Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	LY75	Gene	0	51.71	18.06	46.99	13.60	20.56	24.00	5.88
2	263636	Transcript	1	31.39	15.25	28.23	11.81	15.78	2.78	1.37
3	409827	Transcript	0	1.67	1.39	3.29	0.00	0.95	0.00	0.00
4	409803	Transcript	0	6.36	1.08	2.97	0.00	0.00	0.00	0.00
5	259053	Transcript	1	18.11	3.55	15.77	3.24	9.56	25.21	5.83
6	IG28	Intergenic	0	9.49	1.04	1.64	0.27	0.63	0.93	2.60
7	IG28_AR23	ActiveIntergenicRegion	0	36.65	2.82	7.00	0.00	1.72	1.42	8.88
8	IG28_SR12	SilentIntergenicRegion	0	26.30	1.17	5.22	0.18	0.71	0.69	6.96
9	IG28_SR11	SilentIntergenicRegion	0	14.55	0.52	2.97	0.27	1.42	1.44	5.75
10	IG28_AR21	ActiveIntergenicRegion	0	37.00	1.99	6.26	0.00	2.42	0.71	3.96
11	IG28_AR18	ActiveIntergenicRegion	0	25.09	3.28	4.75	0.23	2.41	0.66	11.57
12	IG28_AR17	ActiveIntergenicRegion	0	32.47	4.86	9.71	1.25	5.94	3.63	13.77
13	IG28_SR9	SilentIntergenicRegion	0	15.13	3.20	4.69	0.78	2.78	1.12	6.13
14	IG28_AR15	ActiveIntergenicRegion	0	19.22	3.78	3.73	0.49	2.35	0.00	9.84
15	IG28_AR14	ActiveIntergenicRegion	0	13.95	3.74	4.12	0.19	4.24	0.00	7.73
16	IG28_AR13	ActiveIntergenicRegion	0	12.78	2.55	3.40	0.00	4.80	0.00	7.77
17	IG28_AR12	ActiveIntergenicRegion	0	17.52	3.64	5.83	1.12	3.08	0.00	8.10
18	IG28_AR11	ActiveIntergenicRegion	0	12.54	0.97	4.87	0.87	2.37	0.00	6.11
19	IG28_AR10	ActiveIntergenicRegion	0	29.26	3.95	4.69	0.98	2.00	6.72	5.46
20	IG28_SR7	SilentIntergenicRegion	0	9.48	0.00	1.71	0.00	0.36	0.00	1.50
21	ER1a	ExonRegion	0	3.60	3.67	2.08	3.59	0.44	0.00	0.00
22	E1_Ab	KnownBoundary	1	9.13	7.04	7.06	10.54	3.04	0.00	0.00
23	ER1b	ExonRegion	1	8.26	6.69	5.15	11.53	2.17	0.00	0.00
24	E1a_E2a	KnownJunction	1	0.95	1.58	1.45	13.79	0.00	0.00	0.00
25	I1_AR2	ActiveIntronRegion	1	24.21	10.20	15.17	8.93	7.28	1.54	0.65
26	ER2a	ExonRegion	1	17.03	16.69	20.20	16.45	6.15	0.93	0.30
27	E2a_E3a	KnownJunction	1	28.02	8.75	30.22	18.77	5.26	1.47	0.59
28	ER3a	ExonRegion	1	30.53	22.56	28.69	17.86	10.93	2.49	1.05
29	E3a_E4a	KnownJunction	1	32.31	23.41	39.63	17.18	8.67	2.81	0.82
30	ER4a	ExonRegion	1	31.93	22.87	31.85	14.09	8.56	1.71	0.83
31	E4a_E5a	KnownJunction	1	22.98	28.77	31.67	16.63	6.64	1.47	1.62
32	ER5a	ExonRegion	1	34.84	23.93	35.24	18.43	7.81	2.81	0.31
33	E5a_E6a	KnownJunction	1	29.61	17.42	26.83	20.07	5.09	4.26	0.00
34	ER6a	ExonRegion	1	27.89	26.59	30.83	19.72	10.58	4.56	1.27
35	E6a_E7a	KnownJunction	1	30.46	23.04	37.56	15.90	16.37	6.19	0.89
36	ER7a	ExonRegion	1	35.92	31.07	44.50	17.96	17.46	2.18	0.80
37	E7a_E8a	KnownJunction	1	36.33	39.28	46.32	26.01	12.40	0.00	1.73
38	ER8a	ExonRegion	1	41.54	34.22	50.24	26.79	20.61	3.37	0.82
39	E8a_E9a	KnownJunction	1	38.39	22.83	41.60	20.56	12.43	3.08	0.00
