Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	FEZ2	Gene	0	126.76	124.69	101.07	67.12	66.33	45.66	189.45
2	379245	Transcript	0	10.36	15.86	4.93	5.46	12.15	1.58	22.43
3	357996	Transcript	0	0	0	0	0	0	0	0
4	305852	Transcript	0	0.38	0.09	2.73	0.00	0.00	0.00	0.00
5	405912	Transcript	0	138.19	114.66	112.95	66.39	72.95	50.83	189.57
6	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.04	0.00	0.00
7	E1_Ac	KnownBoundary	0	0.00	1.21	0.00	0.00	1.18	0.00	1.48
8	ER1b	ExonRegion	0	0.00	0.75	0.00	0.00	0.81	0.00	0.65
9	ER1c	ExonRegion	0	13.55	34.89	9.56	19.01	8.98	7.94	27.33
10	E1a_E2a	KnownJunction	0	65.91	93.18	53.18	52.53	33.91	30.34	129.74
11	E1a_E3a	NovelJunction	1	1.03	11.72	0.59	0.00	0.00	1.50	1.52
12	ER2a	ExonRegion	0	82.96	212.04	80.73	98.48	55.61	59.55	241.65
13	E2_Da	NovelBoundary	0	47.92	95.79	40.32	43.10	15.28	31.73	127.26
14	E2a_E3a	KnownJunction	0	93.96	227.17	91.19	101.46	47.90	69.73	283.20
15	ER3a	ExonRegion	1	94.66	280.26	108.09	106.29	67.74	73.62	304.82
16	E3a_E4a	KnownJunction	1	104.58	248.03	120.06	107.36	68.70	71.18	367.47
17	ER4a	ExonRegion	0	107.87	192.88	115.03	89.13	84.40	62.34	320.02
18	E4a_E5a	KnownJunction	0	97.50	125.31	118.77	61.31	71.42	67.86	248.99
19	ER5a	ExonRegion	0	275.54	196.23	185.05	102.40	131.73	71.60	310.57
20	E5a_E6a	KnownJunction	1	16.31	21.33	6.44	3.82	12.77	2.84	25.94
21	E5a_E7a	KnownJunction	0	159.72	87.43	121.13	54.18	85.30	36.45	175.50
22	E5a_E8a	NovelJunction	0	19.43	12.58	16.44	12.16	0.85	4.61	3.38
23	I5_AR4	ActiveIntronRegion	1	8.87	10.51	15.41	27.84	2.35	6.93	7.58
24	I5_SR5	SilentIntronRegion	1	6.52	6.53	15.65	23.84	0.89	7.74	6.29
25	I5_SR6	SilentIntronRegion	1	8.44	8.62	15.55	14.36	1.18	3.04	6.33
26	ER6a	ExonRegion	0	9.68	15.31	6.93	7.91	11.75	1.91	21.03
27	E6a_E7a	KnownJunction	1	5.09	10.93	1.42	4.66	11.94	0.00	20.32
28	I6_SR2	SilentIntronRegion	0	12.90	8.93	14.69	15.02	2.39	5.00	5.11
29	I6_AR1	ActiveIntronRegion	1	15.26	9.72	16.84	21.38	1.39	8.58	6.94
30	I6_SR3	SilentIntronRegion	1	21.10	8.71	27.68	25.59	3.79	5.46	5.77
31	ER7a	ExonRegion	0	174.56	109.94	113.00	51.14	71.01	44.49	195.11
32	E7a_E8a	KnownJunction	0	146.75	132.49	99.23	45.05	81.22	49.66	177.02
33	I7_SR1	SilentIntronRegion	1	10.48	5.83	20.68	10.22	1.81	3.75	3.50
34	ER8a	ExonRegion	0	145.09	127.34	118.06	63.67	69.55	52.07	192.12
35	E8a_E10a	KnownJunction	0	130.03	117.85	107.04	60.60	72.92	52.37	186.41
36	ER8b	ExonRegion	0	0.77	0.17	5.45	0.00	0.00	0.00	0.00
37	ER9a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	I9_SR1	SilentIntronRegion	1	5.25	10.49	14.94	16.37	1.07	4.93	3.93
39	E10_Aa	NovelBoundary	1	9.63	13.37	27.75	8.97	0.88	1.66	6.08
40	ER10a	ExonRegion	0	146.34	111.47	118.85	72.18	72.99	49.29	192.73
41	E10_Da	NovelBoundary	0	27.69	24.30	27.94	38.36	18.72	21.33	55.96
42	ER11a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00