Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MAP4K4	Gene	0	230.51	103.84	392.50	358.90	407.83	298.38	400.46
2	324219	Transcript	0	2.52	4.12	13.13	23.54	14.43	18.57	6.00
3	350198	Transcript	0	0	0	0	0	0	0	0
4	302217	Transcript	0	0.00	0.00	0.00	1.57	0.00	0.00	0.00
5	350878	Transcript	0	10.93	7.20	33.35	44.24	23.01	28.25	11.38
6	347699	Transcript	0	140.45	70.72	273.98	294.33	119.86	206.75	397.74
7	ER1a	ExonRegion	0	272.18	105.45	358.19	314.06	184.29	267.79	217.73
8	E1a_E2a	KnownJunction	0	362.92	159.07	566.78	522.24	117.78	383.29	336.47
9	ER2a	ExonRegion	0	485.35	174.06	675.61	574.42	270.86	483.01	413.00
10	E2a_E3a	KnownJunction	0	572.36	140.60	737.41	499.99	381.25	460.90	447.94
11	E2a_E4a	NovelJunction	0	12.77	6.80	12.88	8.15	3.14	14.31	6.15
12	ER3a	ExonRegion	0	607.00	181.42	898.07	632.54	471.05	482.89	607.99
13	E3a_E4a	KnownJunction	0	562.42	186.55	921.35	655.01	441.46	485.32	656.87
14	ER4a	ExonRegion	0	646.54	219.05	1009.38	725.32	552.24	553.56	688.21
15	E4a_E5a	KnownJunction	0	547.78	189.05	839.41	719.89	568.83	543.28	652.72
16	ER5a	ExonRegion	0	677.35	214.57	926.03	705.54	635.74	546.60	734.79
17	E5a_E6a	KnownJunction	0	780.32	260.77	983.20	793.39	631.26	614.55	755.57
18	ER6a	ExonRegion	0	660.08	307.63	994.31	822.50	727.90	581.11	829.83
19	E6a_E7a	KnownJunction	0	712.93	292.11	1003.31	816.07	765.03	619.26	868.37
20	E6a_E8a	NovelJunction	0	5.21	3.91	7.47	32.24	0.92	22.30	0.82
21	E6a_E11a	KnownJunction	0	0.00	0.00	0.00	1.57	0.00	0.00	0.00
22	ER7a	ExonRegion	0	562.56	249.68	776.23	661.82	533.49	457.21	756.25
23	E7a_E8a	KnownJunction	0	334.75	144.91	544.97	481.00	411.38	365.66	561.94
24	ER8a	ExonRegion	0	331.60	187.82	567.75	481.76	408.22	344.04	625.05
25	E8a_E9a	KnownJunction	0	283.91	214.74	521.01	462.58	428.60	300.32	583.85
26	E8a_E10a	NovelJunction	1	8.18	8.12	17.24	45.87	4.47	56.68	1.48
27	ER9a	ExonRegion	0	254.40	156.98	536.43	472.43	398.41	316.43	581.11
28	E9a_E10a	KnownJunction	0	208.57	133.04	513.78	384.72	294.66	283.38	479.17
29	ER10a	ExonRegion	0	284.87	206.84	620.04	551.99	354.48	406.68	629.94
30	E10a_E11a	KnownJunction	0	280.41	234.10	611.31	595.92	299.06	437.75	651.58
31	ER11a	ExonRegion	0	330.13	227.78	639.77	638.67	389.44	478.39	746.40
32	E11a_E12a	KnownJunction	0	319.09	217.90	568.09	679.28	518.14	470.58	778.02
33	ER12a	ExonRegion	0	349.26	229.46	654.86	737.15	431.22	523.68	789.42
34	E12a_E13a	KnownJunction	0	351.22	218.81	667.52	763.16	386.92	493.20	789.27
35	ER13a	ExonRegion	0	363.03	188.80	702.22	615.27	393.66	439.40	760.52
36	E13a_E14a	KnownJunction	0	327.07	118.90	555.43	361.91	389.39	311.73	719.61
37	E13a_E15a	NovelJunction	1	6.16	22.30	20.31	122.97	4.54	38.51	1.61
38	E13a_E15b	NovelJunction	1	30.98	2.63	60.08	37.11	0.85	10.13	1.59
39	E13a_E18a	NovelJunction	1	8.01	10.46	16.84	18.94	2.28	0.00	11.09
40	E14_Aa	NovelBoundary	1	128.31	0.00	190.85	4.20	0.92	4.02	2.85
41	ER14a	ExonRegion	0	228.79	108.40	424.43	372.93	327.51	280.54	629.48
42	E14a_E15a	KnownJunction	0	85.30	49.47	156.72	148.43	148.51	108.94	262.49
43	E14a_E15b	KnownJunction	0	80.06	50.49	191.11	202.29	178.24	144.69	280.55
44	ER15a	ExonRegion	0	87.39	64.63	166.19	224.35	160.98	150.13	270.56
45	E15_Ab	KnownBoundary	1	106.47	71.62	178.77	309.43	215.68	210.78	300.95
46	ER15b	ExonRegion	0	144.45	125.75	282.11	465.80	283.26	322.09	444.06
47	E15a_E16a	KnownJunction	1	48.17	28.64	69.97	117.95	69.64	45.35	139.00
48	E15a_E17a	KnownJunction	0	10.93	7.20	33.35	44.24	23.01	28.25	11.38
