Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	NIF3L1	Gene	0	40.24	20.63	50.20	18.64	255.23	10.64	54.17
2	374679	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	358515	Transcript	0	0	0	0	0	0	0	0
4	403702	Transcript	0	0	0	0	0	0	0	0
5	409020	Transcript	0	3.28	1.21	4.08	1.70	49.38	0.71	2.34
6	409357	Transcript	0	1.37	0.00	0.00	0.00	9.05	0.00	1.53
7	359683	Transcript	0	3.49	4.44	3.54	0.00	106.32	0.00	8.50
8	409129	Transcript	0	0.00	0.00	0.00	0.00	4.13	0.00	0.00
9	409588	Transcript	0	32.27	8.50	23.03	8.11	209.35	4.29	23.61
10	ER1a	ExonRegion	0	6.15	3.30	5.66	3.03	19.03	0.96	6.36
11	ER1b	ExonRegion	0	16.78	12.55	11.63	8.73	101.64	3.06	17.09
12	E1_Ad	KnownBoundary	0	0.97	1.63	6.97	0.00	74.51	0.00	4.93
13	ER1c	ExonRegion	0	1.28	2.43	5.19	0.36	34.28	0.00	4.02
14	E1_Ae	KnownBoundary	0	13.19	3.84	10.66	2.87	67.43	1.15	12.31
15	ER1d	ExonRegion	0	4.03	2.43	9.14	1.25	67.52	0.00	7.67
16	ER1e	ExonRegion	0	8.48	5.26	12.79	1.97	84.83	0.66	11.16
17	ER1f	ExonRegion	0	11.04	4.43	15.53	4.39	84.03	5.75	19.49
18	E1b_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	E1b_E3a	NovelJunction	0	4.64	0.00	4.33	0.00	33.84	3.48	4.10
20	E1c_E2a	KnownJunction	0	1.02	0.00	0.00	0.00	3.27	0.00	0.76
21	E1c_E3b	KnownJunction	0	5.27	0.00	2.96	3.03	64.48	1.42	0.66
22	E1c_E3c	KnownJunction	0	3.49	4.44	3.54	0.00	106.32	0.00	8.50
23	ER1g	ExonRegion	0	20.75	3.64	16.26	4.99	281.83	4.90	16.86
24	I1_SR1	SilentIntronRegion	0	13.10	1.25	16.79	0.23	38.63	0.66	8.02
25	E2_Aa	NovelBoundary	0	32.48	1.37	32.30	7.29	46.17	2.41	19.78
26	ER2a	ExonRegion	0	1.22	0.04	0.59	0.08	34.40	0.00	2.01
27	E2_Da	NovelBoundary	1	12.52	1.63	25.16	1.68	56.83	2.33	9.50
28	E2a_E3b	KnownJunction	0	1.72	0.00	0.00	0.00	14.82	0.00	2.29
29	E2a_E3c	KnownJunction	0	0.00	0.00	0.00	0.00	8.25	0.00	0.00
30	I2_AR1	ActiveIntronRegion	0	9.39	2.53	13.82	3.89	28.25	1.27	9.54
31	E3_Aa	NovelBoundary	0	10.35	4.99	13.95	2.95	32.11	0.00	9.26
32	E3_Ab	NovelBoundary	0	25.14	1.34	17.04	1.68	43.50	0.00	10.22
33	ER3a	ExonRegion	0	32.27	8.50	23.03	8.11	209.35	4.29	23.61
34	ER3b	ExonRegion	0	58.54	18.51	47.79	16.50	467.44	10.67	46.19
35	E3_Ac	KnownBoundary	0	60.32	24.35	56.33	16.07	319.24	17.18	54.65
36	ER3c	ExonRegion	0	56.09	25.53	58.66	25.44	337.08	11.67	73.84
37	E3a_E4a	KnownJunction	0	54.14	28.69	61.88	21.92	360.75	14.26	70.09
38	ER4a	ExonRegion	0	66.39	32.11	82.52	27.04	390.70	17.06	77.41
39	E4_Da	NovelBoundary	0	49.49	32.10	78.75	28.53	398.21	14.58	74.45
40	E4b_E5a	KnownJunction	0	59.97	33.71	78.78	25.76	287.77	12.06	68.56
41	ER4b	ExonRegion	0	54.51	35.11	80.97	27.93	332.52	14.26	74.65
42	E5_Aa	NovelBoundary	1	14.70	0.00	24.34	0.00	1.18	1.37	3.35
43	ER5a	ExonRegion	0	63.31	32.25	85.89	24.23	325.97	15.74	67.52
44	E5_Da	NovelBoundary	0	34.61	24.09	53.76	17.04	275.64	12.30	50.36
45	E5a_E8b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	E5b_E6a	KnownJunction	0	40.52	18.34	72.07	24.71	403.52	13.02	68.35
47	E5b_E7a	KnownJunction	0	1.97	0.00	2.93	0.00	17.34	0.00	0.54
48	ER5b	ExonRegion	0	41.41	24.07	67.81	22.54	363.26	11.81	62.59
49	ER6a	ExonRegion	0	52.81	27.81	72.11	17.49	361.58	13.19	72.11
50	E6a_E7a	KnownJunction	0	33.45	30.66	56.88	16.69	235.23	10.61	63.88
51	ER7a	ExonRegion	0	35.20	27.81	61.71	19.31	306.17	12.96	64.60
52	E7a_E8a	KnownJunction	0	41.09	36.49	56.92	17.93	341.55	17.21	57.97
53	ER8a	ExonRegion	0	44.69	27.45	59.92	25.21	284.08	10.04	67.71
54	E8_Ab	KnownBoundary	0	36.53	25.90	49.07	27.66	258.98	16.00	55.41
55	ER8b	ExonRegion	0	31.94	20.80	46.57	26.27	205.19	13.47	53.53
56	E8_Da	KnownBoundary	0	28.89	13.56	37.45	17.93	144.61	7.61	38.31
57	ER8c	ExonRegion	0	19.94	10.45	27.19	15.50	88.44	11.36	32.14
58	E8_Db	KnownBoundary	0	14.05	5.99	23.97	10.67	100.76	10.43	21.86
59	ER8d	ExonRegion	0	4.72	3.10	12.92	4.48	58.82	6.13	10.07
60	ER8e	ExonRegion	0	3.84	1.21	8.13	2.49	31.58	2.45	4.38
61	ER8f	ExonRegion	0	1.08	1.21	2.57	0.50	10.53	0.98	2.29