Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	NR4A2	Gene	0	534.63	307.38	378.95	370.95	0.77	2355.22	5.52
2	409572	Transcript	0	4.61	8.59	2.74	4.89	0.33	8.78	0.16
3	339562	Transcript	0	320.24	184.11	254.44	236.91	0.25	1654.37	3.64
4	409108	Transcript	0	2.37	0.89	8.41	2.60	0.00	1.66	0.00
5	ER1a	ExonRegion	0	8.35	17.18	5.48	9.79	0.67	14.83	0.33
6	E1a_E3a	KnownJunction	0	0.87	0.00	0.00	0.00	0.00	2.73	0.00
7	ER2a	ExonRegion	0	107.44	112.82	82.25	132.90	0.00	787.78	1.39
8	E2a_E3a	KnownJunction	0	359.45	257.20	330.76	330.43	0.00	2209.27	4.04
9	E2a_E4a	NovelJunction	0	14.89	21.12	12.66	29.31	0.00	265.05	0.00
10	I2_AR2	ActiveIntronRegion	0	78.94	29.90	76.69	29.44	0.00	11.92	1.46
11	ER3a	ExonRegion	0	507.14	371.13	471.82	475.94	0.00	3053.93	7.04
12	E3_Ab	KnownBoundary	0	690.46	505.75	595.26	668.20	0.00	4191.16	10.93
13	ER3b	ExonRegion	0	458.09	434.08	385.43	523.47	0.00	3759.03	6.50
14	E3_Da	NovelBoundary	0	81.86	33.39	119.25	46.81	0.00	37.04	0.82
15	E3a_E4a	KnownJunction	0	255.16	379.44	228.36	428.07	0.00	3398.69	3.18
16	I3	Intron	0	78.26	25.95	103.91	36.75	0.17	34.33	0.95
17	I3_SR1	SilentIntronRegion	0	70.53	20.93	83.89	37.21	0.31	34.32	0.53
18	I3_AR1	ActiveIntronRegion	0	81.65	28.02	112.12	36.78	0.12	34.52	1.12
19	ER4a	ExonRegion	0	362.93	376.02	296.28	427.07	0.45	2457.19	6.01
20	E4a_E5a	KnownJunction	0	1207.95	435.53	528.53	480.33	2.01	2775.52	5.40
21	E5_Aa	NovelBoundary	0	185.14	15.61	211.49	74.85	0.88	61.45	0.70
22	ER5a	ExonRegion	0	1175.44	474.86	613.88	573.89	2.07	3385.55	6.10
23	E5_Da	NovelBoundary	0	111.32	20.33	114.63	29.50	0.97	33.90	0.89
24	E5a_E6a	KnownJunction	0	1075.73	405.50	570.11	541.12	0.00	3228.70	4.61
25	E5a_E7a	NovelJunction	1	1.94	0.00	4.51	11.27	0.00	34.89	0.00
26	ER6a	ExonRegion	0	778.42	345.02	460.61	396.54	0.60	2396.24	4.44
27	E6a_E7a	KnownJunction	0	508.98	300.86	385.50	370.69	1.08	2268.14	6.89
28	E7_Aa	NovelBoundary	1	57.76	10.77	138.40	25.68	0.00	28.09	2.45
29	ER7a	ExonRegion	0	454.51	388.43	436.13	463.67	1.36	2540.84	7.83
30	E7a_E8a	KnownJunction	0	294.06	320.33	322.56	492.08	0.00	2320.65	5.16
31	E7a_E8b	NovelJunction	0	132.90	105.40	89.97	91.65	0.00	636.31	0.00
32	E7b_E8b	KnownJunction	0	0.00	0.00	0.52	0.00	0.00	0.00	0.00
33	ER7b	ExonRegion	0	4.75	1.79	16.30	5.21	0.00	3.32	0.00
34	ER8a	ExonRegion	0	449.99	350.75	412.61	460.91	0.66	2416.16	5.48
35	E8_Ab	KnownBoundary	0	554.96	377.91	443.01	458.98	0.00	2499.91	6.12
36	ER8b	ExonRegion	0	596.66	438.58	480.07	511.15	0.88	2973.15	7.40
37	E8a_E9a	KnownJunction	0	614.92	467.71	473.62	535.75	0.90	3235.43	6.51
38	ER9a	ExonRegion	0	1480.80	604.95	914.03	731.29	1.59	4798.54	9.24
39	E9_Da	KnownBoundary	0	1299.53	583.09	784.40	710.57	3.00	4642.98	9.63
40	ER9b	ExonRegion	0	705.68	338.84	489.44	419.82	1.01	2882.86	6.60
41	E9_Db	KnownBoundary	0	221.99	175.70	133.07	234.50	0.00	2040.48	2.14
42	ER9c	ExonRegion	0	493.83	182.31	350.30	247.41	0.75	1966.08	5.47
43	IG5_AR22	ActiveIntergenicRegion	0	0.80	0.00	0.35	0.00	9.86	0.00	2.46
44	IG5_AR17	ActiveIntergenicRegion	0	4.36	0.00	0.27	0.00	13.87	0.65	2.14