40	ER9a	ExonRegion	1	65.75	22.21	56.95	27.35	19.53	1.30	0.36
41	E9a_E10a	KnownJunction	1	82.93	20.54	72.86	22.35	24.44	1.50	0.69
42	ER10a	ExonRegion	1	79.96	27.33	71.61	24.22	20.84	3.46	0.13
43	E10a_E11a	KnownJunction	1	114.28	36.31	77.94	25.93	15.72	2.95	0.00
44	ER11a	ExonRegion	1	99.46	26.85	74.43	21.95	20.70	1.83	0.14
45	E11a_E12a	KnownJunction	1	51.81	11.56	39.14	13.38	9.29	1.10	0.83
46	ER12a	ExonRegion	1	41.48	17.68	47.61	12.89	11.56	0.50	0.39
47	E12a_E13a	KnownJunction	1	45.28	16.95	46.03	6.29	7.49	1.07	0.00
48	ER13a	ExonRegion	1	61.03	30.83	53.56	22.39	20.76	9.40	0.00
49	E13a_E14a	KnownJunction	1	72.23	36.78	49.51	19.67	16.37	10.02	0.00
50	ER14a	ExonRegion	1	58.92	32.86	47.32	20.96	12.68	3.93	0.16
51	E14a_E15a	KnownJunction	1	48.05	21.54	40.41	14.14	15.33	0.00	0.72
52	ER15a	ExonRegion	1	50.05	26.90	41.04	18.38	17.57	2.49	0.56
53	E15a_E16a	KnownJunction	1	56.01	30.42	45.34	18.31	24.51	6.65	0.00
54	ER16a	ExonRegion	1	40.03	26.82	44.22	14.22	15.17	2.44	0.39
55	E16a_E17a	KnownJunction	1	39.92	16.03	29.95	8.37	11.69	0.00	0.59
56	ER17a	ExonRegion	1	45.30	21.06	36.18	6.55	14.60	0.10	0.19
57	E17a_E18a	KnownJunction	1	31.64	17.76	25.00	2.90	14.64	0.00	0.00
58	ER18a	ExonRegion	1	51.69	30.07	58.07	11.32	18.41	2.28	0.25
59	E18a_E19a	KnownJunction	1	71.18	33.50	65.47	14.71	22.61	3.06	0.60
60	ER19a	ExonRegion	1	82.75	35.14	69.63	16.89	29.88	0.94	0.20
61	E19a_E20a	KnownJunction	1	66.44	35.52	55.50	21.27	31.01	0.00	0.57
62	ER20a	ExonRegion	1	60.69	35.31	63.56	16.19	19.39	0.00	1.08
63	E20a_E21a	KnownJunction	1	58.28	42.14	61.53	11.87	17.77	0.00	1.42
64	ER21a	ExonRegion	1	71.51	29.13	69.68	18.50	25.71	2.52	0.78
65	E21a_E22a	KnownJunction	1	67.16	20.47	66.79	12.08	19.25	1.26	0.53
66	ER22a	ExonRegion	1	51.78	28.27	63.59	12.50	21.15	2.21	0.52
67	E22a_E23a	KnownJunction	1	49.95	32.58	68.65	13.52	18.12	1.45	0.00
68	ER23a	ExonRegion	1	55.62	25.59	53.73	10.67	14.69	0.40	0.00
69	E23a_E24a	KnownJunction	1	51.87	10.32	56.82	13.57	14.27	0.00	0.00
70	ER24a	ExonRegion	1	65.64	11.12	61.05	12.25	20.06	0.72	0.02
71	E24a_E25a	KnownJunction	1	76.47	13.82	64.06	10.94	18.95	0.00	0.00
72	ER25a	ExonRegion	1	74.38	27.62	64.62	13.83	18.55	2.05	0.21
73	E25a_E26a	KnownJunction	1	61.45	26.85	63.19	9.27	18.88	0.00	0.00
74	ER26a	ExonRegion	1	66.93	21.00	58.68	15.61	17.83	1.43	0.48
75	E26a_E27a	KnownJunction	1	78.96	18.63	65.16	15.04	24.51	3.97	0.89
76	ER27a	ExonRegion	1	96.35	27.08	82.15	24.95	30.76	1.91	0.67
77	E27a_E28a	KnownJunction	1	120.47	32.42	99.72	22.32	25.61	0.00	1.92
78	ER28a	ExonRegion	1	94.89	27.96	89.76	20.38	27.48	0.50	0.56
79	E28a_E29a	KnownJunction	0	93.95	11.45	127.64	11.00	41.59	1.58	0.00
80	ER29a	ExonRegion	1	63.30	18.67	74.06	8.19	22.39	0.29	0.72
