Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	NRXN1	Gene	0	0.02	0.02	0.15	0.00	20.98	0.02	0.00
2	405581	Transcript	0	0.04	0.00	0.02	0.00	2.26	0.00	0.00
3	405472	Transcript	0	0	0	0	0	0	0	0
4	406316	Transcript	0	0	0	0	0	0	0	0
5	404971	Transcript	0	0.00	0.00	0.00	0.00	0.58	0.00	0.00
6	401669	Transcript	0	0	0	0	0	0	0	0
7	402717	Transcript	0	0	0	0	0	0	0	0
8	378262	Transcript	0	0	0	0	0	0	0	0
9	406859	Transcript	0	0.00	0.00	0.00	0.00	0.01	0.00	0.00
10	331040	Transcript	0	0.00	0.00	0.00	0.00	2.25	0.00	0.00
11	401710	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	342183	Transcript	0	0.00	0.00	0.00	0.00	1.70	0.00	0.00
13	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	3.07	0.00	0.00
14	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	4.40	0.00	0.00
15	ER1b	ExonRegion	0	0.00	0.00	0.00	0.00	1.57	0.00	0.00
16	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	1.98	0.00
17	ER1c	ExonRegion	0	0.00	0.00	0.00	0.00	13.53	0.00	0.00
18	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	10.42	0.00	0.00
19	ER2a	ExonRegion	0	0.00	0.00	0.07	0.00	38.92	0.00	0.00
20	E2_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	1.11	0.00	0.00
21	ER2b	ExonRegion	0	0.00	0.00	0.13	0.00	9.44	0.00	0.00
22	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	E2a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	E2a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	2.17	0.00	0.00
25	E2a_E13b	NovelJunction	0	0.00	0.00	0.00	0.00	18.67	0.00	0.00
26	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	1.67	0.00	0.00
27	E3a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	E4a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	1.66	0.00	0.00
31	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	E7a_E8b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	E7a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.81	0.00	0.00
36	ER7b	ExonRegion	0	0.00	0.00	0.00	0.00	1.20	0.00	0.00
37	E8a_E13b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	E8b_E13b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	ER8a	ExonRegion	0	0.00	0.00	0.00	0.00	0.81	0.00	0.00
40	ER8b	ExonRegion	0	0.00	0.00	0.00	0.00	2.02	0.00	0.00
41	ER8c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	ER9a	ExonRegion	0	0.04	0.00	0.02	0.00	2.26	0.00	0.00
43	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	ER10a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
45	E11a_E13b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	ER11a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
47	ER12a	ExonRegion	0	0.00	0.00	0.00	0.00	0.01	0.00	0.00
48	E12a_E13b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
49	ER13a	ExonRegion	0	0.00	0.00	0.00	0.00	2.02	0.00	0.00
50	ER13b	ExonRegion	0	0.00	0.00	0.56	0.00	36.16	0.00	0.00
51	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	4.59	0.00	0.00
52	E13a_E15a	KnownJunction	0	0.00	0.00	0.72	0.00	35.32	0.00	0.00
53	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	1.15	0.00	0.00
54	ER14a	ExonRegion	0	0.00	0.00	0.00	0.00	4.25	0.00	0.00
55	E14b_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.90	0.00	0.00
56	ER14b	ExonRegion	0	0.00	0.00	0.00	0.00	0.93	0.00	0.00
57	ER15a	ExonRegion	0	0.00	0.00	0.24	0.00	29.91	0.00	0.00
58	E15a_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	30.78	0.00	0.00
59	I15_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	16.52	0.00	0.00
