Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MCFD2	Gene	0	263.45	359.31	347.12	512.15	212.80	506.79	251.68
2	409147	Transcript	0	0.47	2.64	0.45	2.44	0.30	1.06	0.00
3	409207	Transcript	0	0.00	4.54	0.00	2.79	0.00	0.00	3.65
4	409218	Transcript	0	0.76	2.12	2.75	6.88	3.76	1.87	0.49
5	409800	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	409913	Transcript	0	13.53	17.45	15.19	48.34	17.55	46.51	12.63
7	409973	Transcript	0	12.49	13.24	7.73	7.74	31.90	7.11	14.98
8	319466	Transcript	0	208.67	419.45	244.80	629.79	83.64	436.06	303.24
9	409105	Transcript	0	1.47	1.40	0.53	0.53	0.35	0.97	0.74
10	ER1a	ExonRegion	0	0.95	5.28	0.91	4.88	0.60	2.13	0.00
11	E1_Ab	KnownBoundary	0	0.00	5.54	1.52	6.15	0.00	1.07	0.00
12	ER1b	ExonRegion	0	1.09	5.36	2.94	2.55	2.63	0.08	2.91
13	E1_Da	NovelBoundary	1	28.14	136.74	36.74	38.60	17.96	55.31	38.19
14	E1a_E6a	KnownJunction	0	0.00	4.54	0.00	2.79	0.00	0.00	3.65
15	E1a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	ER2a	ExonRegion	0	0.73	2.80	2.74	5.98	3.79	2.08	0.11
17	E2_Ab	KnownBoundary	0	2.30	6.44	5.81	15.20	2.03	3.00	1.13
18	ER2b	ExonRegion	0	0.72	4.53	3.75	13.10	4.94	1.43	1.19
19	E2a_E6a	KnownJunction	0	0.78	1.44	2.76	7.78	3.73	1.66	0.86
20	E2a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER3a	ExonRegion	0	2.96	3.30	4.74	2.14	1.97	0.00	7.32
22	E3_Ac	KnownBoundary	1	74.59	134.61	113.80	180.75	76.12	87.58	121.67
23	ER3b	ExonRegion	0	42.47	69.45	62.70	90.86	39.22	45.73	63.68
24	ER3c	ExonRegion	0	219.92	371.06	292.58	576.67	238.18	366.08	298.13
25	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	E3a_E5a	KnownJunction	1	6.91	13.82	3.16	13.06	2.05	9.14	15.28
27	E3a_E6a	KnownJunction	0	208.67	419.45	244.80	629.79	83.64	436.06	303.24
28	E3a_E7a	KnownJunction	1	24.10	31.60	25.64	94.55	33.13	93.02	17.94
29	ER4a	ExonRegion	0	3.70	3.05	1.60	1.59	1.06	1.25	2.21
30	E4a_E6a	KnownJunction	0	0.72	1.16	0.00	0.00	0.00	1.66	0.00
31	ER5a	ExonRegion	0	29.51	13.62	17.39	6.86	93.65	7.41	17.19
32	E5_Da	NovelBoundary	0	1074.58	610.44	687.05	479.30	391.07	469.05	454.36
33	E5a_E6a	KnownJunction	0	1.03	12.27	2.63	3.31	0.00	4.77	12.48
34	ER6a	ExonRegion	0	136.11	421.30	190.64	526.48	87.39	399.95	251.10
35	E6a_E7a	KnownJunction	0	340.57	556.48	460.58	759.93	187.67	643.89	495.38
36	E6a_E8a	NovelJunction	0	7.53	57.38	18.49	126.84	2.07	71.31	7.29
37	ER7a	ExonRegion	0	347.35	748.39	447.51	909.71	377.96	826.97	520.75
38	E7a_E8a	KnownJunction	0	341.14	818.28	509.26	1043.98	343.21	979.29	604.61
39	ER8a	ExonRegion	0	606.82	925.43	755.67	1127.64	495.15	1084.12	667.72
40	E8_Da	KnownBoundary	0	478.72	765.10	640.85	895.96	450.66	886.94	465.83
41	E8_Db	KnownBoundary	0	628.71	724.86	744.35	973.33	446.33	859.79	439.19
42	ER8b	ExonRegion	0	776.71	1062.30	997.32	1296.51	526.78	1219.02	655.21
43	ER8c	ExonRegion	0	632.17	912.51	861.10	1196.93	448.67	1094.03	567.97
44	E8_Dc	KnownBoundary	0	474.75	782.73	753.18	1056.80	416.33	930.68	517.82
45	ER8d	ExonRegion	0	321.95	478.62	487.15	632.61	243.27	566.46	339.48
46	E8_Dd	KnownBoundary	0	158.27	180.01	195.93	235.88	144.20	161.90	144.55
47	ER8e	ExonRegion	0	277.46	339.27	361.83	517.95	220.88	538.72	240.49
48	ER8f	ExonRegion	0	16.33	8.20	19.98	20.26	15.99	30.96	17.71
49	IG37_AR18	ActiveIntergenicRegion	0	5.52	12.40	11.47	14.82	1.51	40.77	2.22