Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 ITGA4 Gene 0 0.02 0.00 0.33 0.20 7.22 5.97 11.98 2 397033 Transcript 0 0.01 0.00 0.14 0.01 2.28 1.59 3.44 3 339307 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 233573 Transcript 0 0.00 0.00 0.00 0.00 0.00 4.74 1.65 5 IG6_AR2 ActiveIntergenicRegion 0 4.01 0.00 9.14 1.05 3.40 0.00 2.31 6 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.09 0.16 7 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 1.66 4.34 8 ER1b ExonRegion 0 0.00 0.00 0.00 0.00 0.20 1.79 4.00 9 E1_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 2.55 5.63 10 ER1c ExonRegion 0 0.00 0.00 0.00 0.00 1.33 6.22 3.10 11 E1_Da KnownBoundary 0 0.00 0.00 0.00 0.00 1.91 1.23 0.86 12 E1a_E1d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 4.74 1.65 13 E1_Ad KnownBoundary 0 0.00 0.00 0.00 0.00 0.90 7.72 3.10 14 ER1d ExonRegion 0 0.00 0.00 0.00 0.00 1.75 8.58 2.70 15 ER1e ExonRegion 0 0.00 0.00 0.00 0.00 1.91 8.12 3.56 16 E1b_E2a KnownJunction 0 0.00 0.00 0.00 0.00 5.21 16.13 2.64 17 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 5.59 11.71 9.86 18 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 7.63 7.24 11.92 19 ER3a ExonRegion 0 0.00 0.00 0.00 0.89 6.18 13.12 9.73 20 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 4.33 4.05 10.43 21 ER4a ExonRegion 0 0.00 0.00 0.40 0.00 5.59 7.59 13.68 22 E4a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 1.18 1.66 4.86 23 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 ER6a ExonRegion 0 0.00 0.00 0.33 0.00 2.72 4.13 9.92 25 E6a_E7a KnownJunction 0 0.00 0.00 0.89 0.00 3.23 6.03 11.58 26 ER7a ExonRegion 0 0.00 0.00 0.22 0.00 5.56 4.66 11.49 27 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 3.27 3.24 8.68 28 ER8a ExonRegion 0 0.00 0.00 0.00 0.00 7.88 7.36 18.59 29 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 14.89 10.91 7.28 30 ER9a ExonRegion 0 0.00 0.00 1.33 0.00 15.32 7.53 12.25 31 E9a_E10a KnownJunction 0 0.00 0.00 1.29 0.00 20.86 6.65 15.81 32 ER10a ExonRegion 0 0.00 0.00 0.74 0.00 10.16 5.45 19.43 33 E10a_E11a KnownJunction 0 0.00 0.00 1.78 0.00 12.91 0.00 19.46 34 ER11a ExonRegion 0 0.00 0.00 0.56 0.00 18.11 12.07 18.38 35 E11a_E12a KnownJunction 0 0.00 0.00 0.62 0.00 15.54 16.48 18.86 36 ER12a ExonRegion 0 0.00 0.00 0.28 0.00 10.91 10.29 21.14 37 E12a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 15.77 12.44 15.76 38 ER13a ExonRegion 0 0.00 0.00 0.00 0.00 13.22 14.93 23.94 39 E13a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 18.72 13.02 22.47 40 ER14a ExonRegion 0 0.00 0.00 0.00 0.00 14.51 11.09 27.26 41 E14a_E15a KnownJunction 0 0.00 0.00 0.00 0.00 10.72 4.42 21.73 42 ER15a ExonRegion 0 0.00 0.00 0.33 0.69 14.30 14.33 24.39 43 E15a_E16a KnownJunction 0 0.00 0.00 0.00 3.36 17.13 9.76 19.98 44 ER16a ExonRegion 0 0.00 0.00 0.56 1.67 12.87 13.37 20.63 45 E16a_E17a KnownJunction 0 0.00 0.00 0.80 1.14 14.52 4.88 15.35 46 ER17a ExonRegion 0 0.00 0.00 0.68 0.09 11.00 7.04 18.21 47 E17a_E18a KnownJunction 0 0.00 0.00 1.44 0.00 11.11 5.57 15.69 48 ER18a ExonRegion 0 0.00 0.00 0.90 0.00 16.45 10.27 14.66 49 E18a_E19a KnownJunction 0 0.00 0.00 0.00 0.00 7.22 9.00 13.21 50 ER19a ExonRegion 0 0.00 0.00 0.59 0.00 9.91 8.92 16.95 51 E19a_E20a KnownJunction 0 0.00 0.00 0.73 0.00 15.49 2.68 14.12 52 ER20a ExonRegion 0 0.00 0.00 0.19 0.00 12.34 7.18 23.56 53 E20a_E21a KnownJunction 0 0.00 0.00 0.50 0.00 9.52 9.27 18.82 54 ER21a ExonRegion 0 0.00 0.00 1.23 0.00 18.34 14.70 26.96 55 E21a_E22a KnownJunction 0 0.00 0.00 0.00 0.00 34.76 4.69 32.46 56 ER22a ExonRegion 0 0.44 0.00 1.29 0.94 22.71 15.71 45.74 57 E22a_E23a KnownJunction 0 0.88 0.00 1.94 1.06 7.17 17.74 37.98 58 ER23a ExonRegion 0 0.19 0.00 0.86 0.47 11.32 14.58 33.69 59 E23a_E24a KnownJunction 0 0.00 0.00 1.44 1.54 19.41 17.55 38.45 60 ER24a ExonRegion 0 0.00 0.00 0.99 1.41 23.80 9.56 34.55 61 E24a_E25a KnownJunction 0 0.00 0.00 0.56 0.00 11.34 0.00 16.81 62 ER25a ExonRegion 0 0.00 0.00 0.32 0.89 11.72 3.91 21.31 63 E25a_E26a KnownJunction 0 0.00 0.00 0.79 3.01 12.84 5.84 16.40 64 ER26a ExonRegion 0 0.00 0.00 0.14 0.71 8.60 9.99 16.51 65 E26a_E27a KnownJunction 0 0.00 0.00 0.00 0.00 3.20 5.84 10.69 66 ER27a ExonRegion 0 0.00 0.00 0.00 0.88 11.58 6.95 17.40 67 E27a_E28a KnownJunction 0 0.00 0.00 0.00 0.00 11.80 4.26 22.26 68 ER28a ExonRegion 0 0.00 0.00 0.43 0.35 9.00 6.36 12.02 69 E28a_E29a KnownJunction 0 0.00 0.00 0.00 1.68 3.32 9.22 9.57 70 ER29a ExonRegion 0 0.00 0.00 0.60 1.05 9.81 5.66 13.96 71 E29_Da KnownBoundary 0 0.00 0.00 1.62 1.68 11.39 2.47 8.36 72 ER29b ExonRegion 0 0.03 0.00 0.28 0.02 4.56 3.08 6.71