Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	FAHD2B	Gene	0	14.63	32.46	4.41	10.32	79.63	11.11	54.61
2	272610	Transcript	0	9.34	18.25	2.85	6.83	60.93	7.05	39.90
3	ER1a	ExonRegion	0	11.50	20.22	1.28	11.75	34.63	7.51	19.78
4	E1a_E2a	KnownJunction	0	0.92	0.00	0.73	0.00	1.04	1.37	1.86
5	I1	Intron	0	4.58	10.81	1.83	2.22	4.90	1.72	2.17
6	I1_AR1	ActiveIntronRegion	1	4.02	19.33	1.67	4.61	2.74	1.97	3.74
7	I1_SR1	SilentIntronRegion	0	5.28	9.97	2.08	1.78	4.97	1.97	1.64
8	I1_AR2	ActiveIntronRegion	0	3.84	4.28	1.92	1.20	16.69	0.00	8.10
9	ER2a	ExonRegion	0	14.89	35.41	5.33	9.11	77.23	10.15	49.32
10	E2a_E3a	KnownJunction	0	19.48	28.79	4.61	12.98	110.01	9.59	63.46
11	E3_Aa	NovelBoundary	1	12.27	22.25	1.71	0.00	3.85	1.66	3.35
12	ER3a	ExonRegion	0	20.01	50.09	5.40	12.22	104.54	18.98	79.53
13	E3_Da	NovelBoundary	1	3.66	10.17	0.00	0.00	11.64	1.58	1.58
14	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	I3	Intron	1	4.47	12.81	1.94	1.79	10.57	0.63	2.97
16	I3_AR1	ActiveIntronRegion	1	8.36	16.83	3.29	1.20	14.10	0.88	5.01
17	I3_SR1	SilentIntronRegion	1	1.56	9.83	0.93	2.24	7.96	0.44	1.45
18	E4_Aa	NovelBoundary	0	8.65	23.67	1.42	6.58	8.69	2.97	4.10
19	ER4a	ExonRegion	1	5.89	10.16	5.06	7.09	118.60	8.95	65.15
20	E4_Da	NovelBoundary	0	12.68	33.10	2.36	6.42	14.50	6.00	9.73
21	E4a_E5a	KnownJunction	1	6.01	9.20	0.75	5.82	115.26	6.57	75.97
22	I4	Intron	1	7.49	27.57	2.04	2.71	12.19	2.02	9.20
23	I4_AR1	ActiveIntronRegion	1	7.54	27.75	2.05	2.73	12.27	2.03	9.27
24	E5_Aa	NovelBoundary	1	21.80	68.78	6.48	8.78	39.70	11.39	23.62
25	ER5a	ExonRegion	0	17.39	57.14	5.02	13.30	116.61	14.53	85.81
26	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	I5	Intron	0	3.12	9.55	0.82	0.76	7.09	1.24	1.65
28	I5_SR1	SilentIntronRegion	1	1.87	10.90	0.94	0.00	7.66	0.74	1.43
29	I5_AR1	ActiveIntronRegion	0	2.65	12.20	1.10	0.95	7.88	2.51	4.00
30	I5_SR2	SilentIntronRegion	1	3.48	8.73	0.60	0.27	8.09	1.25	0.99
31	I5_SR3	SilentIntronRegion	1	3.90	7.73	0.81	1.60	4.92	0.31	0.36
32	ER6a	ExonRegion	0	22.48	35.72	8.66	19.04	127.44	17.19	86.99
33	E6_Da	NovelBoundary	0	1.77	15.47	2.64	7.80	6.75	4.26	0.89
34	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	I6_AR1	ActiveIntronRegion	0	0.00	8.79	0.26	4.94	6.01	1.11	0.95
36	E7_Aa	NovelBoundary	1	3.14	19.76	2.63	18.61	8.39	1.66	1.75
37	ER7a	ExonRegion	0	13.13	12.02	3.81	5.89	80.69	7.05	50.18
38	E7_Da	NovelBoundary	0	5.92	10.77	0.00	6.42	5.46	3.19	1.62
39	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	ER8a	ExonRegion	0	8.42	15.02	2.04	5.27	27.89	3.83	20.46