Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AC073995.6	Gene	0	413.70	348.05	19.79	7.83	5.15	24.91	16.81
2	295246	Transcript	0	281.21	230.12	13.16	5.07	3.65	16.57	11.04
3	IG28_AR29	ActiveIntergenicRegion	0	22.94	92.91	1.27	3.73	1.72	8.71	3.57
4	IG28_AR27	ActiveIntergenicRegion	0	6.43	13.13	0.00	0.00	0.00	1.45	0.00
5	IG28_AR26	ActiveIntergenicRegion	0	28.42	22.02	1.28	1.72	0.71	0.00	0.91
6	IG28_AR25	ActiveIntergenicRegion	0	16.25	10.00	1.41	0.68	0.02	1.24	0.73
7	ER1a	ExonRegion	0	26.03	25.36	0.68	0.00	0.81	3.91	0.51
8	ER2a	ExonRegion	1	52.36	61.46	1.59	0.56	1.70	8.37	2.12
9	ER3a	ExonRegion	1	97.37	153.87	6.07	4.05	3.59	8.11	11.25
10	E3a_E4a	KnownJunction	0	87.89	173.21	6.83	0.00	1.18	7.58	4.77
11	E4a_E5a	KnownJunction	1	82.50	210.41	8.79	4.20	2.35	20.02	26.00
12	ER4a	ExonRegion	1	61.79	218.97	7.61	4.34	4.08	10.48	17.26
13	ER5a	ExonRegion	1	97.20	256.58	9.59	5.21	4.22	17.47	20.73
14	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	ER6a	ExonRegion	1	180.13	338.02	19.20	7.31	10.00	10.57	30.80
17	ER7a	ExonRegion	1	288.68	470.78	27.57	16.06	9.46	26.03	49.37
18	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	E7a_E10a	NovelJunction	0	34.31	36.78	5.12	0.00	0.00	1.66	2.59
20	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER8a	ExonRegion	1	258.86	446.61	21.86	20.98	10.30	28.87	37.41
22	ER9a	ExonRegion	1	69.32	142.65	5.95	8.08	1.26	6.85	10.88
23	E9a_E10a	KnownJunction	0	1.77	0.00	0.00	0.00	0.00	0.00	0.00
24	E10_Aa	NovelBoundary	1	1057.99	639.84	46.92	16.44	19.39	23.66	8.74
25	ER10a	ExonRegion	0	19.49	2.77	1.09	0.00	11.76	0.02	0.48
26	E10_Da	NovelBoundary	0	715.91	442.91	26.86	17.20	27.76	16.35	23.36
27	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	E11a_E12a	KnownJunction	0	0.72	0.00	0.00	0.00	0.00	0.00	0.00
29	ER11a	ExonRegion	1	143.88	151.69	14.44	0.39	9.72	12.85	9.19
30	ER12a	ExonRegion	0	255.23	289.87	19.38	4.03	6.37	18.51	19.22
31	E12a_E13a	KnownJunction	1	132.84	162.17	7.66	4.28	1.01	4.15	10.39
32	E13a_E14a	KnownJunction	1	147.51	175.81	0.79	3.03	5.21	9.22	8.41
33	ER13a	ExonRegion	0	188.96	223.45	6.03	4.86	3.38	9.05	12.84
34	ER14a	ExonRegion	0	246.92	269.25	14.53	3.62	4.62	19.60	16.01
35	E14a_E15a	KnownJunction	1	243.02	256.09	16.02	6.26	11.50	27.68	25.52
36	E15a_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	ER15a	ExonRegion	0	358.25	404.59	29.52	3.40	14.02	39.82	30.43
38	ER16a	ExonRegion	0	323.66	392.03	18.43	3.88	4.10	33.50	23.86
39	E16a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	E17a_E18a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	ER17a	ExonRegion	0	405.87	518.07	20.02	8.69	8.96	42.23	27.22
42	ER18a	ExonRegion	0	387.91	380.53	20.49	5.48	6.41	32.67	26.03
43	E18a_E19a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	E19a_E20a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
45	ER19a	ExonRegion	0	223.40	189.35	10.70	3.74	10.00	12.89	11.93
46	ER20a	ExonRegion	0	73.61	78.54	3.23	3.19	4.01	4.56	2.54
47	E20_Da	NovelBoundary	0	2608.20	1575.26	138.90	34.95	30.20	129.58	96.74
48	E20a_E21a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
49	E21a_E22a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
50	ER21a	ExonRegion	0	0.52	0.39	0.03	0.00	0.00	0.00	0.00
51	E22_Aa	NovelBoundary	0	459.94	204.26	16.99	10.81	26.23	12.81	11.05
52	ER22a	ExonRegion	0	255.43	214.18	8.07	4.35	2.43	18.49	9.04
53	E22a_E23a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
54	E22a_E37a	NovelJunction	1	101.46	78.10	11.09	3.09	7.35	9.09	7.87
55	ER23a	ExonRegion	0	834.24	845.16	35.37	15.32	5.91	57.00	34.00
56	E23a_E24a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
57	E24a_E25a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
58	ER24a	ExonRegion	0	603.09	756.56	30.51	21.93	2.60	51.83	26.66
59	ER25a	ExonRegion	0	478.31	448.67	23.79	14.81	3.61	29.74	14.83
60	E25a_E26a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
61	E26a_E27a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
62	ER26a	ExonRegion	0	37.07	29.70	3.50	0.86	0.00	0.76	2.12
63	ER27a	ExonRegion	0	2.48	3.53	0.26	0.00	0.00	0.00	0.19
