Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	C2orf63	Gene	0	11.67	4.01	7.12	3.25	9.83	1.66	5.71
2	406076	Transcript	0	0.38	0.00	2.24	0.00	5.06	1.17	1.34
3	406437	Transcript	0	15.34	4.43	7.52	3.54	10.30	1.25	2.49
4	295110	Transcript	0	2.38	0.83	0.87	0.00	3.30	0.00	0.17
5	401408	Transcript	0	0	0	0	0	0	0	0
6	402516	Transcript	0	0	0	0	0	0	0	0
7	407122	Transcript	0	0.32	1.88	0.82	1.22	0.67	0.00	0.33
8	403506	Transcript	0	0.98	0.67	0.50	0.46	1.67	0.45	1.10
9	ER1a	ExonRegion	0	0.77	0.00	4.48	0.00	10.11	2.35	2.67
10	E1_Da	NovelBoundary	0	23.43	6.20	18.74	12.49	24.69	9.33	18.30
11	E1a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	ER2a	ExonRegion	0	1.47	0.00	1.06	0.27	0.00	1.03	0.94
13	E2_Ab	KnownBoundary	0	4.36	0.00	3.97	1.14	0.00	1.66	4.01
14	ER2b	ExonRegion	0	3.04	0.00	2.40	1.25	0.00	1.23	6.07
15	ER2c	ExonRegion	0	11.04	2.56	5.60	3.28	5.20	0.82	7.72
16	E2b_E6a	KnownJunction	0	29.21	8.85	13.98	6.80	20.61	1.47	4.04
17	E2_Dc	NovelBoundary	0	1.74	1.50	1.51	1.68	15.28	1.66	7.57
18	E2c_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	1.59
19	ER2d	ExonRegion	0	0.65	0.19	0.42	0.00	0.00	0.00	2.96
20	ER3a	ExonRegion	0	0.64	2.12	1.64	2.44	1.34	0.00	0.66
21	E3_Da	NovelBoundary	0	19.13	5.81	9.30	2.82	28.82	1.29	7.31
22	E3a_E6a	KnownJunction	0	0.00	1.63	0.00	0.00	0.00	0.00	0.00
23	I3_AR1	ActiveIntronRegion	0	10.41	0.00	6.77	1.31	7.33	0.00	2.91
24	I3_SR3	SilentIntronRegion	0	1.39	1.27	0.57	0.26	8.40	0.00	2.12
25	ER4a	ExonRegion	0	1.86	1.56	1.52	1.07	6.85	0.54	1.93
26	E4a_E6a	KnownJunction	0	2.65	0.00	4.14	0.00	1.96	0.00	1.12
27	E5_Aa	NovelBoundary	0	6.01	4.15	4.48	6.58	12.77	1.18	10.49
28	ER5a	ExonRegion	0	1.95	1.33	0.99	0.91	3.34	0.90	2.20
29	E5_Da	NovelBoundary	0	5.47	1.44	1.78	6.99	3.92	1.05	11.61
30	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	ER6a	ExonRegion	0	23.62	5.76	12.57	6.67	12.80	2.16	4.96
32	E6_Da	KnownBoundary	0	20.51	0.00	13.19	3.36	20.98	4.48	3.22
33	ER6b	ExonRegion	0	6.96	0.39	5.29	2.49	10.29	1.06	1.50
34	E6_Db	NovelBoundary	0	2.62	0.00	0.82	0.00	10.58	0.00	3.63
35	E6b_E7a	KnownJunction	0	0.83	1.13	0.00	0.00	1.11	0.00	0.00
36	I6_AR4	ActiveIntronRegion	0	11.26	4.71	8.74	0.96	5.33	0.96	6.46
37	ER7a	ExonRegion	0	13.74	4.10	10.08	2.85	8.28	0.87	5.32
38	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	ER8a	ExonRegion	0	19.30	3.08	11.66	3.09	17.12	1.39	7.66
40	E8a_E9a	KnownJunction	0	17.67	0.00	10.91	0.00	14.09	3.06	6.29
41	ER9a	ExonRegion	0	20.10	3.66	10.64	3.62	15.42	1.71	8.14
42	E9a_E10a	KnownJunction	0	14.37	2.89	10.09	1.54	8.39	1.63	5.13
43	ER10a	ExonRegion	0	10.42	2.45	6.09	2.75	8.10	3.93	3.20
44	E10a_E11a	KnownJunction	0	8.60	0.00	1.38	0.00	7.22	0.00	3.91
45	ER11a	ExonRegion	0	8.00	1.99	1.34	2.20	10.00	3.12	3.87
46	E11a_E12a	KnownJunction	0	2.07	1.05	0.73	0.00	2.14	0.00	0.00
47	E11b_E12b	KnownJunction	0	1.03	0.00	0.00	0.00	4.15	0.00	0.00
48	ER11b	ExonRegion	0	5.38	1.21	2.03	1.25	8.91	0.00	0.67
49	ER12a	ExonRegion	0	2.69	0.61	1.02	0.00	4.45	0.00	0.34
50	ER12b	ExonRegion	0	9.91	0.90	4.54	5.33	9.46	0.89	3.75
51	E12a_E13a	KnownJunction	0	8.51	0.00	3.52	2.36	1.13	0.00	1.59
52	ER13a	ExonRegion	0	13.79	3.58	8.71	4.00	12.02	1.13	7.58
53	E13a_E14a	KnownJunction	0	8.48	3.05	11.42	3.82	6.25	1.07	7.37
54	ER14a	ExonRegion	0	14.00	5.30	7.79	5.33	10.87	1.26	9.95
55	E14a_E15a	KnownJunction	0	12.60	4.26	2.67	4.42	15.65	1.05	7.22
56	ER15a	ExonRegion	0	17.64	8.02	9.36	6.35	14.26	3.24	9.36
57	E15a_E16a	KnownJunction	0	20.03	7.83	10.58	5.58	13.56	10.80	9.09
58	ER16a	ExonRegion	0	13.22	9.38	10.42	2.14	12.24	2.89	9.26
59	ER16b	ExonRegion	0	0.97	3.01	1.32	0.00	3.32	0.00	0.89
60	ER16c	ExonRegion	0	0.00	0.00	0.68	0.00	1.62	0.00	0.00
61	IG32_AR1	ActiveIntergenicRegion	0	2.33	8.23	9.11	15.78	0.56	9.71	0.44