Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 ANTXR1 Gene 0 35.12 9.87 250.91 47.55 140.81 117.45 67.56 2 409829 Transcript 1 2.29 0.41 7.55 8.30 24.92 13.33 18.92 3 394317 Transcript 0 0.00 0.00 0.02 0.00 0.00 0.00 0.00 4 308181 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 303714 Transcript 0 28.55 13.18 203.43 56.36 110.23 120.03 62.25 6 409608 Transcript 0 1.68 0.00 19.38 3.13 6.94 6.42 3.47 7 409349 Transcript 0 0.00 0.00 0.29 0.01 0.71 0.01 0.02 8 ER1a ExonRegion 0 0.56 0.37 4.68 2.42 3.50 13.63 0.64 9 E1_Ab KnownBoundary 0 1.03 1.23 6.24 3.03 4.22 17.80 0.89 10 E1_Ac KnownBoundary 0 0.97 1.55 5.17 4.77 2.35 11.44 0.00 11 ER1b ExonRegion 0 0.83 1.21 13.18 4.80 11.15 23.77 2.65 12 E1_Ad KnownBoundary 1 12.80 4.94 98.31 20.10 152.98 29.35 37.61 13 ER1c ExonRegion 0 7.49 4.72 57.13 16.12 86.47 31.92 19.46 14 ER1d ExonRegion 0 8.93 6.03 76.82 29.78 56.10 64.23 36.11 15 E1a_E2a KnownJunction 0 17.79 5.54 129.95 49.74 164.67 104.79 65.34 16 ER2a ExonRegion 0 20.50 7.71 154.45 69.41 108.39 136.61 68.83 17 E2a_E3a KnownJunction 0 16.82 6.80 175.38 65.21 79.14 138.47 60.55 18 ER3a ExonRegion 1 15.68 8.76 193.20 71.86 70.56 152.07 67.48 19 E3a_E4a KnownJunction 0 23.27 16.50 227.24 73.61 80.85 164.18 81.47 20 ER4a ExonRegion 0 28.80 15.97 268.95 65.68 126.51 154.51 100.74 21 E4a_E5a KnownJunction 1 16.97 15.89 233.30 55.59 143.57 111.25 85.44 22 ER5a ExonRegion 1 26.04 21.55 293.65 60.73 151.73 153.00 105.57 23 E5a_E6a KnownJunction 0 22.51 20.81 214.61 52.10 146.82 119.55 77.50 24 ER6a ExonRegion 0 31.44 19.74 288.52 75.77 158.06 148.50 111.83 25 E6a_E7a KnownJunction 0 46.45 8.35 327.37 69.76 191.66 150.13 115.75 26 ER7a ExonRegion 0 54.82 18.22 414.53 83.80 280.67 144.67 172.11 27 E7a_E8a KnownJunction 0 71.45 24.01 470.71 84.47 219.58 141.02 206.16 28 ER8a ExonRegion 0 81.86 30.81 482.47 128.70 273.94 196.69 203.51 29 E8a_E9a KnownJunction 0 92.96 34.21 480.20 131.15 236.29 218.07 166.29 30 ER9a ExonRegion 0 90.85 32.62 538.82 129.36 310.45 213.79 203.70 31 E9a_E10a KnownJunction 0 94.83 32.16 606.34 140.95 417.39 234.36 275.74 32 ER10a ExonRegion 0 84.06 22.90 496.30 113.41 365.43 174.02 211.52 33 E10a_E11a KnownJunction 0 58.65 15.53 382.78 92.16 292.36 151.04 142.12 34 ER11a ExonRegion 0 50.50 18.07 360.43 88.02 220.12 162.62 137.44 35 E11a_E12a KnownJunction 0 49.32 21.07 349.47 89.24 172.50 168.68 152.50 36 ER12a ExonRegion 0 46.60 24.22 342.54 86.43 247.57 176.89 161.38 37 E12_Da NovelBoundary 1 13.80 0.00 109.01 1.00 3.48 0.99 3.71 38 E12a_E23b KnownJunction 0 1.82 0.00 20.46 5.01 10.24 7.93 4.24 39 E12b_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 E12b_E14a KnownJunction 1 3.52 0.00 6.87 10.40 45.21 9.30 27.67 41 E12b_E15a KnownJunction 1 27.69 20.86 260.25 67.21 123.84 111.35 73.98 42 ER12b ExonRegion 0 29.82 19.92 272.71 81.55 173.47 131.67 111.17 43 ER13a ExonRegion 0 0.00 0.00 0.04 0.00 0.00 0.00 0.00 44 ER14a ExonRegion 1 2.78 0.86 11.11 12.07 26.04 17.08 28.46 45 ER15a ExonRegion 0 23.45 15.81 216.74 62.58 126.89 113.84 75.00 46 E15a_E16a KnownJunction 1 14.19 15.00 161.44 58.87 117.87 119.61 60.77 47 ER16a ExonRegion 0 22.39 16.86 192.33 52.70 109.56 117.67 62.66 48 E16a_E19a KnownJunction 0 0.00 0.00 0.00 0.00 0.97 0.00 0.00 49 E16a_E20a KnownJunction 0 22.41 14.55 176.19 40.72 108.53 89.19 54.66 50 ER17a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51 ER18a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 52 ER19a ExonRegion 0 0.00 0.01 0.59 0.01 0.45 0.01 0.03 53 ER20a ExonRegion 0 26.75 11.45 202.60 59.10 93.50 98.23 53.55 54 E20a_E21a KnownJunction 0 25.30 16.81 177.55 65.21 143.53 99.72 42.94 55 ER21a ExonRegion 0 35.86 15.19 258.49 71.28 145.23 136.20 84.80 56 E21a_E22a KnownJunction 0 34.30 13.29 200.34 52.26 74.23 165.57 78.35 57 ER22a ExonRegion 0 22.72 10.32 153.04 53.23 77.89 117.03 61.68 58 E22a_E23a KnownJunction 1 9.68 11.95 101.61 53.45 53.64 98.81 47.15 59 ER23a ExonRegion 0 51.39 11.89 357.64 55.62 185.32 155.45 74.90 60 E23_Ab KnownBoundary 1 63.10 9.90 412.54 46.62 204.48 169.96 44.18 61 ER23b ExonRegion 0 31.47 7.64 256.09 40.62 151.56 126.06 56.16 62 ER23c ExonRegion 0 1.54 0.00 18.29 1.25 3.64 4.90 2.70 63 IG36_AR4 ActiveIntergenicRegion 0 10.43 1.21 6.87 7.30 5.67 4.90 6.46 64 IG36_SR4 SilentIntergenicRegion 0 9.09 1.61 5.17 4.39 2.48 3.60 7.81 65 IG36_AR5 ActiveIntergenicRegion 0 69.32 82.50 39.85 81.44 177.57 169.09 106.47 66 IG36_AR6 ActiveIntergenicRegion 0 115.25 107.40 71.97 70.46 239.06 152.52 193.21