Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	VIT	Gene	0	0.14	0.16	7.84	1.89	0.14	9.74	0.02
2	402257	Transcript	0	0.00	0.00	1.14	0.28	0.20	1.77	0.00
3	379242	Transcript	0	0.00	0.00	3.87	1.25	0.00	4.61	0.00
4	389975	Transcript	0	0.00	0.00	0.00	0.00	0.00	1.53	0.00
5	379241	Transcript	0	0.00	0.00	0.89	0.00	0.00	1.23	0.00
6	404084	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	401530	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	ER1a	ExonRegion	0	0.00	0.00	0.08	0.00	0.00	2.76	0.00
9	ER1b	ExonRegion	0	0.00	0.00	3.67	0.00	0.00	6.69	0.00
10	E1_Ac	KnownBoundary	0	0.00	0.00	6.83	0.00	0.00	9.38	0.00
11	ER1c	ExonRegion	0	0.00	0.00	8.29	0.81	0.00	10.34	0.03
12	E1_Ad	KnownBoundary	0	0.00	0.00	8.09	1.68	0.00	8.74	0.00
13	ER1d	ExonRegion	0	0.00	0.00	15.93	2.07	0.00	6.00	0.52
14	E1a_E2a	KnownJunction	0	0.00	0.00	15.46	1.68	0.00	16.72	0.00
15	ER2a	ExonRegion	0	0.00	0.00	16.88	1.50	0.00	13.99	0.00
16	E2a_E3a	KnownJunction	0	0.00	0.00	13.44	2.84	0.00	9.89	0.00
17	E2a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER3a	ExonRegion	0	0.00	0.00	13.33	4.61	0.00	11.48	0.00
19	E3a_E4a	KnownJunction	0	0.00	0.00	12.73	6.72	0.00	17.29	0.00
20	ER4a	ExonRegion	0	0.00	0.00	15.99	5.36	0.26	17.40	0.00
21	E4a_E5a	KnownJunction	0	0.00	0.00	19.04	1.14	0.00	23.40	0.00
22	ER5a	ExonRegion	0	0.00	0.00	19.22	3.49	0.31	22.05	0.00
23	E5a_E6a	KnownJunction	0	0.00	0.00	21.37	4.25	0.00	12.44	0.00
24	ER6a	ExonRegion	0	0.00	0.00	17.47	7.69	0.21	21.85	0.00
25	E6_Da	KnownBoundary	0	0.00	0.00	2.24	1.52	0.00	4.34	0.00
26	E6a_E7a	KnownJunction	0	0.00	0.00	12.55	5.23	1.18	21.87	0.00
27	ER6b	ExonRegion	0	0.00	0.00	2.20	0.55	0.39	0.79	0.00
28	ER7a	ExonRegion	0	0.30	0.48	10.19	2.91	0.13	12.52	0.00
29	E7a_E8a	KnownJunction	0	0.00	0.00	4.12	2.76	0.00	2.92	0.00
30	E7a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	ER8a	ExonRegion	0	0.00	0.00	3.74	0.74	0.00	3.89	0.00
32	E8a_E9a	KnownJunction	0	0.00	0.00	1.28	0.00	0.00	7.08	0.00
33	E8a_E11a	KnownJunction	0	0.00	0.00	0.89	0.00	0.00	1.23	0.00
34	ER9a	ExonRegion	0	0.00	0.00	2.95	0.00	0.00	7.62	0.00
35	E9a_E10a	KnownJunction	0	0.00	0.00	3.87	1.25	0.00	4.61	0.00
36	E9a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.53	0.00
37	E9a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	ER10a	ExonRegion	0	0.00	0.00	5.86	0.00	0.00	5.23	0.00
39	E10a_E11a	KnownJunction	0	0.00	0.00	8.39	0.00	0.00	4.48	0.00
40	ER11a	ExonRegion	0	0.00	0.00	15.31	0.00	0.00	11.29	0.00
41	E11a_E12a	KnownJunction	0	0.00	0.00	16.50	0.00	0.00	17.96	0.00
42	ER12a	ExonRegion	0	0.01	0.00	12.44	1.56	0.00	13.04	0.00
43	E12a_E13a	KnownJunction	0	0.00	0.00	17.43	2.71	0.00	22.19	0.00
44	ER13a	ExonRegion	0	1.61	0.00	13.16	1.68	0.00	12.90	0.00
45	E13a_E14a	KnownJunction	0	0.00	0.00	9.33	2.63	0.00	10.80	0.00
46	ER14a	ExonRegion	0	0.51	0.41	7.64	0.69	0.00	14.70	0.00
47	E14a_E15a	KnownJunction	0	0.00	0.00	7.57	1.00	0.00	6.89	0.00
48	ER15a	ExonRegion	0	0.00	0.36	5.25	1.80	0.00	10.38	0.00
49	E15a_E16a	KnownJunction	0	0.00	0.00	6.15	3.01	0.00	10.40	0.00
50	ER16a	ExonRegion	0	0.11	0.30	6.42	4.22	0.16	13.07	0.00
51	E16_Da	KnownBoundary	0	1.03	1.16	9.38	0.00	0.00	13.16	0.00
52	ER16b	ExonRegion	0	0.29	0.35	4.77	0.94	0.13	7.24	0.00
53	E16_Db	KnownBoundary	0	0.00	0.00	1.48	0.00	0.00	3.24	0.00
54	ER16c	ExonRegion	0	0.00	0.00	0.31	0.00	0.00	2.40	0.00
55	IG8_AR2	ActiveIntergenicRegion	0	40.01	8.97	9.51	3.95	5.64	4.10	15.53
56	IG8_SR2	SilentIntergenicRegion	0	33.89	5.83	10.14	2.03	6.14	2.08	9.18
57	IG8_AR3	ActiveIntergenicRegion	0	40.98	8.83	13.49	3.31	4.82	3.30	16.93
58	IG8_SR3	SilentIntergenicRegion	0	73.24	16.12	25.02	0.00	8.55	3.95	25.80
59	IG8_AR4	ActiveIntergenicRegion	0	48.44	15.47	17.11	4.05	6.17	3.30	17.97
60	IG8_SR4	SilentIntergenicRegion	0	26.95	8.85	12.16	2.97	2.26	1.85	13.61
61	IG8_AR5	ActiveIntergenicRegion	0	104.79	58.72	35.96	16.09	89.88	16.20	43.06
62	IG8_SR5	SilentIntergenicRegion	0	20.49	8.28	7.15	1.29	10.47	1.82	11.32
63	IG8_AR8	ActiveIntergenicRegion	0	257.30	120.72	66.56	24.86	121.40	32.44	65.61
64	IG8_AR9	ActiveIntergenicRegion	0	458.04	112.11	92.51	27.70	201.65	29.34	56.18
65	IG8_AR10	ActiveIntergenicRegion	0	288.31	137.85	108.32	24.04	110.45	33.91	96.92