64	E27a_E28a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
65	E28a_E29a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
66	ER28a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
67	ER29a	ExonRegion	0	345.04	307.74	19.10	7.58	1.09	17.79	9.56
68	E29a_E30a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
69	E30a_E31a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
70	ER30a	ExonRegion	0	700.44	696.74	30.20	15.69	3.49	38.98	16.12
71	ER31a	ExonRegion	0	650.22	714.27	27.01	13.07	5.56	51.46	16.22
72	E31a_E32a	KnownJunction	0	439.03	546.95	23.96	8.89	9.52	28.97	22.07
73	E32a_E33a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
74	ER32a	ExonRegion	0	531.86	638.64	25.34	13.03	4.72	37.41	17.31
75	ER33a	ExonRegion	0	206.97	236.61	9.20	6.25	0.28	15.90	5.60
76	E33a_E34a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
77	E34a_E35a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
78	ER34a	ExonRegion	0	379.87	372.29	16.91	7.78	1.87	33.36	9.56
79	ER35a	ExonRegion	1	614.65	450.41	27.14	7.82	2.56	37.91	12.57
80	E35a_E36a	KnownJunction	0	534.86	363.44	23.32	13.30	1.06	25.41	11.31
81	E36a_E37a	KnownJunction	0	610.35	417.77	26.15	7.91	10.49	53.44	17.67
82	ER36a	ExonRegion	0	794.38	531.52	36.46	12.99	5.39	49.25	18.00
83	ER37a	ExonRegion	0	888.22	538.17	38.43	10.62	8.22	45.85	19.45
84	E37a_E38a	KnownJunction	1	527.37	356.50	18.41	6.99	2.14	24.07	10.19
85	E38a_E39a	KnownJunction	1	622.00	577.68	22.68	16.44	5.35	40.76	11.24
86	ER38a	ExonRegion	1	817.27	626.57	29.45	11.91	3.91	44.18	15.42
87	ER39a	ExonRegion	1	1040.87	638.52	36.26	15.75	7.72	44.37	19.43
88	E39a_E40a	KnownJunction	0	758.62	400.25	27.26	5.91	15.81	19.46	19.18
89	E40a_E41a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
90	ER40a	ExonRegion	0	1243.25	632.19	53.86	26.10	24.77	62.19	39.78
91	ER41a	ExonRegion	0	1036.73	541.74	40.85	20.14	13.61	43.13	28.26
92	E41a_E42a	KnownJunction	1	274.57	1.44	5.91	0.00	3.27	0.00	4.20
93	E42a_E43a	KnownJunction	1	460.61	0.00	16.32	0.00	2.33	0.00	8.53
94	ER42a	ExonRegion	1	864.44	400.65	29.15	8.69	6.03	24.73	14.19
95	ER43a	ExonRegion	0	804.17	506.83	32.02	9.36	6.97	38.74	18.33
96	E43a_E44a	KnownJunction	0	480.37	410.57	21.60	8.72	4.06	35.38	12.94
97	I43	Intron	1	130.43	37.91	3.23	0.77	0.95	2.33	0.25
98	I43_AR1	ActiveIntronRegion	0	209.59	72.28	3.98	0.00	0.20	2.45	1.26
99	I43_SR2	SilentIntronRegion	1	221.93	63.41	4.02	0.00	2.13	3.37	0.49
100	I43_AR2	ActiveIntronRegion	1	173.60	35.00	3.56	0.25	0.63	4.90	0.16
101	I43_AR3	ActiveIntronRegion	1	154.07	28.82	2.68	0.98	0.00	0.65	0.00
102	I43_SR3	SilentIntronRegion	1	178.83	46.94	4.87	2.30	0.21	0.93	0.00
103	I43_AR4	ActiveIntronRegion	1	114.63	44.98	4.82	1.98	0.00	2.15	0.00
104	E44a_E45a	KnownJunction	1	615.24	386.24	21.18	2.76	3.16	20.07	6.43
105	ER44a	ExonRegion	1	724.85	535.08	28.71	8.04	3.66	39.44	14.07
106	ER45a	ExonRegion	1	671.56	382.78	28.37	9.39	3.20	19.95	10.22
107	E45a_E46a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
108	I45	Intron	1	187.46	67.21	4.70	1.63	0.42	3.21	0.23
109	I45_AR1	ActiveIntronRegion	1	282.00	94.38	6.53	2.91	0.87	3.15	0.39
110	I45_SR2	SilentIntronRegion	1	150.91	57.54	4.06	1.06	0.22	3.57	0.16
111	E46a_E47a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
112	ER46a	ExonRegion	0	540.90	300.78	24.78	8.77	2.43	18.60	24.01
113	ER47a	ExonRegion	0	501.97	320.62	26.84	5.64	2.49	23.28	22.37
114	E47a_E48a	KnownJunction	1	507.06	285.86	26.10	7.83	1.18	27.15	10.43
115	E48a_E49a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
116	ER48a	ExonRegion	0	503.06	352.43	27.45	7.61	1.14	29.00	19.98
117	ER49a	ExonRegion	0	428.92	266.54	19.50	4.99	2.73	21.19	19.75
118	E49a_E50a	KnownJunction	0	568.89	390.34	35.84	3.25	20.93	28.94	39.15
119	E50_Aa	NovelBoundary	1	133.50	1.26	6.71	0.00	0.99	0.00	0.59
120	ER50a	ExonRegion	0	203.88	132.86	14.12	0.85	2.08	10.85	16.65
121	ER51a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
122	IG27_AR3	ActiveIntergenicRegion	0	153.96	90.53	6.23	1.77	0.77	3.04	3.35
123	IG27_AR1	ActiveIntergenicRegion	0	9.73	4.47	0.76	0.25	0.05	0.12	0.14