Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CASP8	Gene	0	53.60	30.81	49.87	29.29	29.21	8.15	44.81
2	392258	Transcript	0	1.26	0.00	0.62	0.00	0.25	0.00	0.00
3	339403	Transcript	0	5.22	5.88	7.01	13.14	1.04	7.34	3.04
4	303385	Transcript	0	0	0	0	0	0	0	0
5	264274	Transcript	0	0.00	0.00	0.79	2.82	0.00	0.00	0.00
6	392259	Transcript	0	0	0	0	0	0	0	0
7	392266	Transcript	0	0	0	0	0	0	0	0
8	264275	Transcript	0	0.00	0.00	0.21	0.00	0.00	0.00	0.00
9	343290	Transcript	0	5.46	1.08	4.31	1.11	0.90	1.13	0.59
10	358485	Transcript	0	2.66	2.64	1.12	0.65	1.18	0.00	2.11
11	392261	Transcript	0	16.21	8.48	12.61	6.43	27.78	5.47	11.70
12	392264	Transcript	0	0.62	0.00	0.66	0.00	0.00	0.00	0.73
13	323492	Transcript	0	0.68	3.03	0.67	0.03	0.00	0.00	1.20
14	392263	Transcript	0	0	0	0	0	0	0	0
15	ER1a	ExonRegion	0	0.00	1.16	1.06	0.00	0.00	0.00	0.00
16	ER1b	ExonRegion	1	32.34	23.62	24.11	41.78	16.65	2.43	37.30
17	E1_Da	KnownBoundary	0	24.43	28.90	12.30	13.98	1.94	4.93	19.32
18	E1a_E2a	KnownJunction	1	22.77	2.71	11.73	10.62	1.18	0.00	10.40
19	ER1c	ExonRegion	0	12.04	25.53	7.35	14.41	1.55	2.70	9.65
20	E1_Db	NovelBoundary	0	1.03	9.69	0.00	2.68	0.00	0.00	0.00
21	E1b_E2a	KnownJunction	0	3.45	16.50	3.64	14.95	1.04	1.53	3.94
22	ER2a	ExonRegion	1	24.34	34.59	21.99	29.37	7.15	3.32	26.38
23	E2a_E5a	KnownJunction	0	26.60	23.09	33.27	27.28	13.65	7.66	35.79
24	ER3a	ExonRegion	0	0.77	0.00	0.00	0.00	0.00	0.00	0.55
25	ER3b	ExonRegion	0	16.65	4.76	9.63	3.01	0.44	2.55	18.86
26	E3_Ac	KnownBoundary	1	29.09	13.35	15.78	6.29	1.01	5.95	40.07
27	ER3c	ExonRegion	0	26.32	12.72	18.93	9.66	0.27	4.22	31.57
28	E3_Da	KnownBoundary	0	9.76	4.52	11.81	5.77	0.00	0.00	0.86
29	E3a_E5a	KnownJunction	0	4.69	5.57	6.51	4.33	0.00	0.00	17.67
30	ER3d	ExonRegion	0	12.74	6.87	8.10	3.52	0.40	0.98	7.10
31	E3b_E5a	KnownJunction	0	4.56	5.28	2.24	1.30	2.35	0.00	3.67
32	E3b_E5b	KnownJunction	0	0.62	0.00	0.66	0.00	0.00	0.00	0.73
33	ER4a	ExonRegion	0	1.37	1.64	1.33	0.07	0.00	0.00	1.65
34	E4a_E5a	KnownJunction	0	0.00	4.41	0.00	0.00	0.00	0.00	0.76
35	E5_Aa	NovelBoundary	1	1.89	0.00	0.00	9.48	0.00	0.00	3.91
36	E5_Ab	NovelBoundary	0	50.87	37.38	40.06	22.68	14.22	9.14	41.62
37	ER5a	ExonRegion	0	42.35	39.10	40.02	29.47	15.39	7.49	56.12
38	ER5b	ExonRegion	0	64.91	51.67	66.76	47.67	17.74	8.69	56.12
39	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	E5a_E7a	KnownJunction	0	82.35	50.94	87.00	35.81	9.27	13.24	64.06
41	E5a_E8a	NovelJunction	1	2.42	7.72	5.22	9.64	0.00	0.00	1.52
42	ER6a	ExonRegion	0	0.00	0.00	0.06	0.00	0.00	0.00	0.00
