99	60.12
43	ER15a	ExonRegion	0	61.37	202.45	130.80	381.45	41.18	38.63	281.49
44	E15a_E16a	KnownJunction	0	32.48	182.61	103.01	331.95	35.94	37.41	227.53
45	ER16a	ExonRegion	0	33.63	141.92	89.80	248.21	37.24	24.71	205.43
46	E16_Da	NovelBoundary	0	6.59	28.64	12.23	12.27	3.27	9.38	3.91
47	E16a_E17a	KnownJunction	0	24.40	50.31	71.26	88.75	34.10	4.07	120.01
48	E16a_E18a	KnownJunction	0	6.79	49.78	13.80	109.10	2.21	13.05	18.29
49	I16_AR1	ActiveIntronRegion	0	4.05	13.51	8.42	12.70	2.29	4.75	4.14
50	ER17a	ExonRegion	0	38.15	43.94	95.25	96.15	29.60	9.45	143.96
51	E17a_E18a	KnownJunction	1	37.12	50.44	90.58	77.78	26.16	14.26	133.51
52	ER18a	ExonRegion	0	37.64	100.09	109.45	224.54	37.35	22.85	189.09
53	E18a_E19a	KnownJunction	0	40.62	111.39	118.24	286.38	19.69	19.54	212.95
54	ER19a	ExonRegion	0	48.33	118.93	117.07	272.31	36.29	22.59	229.09
55	E19a_E20a	KnownJunction	0	40.96	104.46	101.35	295.51	35.41	18.06	203.68
56	ER20a	ExonRegion	0	49.45	53.34	122.84	140.76	32.63	10.59	147.27
57	ER20b	ExonRegion	0	0.48	1.21	3.13	3.74	0.20	0.00	1.35