Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	LOC26010	Gene	0	102.94	115.41	74.71	95.56	234.46	96.70	128.55
2	409718	Transcript	0	0.00	0.74	0.00	0.93	11.39	0.00	2.36
3	409755	Transcript	0	0.00	1.29	0.00	1.68	2.07	0.00	0.77
4	409385	Transcript	0	0.00	0.00	0.00	0.00	0.00	4.58	0.00
5	409988	Transcript	0	7.90	10.58	4.05	2.99	17.76	4.42	5.14
6	409397	Transcript	0	0	0	0	0	0	0	0
7	409140	Transcript	0	27.75	62.93	17.47	27.15	82.46	36.09	33.46
8	409151	Transcript	0	0.29	0.01	0.01	1.40	2.01	0.00	0.74
9	360760	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	358677	Transcript	0	0.62	0.00	0.29	0.46	16.90	0.00	0.84
11	IG47_SR1	SilentIntergenicRegion	0	7.41	3.61	11.05	3.78	1.41	3.25	4.46
12	ER1a	ExonRegion	0	0.00	0.74	0.00	0.93	11.39	0.00	2.36
13	E1_Ab	KnownBoundary	0	0.00	1.34	0.00	1.03	0.00	0.00	1.39
14	ER1b	ExonRegion	0	0.33	3.38	0.05	1.17	13.10	0.01	1.56
15	E1_Ac	KnownBoundary	0	0.00	1.31	0.00	0.00	4.03	0.00	0.00
16	E1_Da	KnownBoundary	0	0.00	1.08	0.65	0.00	10.49	0.00	0.00
17	E1a_E3a	KnownJunction	0	0.00	1.29	0.00	1.68	2.07	0.00	0.77
18	ER1c	ExonRegion	0	2.31	4.86	1.35	2.49	26.73	1.23	3.37
19	ER1d	ExonRegion	0	1.43	1.88	0.41	0.92	44.61	0.00	1.23
20	E1b_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	16.87	0.00	0.00
21	ER1e	ExonRegion	0	1.51	0.00	0.20	1.83	26.78	0.00	0.74
22	ER1f	ExonRegion	0	7.90	10.58	4.05	2.99	17.76	4.42	5.14
23	E1_Ae	KnownBoundary	0	14.62	21.12	11.97	14.20	23.54	8.92	9.70
24	ER1g	ExonRegion	0	37.04	38.51	19.05	43.32	73.17	22.04	25.37
25	E1c_E3a	KnownJunction	0	69.01	58.80	31.40	82.11	219.81	48.21	52.07
26	ER2a	ExonRegion	0	7.68	19.36	4.72	11.26	12.39	11.91	8.61
27	E2a_E3a	KnownJunction	0	47.82	106.50	30.22	43.05	152.54	60.27	58.31
28	ER3a	ExonRegion	0	121.64	209.71	88.29	137.91	292.02	148.08	165.59
29	E3a_E5a	KnownJunction	0	93.21	198.56	90.36	127.65	201.74	148.85	177.70
30	E3a_E7c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	4.58	0.00
31	ER4a	ExonRegion	0	0.57	0.01	0.02	2.80	4.02	0.00	1.49
32	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	ER5a	ExonRegion	0	132.35	331.44	124.29	209.63	302.86	235.89	253.44
34	E5a_E7c	KnownJunction	0	161.69	412.67	145.26	269.80	412.00	311.60	276.97
35	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
36	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	ER7b	ExonRegion	0	82.22	225.96	76.88	144.65	219.87	168.57	151.78
38	ER7c	ExonRegion	0	269.96	479.56	227.92	342.67	650.84	347.56	383.67
39	E7a_E8a	KnownJunction	0	208.22	320.56	169.01	248.13	698.34	260.63	342.36
40	E7a_E9a	NovelJunction	1	1.72	4.05	5.86	12.92	0.00	29.24	0.53
41	E7b_E8b	KnownJunction	0	1.87	0.00	0.86	1.38	48.48	0.00	2.52
42	ER7d	ExonRegion	0	0.00	0.00	0.00	0.00	2.23	0.00	0.00
43	ER8a	ExonRegion	0	362.09	520.20	302.38	395.79	921.13	398.69	519.98
44	ER8b	ExonRegion	0	409.27	560.43	337.41	394.84	734.77	398.80	519.63
45	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	ER9a	ExonRegion	0	361.79	512.18	301.77	376.94	855.48	334.92	451.16
47	E9a_E10a	KnownJunction	1	73.59	188.68	72.08	105.03	279.63	100.02	290.28
48	E9a_E11a	KnownJunction	1	425.29	452.21	324.01	406.34	700.44	303.53	256.96
49	E10_Aa	NovelBoundary	1	29.07	0.00	25.65	0.00	5.51	0.00	2.38
50	ER10a	ExonRegion	1	105.52	192.27	88.01	109.87	373.04	103.08	317.01
51	E10a_E11a	KnownJunction	0	169.92	188.92	105.12	149.27	411.31	138.64	322.57
52	ER11a	ExonRegion	0	502.55	626.04	398.12	512.76	1257.36	426.57	605.72
53	E11a_E12a	KnownJunction	0	443.42	519.44	345.64	427.28	1284.04	389.45	573.11
54	E11a_E13a	NovelJunction	0	0.82	7.12	1.32	3.28	1.13	10.16	0.00
55	ER12a	ExonRegion	0	467.46	503.49	340.07	405.39	1049.86	345.36	562.90
56	E12a_E13a	KnownJunction	0	430.98	446.40	300.50	397.75	1001.55	310.53	504.06
57	ER13a	ExonRegion	0	381.33	439.71	304.03	392.86	1066.21	345.95	558.75
58	E13a_E14a	KnownJunction	0	371.99	436.39	293.87	374.34	1275.65	311.39	568.47
59	ER14a	ExonRegion	0	603.31	501.67	403.11	436.22	1283.65	378.55	670.32
60	E14a_E15a	KnownJunction	0	594.23	566.28	415.71	458.81	1031.08	467.92	751.37
61	E14a_E16a	NovelJunction	0	1.69	2.63	1.91	8.26	1.89	8.79	0.89
62	ER15a	ExonRegion	0	382.88	421.17	262.11	347.58	878.13	343.42	560.62
63	E15a_E16a	KnownJunction	0	134.99	249.47	107.32	209.39	339.15	202.02	332.12
64	ER16a	ExonRegion	0	339.04	270.28	183.82	252.26	676.17	268.16	295.56
65	E16_Da	KnownBoundary	0	343.58	252.49	241.19	253.17	775.59	251.25	358.57
66	ER16b	ExonRegion	0	110.76	134.97	109.40	152.54	322.20	161.83	188.15
67	E16_Db	KnownBoundary	0	2.65	0.00	5.17	1.00	2.90	6.08	9.42
68	E16_Dc	KnownBoundary	0	1.62	1.44	1.55	0.00	5.88	1.53	0.76
69	ER16c	ExonRegion	0	13.06	3.64	19.64	3.74	29.96	13.49	22.26
70	ER16d	ExonRegion	0	6.83	4.11	7.10	4.82	6.58	13.95	7.28