81	E29a_E30a	KnownJunction	1	61.90	20.18	71.61	10.24	16.32	1.31	0.63
82	ER30a	ExonRegion	1	82.73	29.26	78.09	11.30	25.60	1.52	0.48
83	E30a_E31a	KnownJunction	1	102.89	19.86	100.02	14.03	37.05	0.00	0.00
84	ER31a	ExonRegion	1	107.83	32.10	79.37	22.21	32.58	4.84	0.61
85	E31a_E32a	KnownJunction	1	76.19	25.04	58.79	13.25	29.21	1.37	0.00
86	ER32a	ExonRegion	1	61.56	22.84	54.74	17.91	26.13	2.30	0.68
87	E32a_E33a	KnownJunction	1	43.78	22.33	53.17	17.20	22.41	2.60	0.00
88	ER33a	ExonRegion	1	46.15	20.87	45.56	15.75	23.49	3.62	0.75
89	E33a_E34a	KnownJunction	1	37.87	19.39	49.71	8.75	15.19	5.55	0.76
90	E33a_E37a	KnownJunction	0	1.67	1.39	3.29	0.00	0.95	0.00	0.00
91	ER34a	ExonRegion	1	49.85	21.85	49.31	15.52	23.46	6.63	1.00
92	E34a_E35a	KnownJunction	1	38.55	23.72	40.70	17.74	26.44	1.21	1.78
93	E34a_E37a	KnownJunction	0	6.36	1.08	2.97	0.00	0.00	0.00	0.00
94	E35_Aa	NovelBoundary	0	4.61	4.89	6.19	8.61	5.33	4.53	0.00
95	ER35a	ExonRegion	0	52.02	18.35	41.90	14.08	20.47	7.14	2.32
96	ER36a	ExonRegion	1	4.41	0.83	2.36	0.00	2.24	9.61	1.25
97	E36a_E37a	KnownJunction	0	3.61	0.00	1.97	0.00	0.00	3.73	0.62
98	ER37a	ExonRegion	1	13.88	2.12	10.05	2.66	2.58	18.22	3.34
99	E37_Da	NovelBoundary	0	5.42	8.49	2.74	5.74	0.00	0.00	7.40
100	E37a_E38a	KnownJunction	1	18.03	2.92	15.68	3.17	8.05	33.50	5.13
101	ER38a	ExonRegion	1	32.99	8.19	27.16	7.07	16.18	69.36	11.71
102	E38_Da	NovelBoundary	0	1.57	3.07	2.77	5.07	0.00	10.96	9.75
103	E38a_E39a	KnownJunction	1	40.01	8.17	34.49	7.26	10.93	85.60	10.71
104	I38	Intron	0	7.41	4.20	3.66	6.59	0.00	5.69	8.09
105	I38_SR1	SilentIntronRegion	0	7.46	4.22	3.68	6.63	0.00	5.71	8.15
106	E39_Aa	NovelBoundary	0	7.31	4.86	3.68	9.18	0.00	11.60	7.75
107	ER39a	ExonRegion	1	54.55	6.16	40.64	10.80	17.87	85.02	16.65
108	E39_Da	NovelBoundary	0	9.91	9.17	1.45	6.72	0.00	10.83	3.38
109	E39a_E40a	KnownJunction	1	76.24	4.68	47.09	7.88	12.59	65.07	8.76
110	I39_SR1	SilentIntronRegion	0	3.69	3.49	2.31	3.75	0.27	5.20	7.50
111	E40a_E41a	KnownJunction	1	31.64	1.63	29.93	3.74	12.98	68.71	4.61
112	ER40a	ExonRegion	1	73.57	4.99	51.13	8.08	14.19	87.41	9.64
113	I40	Intron	0	8.81	6.14	6.24	3.88	2.77	4.74	9.02
114	I40_SR1	SilentIntronRegion	0	8.95	6.75	5.67	4.19	2.95	5.53	9.19
115	I40_AR1	ActiveIntronRegion	0	8.50	4.69	7.61	3.15	2.34	2.85	8.66
116	E41_Aa	NovelBoundary	0	29.69	1.63	27.33	2.47	3.53	5.33	19.85
117	ER41a	ExonRegion	1	76.89	9.99	63.25	10.69	20.09	79.99	19.73
118	E41_Da	KnownBoundary	1	76.01	7.15	54.78	8.75	11.43	65.93	11.47
119	ER41b	ExonRegion	1	46.32	9.81	42.99	9.72	26.45	62.30	15.63
120	IG27	Intergenic	0	10.59	6.25	17.57	7.09	15.14	9.93	12.25
121	IG27_AR1	ActiveIntergenicRegion	0	10.66	6.29	17.68	7.15	15.23	10.01	12.33