49	E15a_E18a	KnownJunction	0	108.60	97.57	217.29	278.96	164.14	221.61	284.61
50	ER16a	ExonRegion	0	55.91	28.22	106.91	124.72	76.62	69.21	159.92
51	E16a_E17a	KnownJunction	0	2.52	4.12	13.13	23.54	14.43	18.57	6.00
52	E16a_E18a	KnownJunction	0	46.01	20.10	90.71	91.49	61.87	51.54	132.54
53	ER17a	ExonRegion	1	16.98	9.64	57.83	82.62	40.85	47.60	16.98
54	E17a_E18a	KnownJunction	1	13.08	9.72	59.97	94.11	34.83	48.78	17.94
55	ER18a	ExonRegion	0	184.97	117.43	331.56	443.69	181.18	337.79	330.71
56	E18a_E19a	KnownJunction	0	152.41	70.85	327.17	328.05	215.52	266.20	324.81
57	E18a_E19b	KnownJunction	0	61.34	18.39	96.14	116.95	57.86	80.18	115.77
58	E19_Ab	NovelBoundary	1	71.37	0.00	146.29	1.14	0.00	0.00	0.00
59	ER19a	ExonRegion	0	160.99	77.14	337.51	358.50	209.55	276.16	323.30
60	ER19b	ExonRegion	0	159.42	125.19	344.55	455.12	226.91	327.59	388.66
61	E19a_E20a	KnownJunction	0	196.96	124.40	407.76	489.78	296.94	376.62	509.07
62	ER20a	ExonRegion	0	266.15	159.84	501.80	573.65	315.53	426.23	604.57
63	E20a_E21a	KnownJunction	0	234.88	121.35	457.26	497.18	177.85	361.96	662.94
64	E20b_E21a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
65	ER20b	ExonRegion	0	7.34	0.40	7.90	8.87	5.67	1.09	3.82
66	ER21a	ExonRegion	0	262.62	176.18	445.06	646.88	423.38	493.39	680.59
67	E21_Da	NovelBoundary	1	206.64	3.89	272.13	16.31	6.22	15.62	20.64
68	E21a_E22a	KnownJunction	0	414.83	169.16	627.81	614.67	505.50	495.45	867.93
69	ER22a	ExonRegion	0	380.91	189.88	599.81	666.57	691.64	533.71	884.70
70	E22a_E23a	KnownJunction	0	317.46	120.35	312.47	269.69	684.67	289.97	545.48
71	I22_SR1	SilentIntronRegion	0	82.79	14.29	70.26	15.67	18.69	7.53	26.28
72	ER23a	ExonRegion	0	657.57	187.61	766.11	559.48	906.92	515.78	760.94
73	E23a_E24a	KnownJunction	0	424.34	192.94	618.10	612.96	632.87	570.25	646.10
74	ER24a	ExonRegion	0	450.88	152.89	640.09	512.96	702.22	441.42	694.22
75	E24a_E25a	KnownJunction	0	277.84	132.17	504.01	393.53	566.75	344.03	671.54
76	E25_Aa	NovelBoundary	0	36.62	22.23	38.01	84.96	4.22	86.32	4.44
77	ER25a	ExonRegion	0	296.20	160.53	577.85	482.13	558.53	422.93	706.66
78	E25a_E26a	KnownJunction	0	312.22	167.82	638.06	456.84	591.61	368.18	634.98
79	ER26a	ExonRegion	0	338.41	146.66	677.81	424.17	584.95	407.30	684.59
80	E26a_E27a	KnownJunction	0	369.11	124.84	724.06	355.52	668.23	354.35	595.18
81	ER27a	ExonRegion	0	449.44	141.46	830.04	437.97	796.09	444.16	801.57
82	E27a_E28a	KnownJunction	0	494.94	139.61	821.25	512.92	744.19	473.42	870.05
83	ER28a	ExonRegion	0	462.17	168.32	763.65	600.69	750.52	551.63	870.73
84	E28_Da	NovelBoundary	0	102.29	26.64	150.16	94.58	51.55	59.55	166.20
85	E28a_E29a	KnownJunction	0	400.14	155.66	632.81	561.38	989.17	522.65	820.70
86	E28b_E29a	KnownJunction	1	73.25	24.80	163.65	105.22	83.89	78.04	273.97
87	ER28b	ExonRegion	0	90.71	28.90	169.09	110.72	73.09	79.03	248.53
88	ER29a	ExonRegion	0	469.71	167.58	694.19	626.12	937.96	594.62	890.38
89	E29a_E30a	KnownJunction	0	386.89	165.75	589.59	614.75	795.02	583.35	708.49
90	E29a_E31a	NovelJunction	0	3.74	6.75	2.01	18.64	2.31	21.57	4.10
91	ER30a	ExonRegion	0	523.27	170.95	686.94	645.29	858.96	640.96	807.42
92	E30a_E31a	KnownJunction	0	477.20	162.57	598.97	585.33	877.28	651.29	660.94
93	ER31a	ExonRegion	0	102.63	43.92	200.27	185.77	344.48	176.02	172.75
94	IG48_AR1	ActiveIntergenicRegion	0	12.56	5.20	19.42	10.03	2.43	5.02	9.35
95	IG48_SR1	SilentIntergenicRegion	0	13.33	3.10	21.20	5.55	1.62	8.58	13.96
96	IG48_AR2	ActiveIntergenicRegion	0	10.79	3.42	16.95	6.37	1.09	2.18	9.22