60	ER16a	ExonRegion	0	0.00	0.00	0.00	0.00	30.02	0.00	0.00
61	E16a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	21.60	0.00	0.00
62	ER17a	ExonRegion	0	0.00	0.00	0.00	0.00	28.15	0.00	0.00
63	E17a_E18a	KnownJunction	0	0.00	0.00	0.00	0.00	28.84	0.00	0.00
64	ER18a	ExonRegion	0	0.00	0.00	0.00	0.00	35.31	0.00	0.00
65	E18a_E19a	KnownJunction	0	0.00	0.00	0.00	0.00	11.69	0.00	0.00
66	E18a_E20a	NovelJunction	0	0.00	0.00	0.00	0.00	26.99	0.00	0.00
67	E19a_E20a	KnownJunction	0	0.00	0.00	0.00	0.00	12.33	0.00	0.00
68	ER19a	ExonRegion	0	0.00	0.00	0.00	0.00	14.52	0.00	0.00
69	ER20a	ExonRegion	0	0.00	0.00	0.00	0.00	24.58	0.00	0.00
70	E20a_E21a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
71	E20b_E21b	KnownJunction	0	0.00	0.00	0.00	0.00	36.61	0.00	0.00
72	ER20b	ExonRegion	0	0.00	0.00	0.00	0.00	37.58	0.00	0.00
73	ER21a	ExonRegion	0	0.00	0.00	0.00	0.00	12.69	0.00	0.00
74	ER21b	ExonRegion	0	0.00	0.00	0.48	0.00	42.86	0.00	0.00
75	E21a_E22a	KnownJunction	0	0.00	0.00	1.81	0.00	50.00	0.00	0.00
76	E22_Ab	NovelBoundary	0	0.00	0.00	0.00	0.00	35.04	0.00	0.00
77	ER22a	ExonRegion	0	0.00	0.00	1.12	0.00	48.79	0.00	0.00
78	ER22b	ExonRegion	0	0.00	0.00	1.20	0.00	59.02	0.49	0.00
79	E22a_E23a	KnownJunction	0	0.00	0.00	0.00	0.00	46.87	1.05	0.00
80	ER23a	ExonRegion	0	0.27	0.40	0.20	0.00	48.01	0.59	0.00
81	E23a_E24a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
82	E23a_E25a	KnownJunction	0	0.77	1.31	0.79	0.00	35.57	0.00	0.00
83	E24a_E25a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
84	ER24a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
85	ER25a	ExonRegion	0	0.21	0.63	0.17	0.00	37.75	0.00	0.00
86	E25b_E27a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
87	E25b_E28a	KnownJunction	0	0.82	1.63	0.55	0.00	36.17	0.00	0.00
88	ER25b	ExonRegion	0	0.77	1.21	0.68	0.00	41.30	0.00	0.00
89	ER26a	ExonRegion	0	0.00	0.00	0.00	0.00	1.40	0.00	0.00
90	E26a_E28a	KnownJunction	0	0.00	0.00	0.00	0.00	2.01	0.00	0.00
91	E27a_E28b	KnownJunction	0	0.00	0.00	0.00	0.00	1.04	0.00	0.00
92	ER27a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
93	E28_Ab	NovelBoundary	0	0.88	0.00	0.76	0.00	43.62	0.00	0.00
94	ER28a	ExonRegion	0	0.77	1.21	0.68	0.00	42.18	0.00	0.00
95	ER28b	ExonRegion	0	0.17	0.07	0.27	0.00	49.17	0.00	0.00
96	E28a_E29a	KnownJunction	0	0.00	0.00	0.70	0.00	36.65	0.00	0.00
97	ER29a	ExonRegion	0	0.00	0.00	0.33	0.00	46.23	0.00	0.00
98	E29a_E30a	KnownJunction	0	0.00	0.00	0.80	0.00	43.89	0.00	0.00
99	E29a_E31a	KnownJunction	0	0.00	0.00	0.00	0.00	1.18	0.00	0.00
100	ER30a	ExonRegion	0	0.00	0.00	0.84	0.00	36.17	0.00	0.00
101	E30a_E31a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
102	ER31a	ExonRegion	0	0.00	0.00	0.20	0.00	33.15	0.00	0.00
103	E31a_E32a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
104	E31b_E32a	KnownJunction	0	0.00	0.00	0.00	0.00	23.91	0.00	0.00
105	ER31b	ExonRegion	0	0.00	0.00	0.00	0.00	28.07	0.00	0.00
106	ER32a	ExonRegion	0	0.00	0.00	0.00	0.00	27.41	0.00	0.00
107	E32a_E33a	KnownJunction	0	0.00	0.00	0.00	0.00	9.24	0.00	0.00
108	ER33a	ExonRegion	0	0.00	0.00	0.00	0.00	31.80	0.00	0.00
109	E33_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	30.45	0.00	0.00
110	ER33b	ExonRegion	0	0.00	0.00	0.50	0.00	40.70	0.00	0.00
111	E33_Db	KnownBoundary	0	0.00	0.00	0.79	0.00	11.94	0.00	0.00
112	ER33c	ExonRegion	0	0.00	0.00	0.37	0.00	40.34	0.00	0.00
113	IG8_AR1	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	21.71	0.00	0.00