43	E6a_E7a	KnownJunction	0	0.00	0.00	0.57	0.00	0.00	0.00	0.00
44	E7_Aa	NovelBoundary	1	30.96	0.00	39.65	0.00	0.00	1.10	1.25
45	ER7a	ExonRegion	0	62.57	54.24	76.91	41.22	19.01	16.69	62.89
46	E7a_E8a	KnownJunction	0	45.16	56.72	55.91	44.97	15.24	16.67	53.56
47	ER8a	ExonRegion	0	44.09	46.30	59.30	41.78	13.97	9.27	60.08
48	E8a_E9a	KnownJunction	0	30.51	15.34	29.56	18.26	7.33	4.31	27.95
49	E8a_E10a	KnownJunction	1	16.02	9.83	12.95	10.40	6.32	0.00	11.35
50	E8a_E11a	KnownJunction	0	5.22	5.88	7.01	13.14	1.04	7.34	3.04
51	E8a_E14a	KnownJunction	0	0.00	0.00	0.79	2.82	0.00	0.00	0.00
52	ER9a	ExonRegion	0	31.34	25.11	42.90	17.37	10.76	3.30	39.23
53	E9a_E10a	KnownJunction	1	21.70	25.67	34.52	11.22	9.66	1.31	36.65
54	E9a_E11a	KnownJunction	0	3.86	4.99	4.70	2.47	0.00	0.00	0.82
55	ER10a	ExonRegion	0	60.41	35.75	58.82	29.12	20.21	5.04	59.68
56	E10a_E11a	KnownJunction	0	70.58	38.88	63.33	29.64	21.83	9.73	67.34
57	ER11a	ExonRegion	0	93.36	56.87	92.38	45.88	34.94	13.59	79.25
58	E11_Da	NovelBoundary	1	51.12	10.11	47.70	6.01	0.00	0.00	9.85
59	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
60	E11b_E12b	KnownJunction	0	5.46	1.08	4.31	1.11	0.90	1.13	0.59
61	E11b_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
62	E11b_E14a	KnownJunction	0	92.51	26.38	73.17	36.98	34.67	8.36	88.12
63	ER11b	ExonRegion	0	104.70	40.09	81.29	44.27	74.30	14.71	96.47
64	E12_Ab	NovelBoundary	0	1395.93	1078.02	1324.61	1107.24	316.52	1006.25	638.88
65	ER12a	ExonRegion	0	3.69	0.73	4.20	2.99	27.53	2.21	2.70
66	ER12b	ExonRegion	1	84.57	42.54	73.08	37.58	274.06	24.01	34.11
67	E12_Da	KnownBoundary	0	2536.74	1592.89	1725.52	1412.50	949.50	1204.68	1326.29
68	ER12c	ExonRegion	0	56.48	27.62	39.71	18.41	83.58	19.67	26.42
69	E12_Db	NovelBoundary	1	4.96	1.63	15.09	0.00	1.13	0.00	8.97
70	E13_Aa	NovelBoundary	1	37.65	3.26	46.50	11.76	0.99	14.98	66.87
71	ER13a	ExonRegion	0	2.53	0.00	1.24	0.00	0.50	0.00	0.00
72	E13_Da	NovelBoundary	0	8.03	2.60	13.94	1.38	0.00	6.70	5.53
73	ER14a	ExonRegion	0	100.03	56.91	85.54	63.97	30.35	9.73	90.19
74	E14a_E15a	KnownJunction	1	87.82	50.31	70.46	54.89	28.15	5.55	91.84
75	I14	Intron	1	4.72	1.29	13.09	1.83	1.12	2.69	7.18
76	I14_SR1	SilentIntronRegion	1	4.73	1.30	13.12	1.83	1.12	2.70	7.19
77	E15_Aa	NovelBoundary	1	9.20	0.00	13.25	4.25	0.00	3.19	1.28
78	ER15a	ExonRegion	0	127.18	58.68	104.21	58.39	34.45	11.80	111.05
79	E15_Da	KnownBoundary	0	53.27	49.65	61.06	50.63	21.74	10.05	50.91
80	ER15b	ExonRegion	0	47.69	19.31	49.09	20.04	21.70	6.35	38.45