Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 KIAA1841 Gene 0 13.45 2.98 5.66 1.22 35.73 2.65 13.80 2 402291 Transcript 0 7.58 3.00 1.91 0.47 21.86 1.05 7.14 3 356719 Transcript 0 0 0 0 0 0 0 0 4 295031 Transcript 0 1.24 0.33 0.91 0.42 1.17 0.00 1.19 5 IG20_AR1 ActiveIntergenicRegion 0 59.15 22.13 46.58 13.39 43.94 30.66 40.96 6 IG20_SR1 SilentIntergenicRegion 0 65.83 13.02 37.90 12.86 36.07 23.56 22.94 7 IG20_AR2 ActiveIntergenicRegion 0 54.58 19.91 38.71 22.96 26.69 55.72 30.00 8 IG20_SR2 SilentIntergenicRegion 0 5.14 3.33 4.07 2.71 5.92 1.63 7.41 9 IG20_AR4 ActiveIntergenicRegion 0 0.61 0.00 0.50 0.00 7.68 0.00 0.00 10 ER1a ExonRegion 0 2.74 1.39 0.00 0.00 11.77 0.13 3.54 11 E1a_E3a KnownJunction 0 4.84 4.65 0.00 0.00 22.06 1.10 7.07 12 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.15 0.00 0.00 13 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.90 0.00 0.00 14 ER3a ExonRegion 0 18.46 5.14 8.45 0.46 61.51 8.83 22.47 15 E3a_E4a KnownJunction 0 19.06 13.06 8.10 1.54 105.56 8.25 23.06 16 ER4a ExonRegion 0 23.37 11.45 11.37 3.22 74.46 11.23 29.14 17 E4a_E5a KnownJunction 0 19.49 13.27 10.76 2.71 62.63 7.75 23.45 18 ER5a ExonRegion 0 18.88 9.63 9.45 1.10 74.27 6.58 26.20 19 E5a_E6a KnownJunction 0 13.40 7.72 7.69 1.30 47.12 8.50 16.81 20 ER6a ExonRegion 0 7.50 3.92 6.23 1.95 60.31 3.30 20.31 21 E6a_E7a KnownJunction 0 8.48 4.15 8.38 1.16 74.71 6.14 20.24 22 ER7a ExonRegion 0 17.48 4.24 9.22 1.52 76.11 6.08 24.98 23 E7a_E8a KnownJunction 0 18.68 3.73 6.06 1.11 65.86 7.40 17.27 24 ER8a ExonRegion 0 19.21 3.50 8.99 0.11 62.84 6.44 19.68 25 E8a_E9a KnownJunction 0 21.21 5.28 12.36 0.00 77.25 1.37 25.37 26 ER9a ExonRegion 0 21.07 3.63 10.09 0.75 73.97 3.49 22.69 27 E9a_E10a KnownJunction 1 24.42 0.00 9.69 1.54 69.76 1.34 11.81 28 ER10a ExonRegion 0 21.84 0.34 8.74 0.72 63.08 1.96 24.92 29 E10a_E11a KnownJunction 0 13.90 1.29 7.52 0.00 58.02 1.66 16.70 30 ER11a ExonRegion 0 16.88 1.20 9.03 0.00 50.67 3.24 17.54 31 E11_Da NovelBoundary 0 7.69 0.00 2.53 0.00 25.73 0.00 6.59 32 E11a_E12a KnownJunction 0 18.54 1.44 8.33 0.00 32.02 2.79 13.43 33 I11 Intron 0 1.58 0.44 1.36 0.00 9.48 0.06 2.07 34 I11_AR1 ActiveIntronRegion 0 1.52 0.82 1.76 0.00 15.84 0.00 1.60 35 I11_AR2 ActiveIntronRegion 0 0.90 0.00 1.48 0.00 14.67 0.00 2.35 36 ER12a ExonRegion 0 11.50 2.16 5.63 0.60 41.07 4.22 21.73 37 E12a_E13a KnownJunction 0 17.74 1.63 4.34 2.30 33.43 3.27 25.31 38 E13_Aa NovelBoundary 0 10.77 1.00 2.73 0.00 8.88 1.02 12.30 39 ER13a ExonRegion 0 18.37 0.96 5.92 1.74 44.04 2.62 23.55 40 E13a_E14a KnownJunction 0 17.47 1.10 6.61 2.93 29.60 2.95 24.71 41 ER14a ExonRegion 0 17.16 2.65 5.09 1.55 46.81 1.11 20.98 42 E14a_E15a KnownJunction 0 16.22 4.54 4.11 2.71 46.77 4.48 23.22 43 ER15a ExonRegion 0 22.78 3.01 6.29 1.73 41.10 4.51 18.62 44 E15a_E16a KnownJunction 1 21.00 1.55 3.81 1.19 40.43 4.37 10.12 45 ER16a ExonRegion 0 20.70 1.14 5.19 0.49 45.18 6.80 14.15 46 E16a_E17a KnownJunction 0 13.80 0.00 4.84 1.30 42.72 6.06 9.76 47 ER17a ExonRegion 0 16.85 4.22 5.85 2.99 37.13 3.69 16.35 48 E17a_E18a KnownJunction 0 15.79 1.63 6.32 1.16 20.84 1.47 14.42 49 ER18a ExonRegion 0 14.92 3.60 6.20 2.94 27.17 3.14 16.75 50 E18a_E19a KnownJunction 1 3.19 0.00 1.19 1.35 23.08 1.66 16.50 51 E19a_E20a KnownJunction 0 4.41 4.28 3.36 3.36 22.85 1.13 13.56 52 ER19a ExonRegion 1 5.11 3.52 3.08 3.31 26.36 1.44 20.10 53 ER20a ExonRegion 1 8.26 6.32 9.72 2.34 32.62 5.20 31.21 54 E20a_E21a KnownJunction 1 11.97 3.73 13.49 2.52 42.51 5.17 36.59 55 ER21a ExonRegion 0 15.96 4.57 8.45 2.26 36.04 1.01 19.71 56 E21a_E22a KnownJunction 0 14.97 2.44 5.52 0.00 29.48 0.00 8.24 57 E21a_E24a KnownJunction 0 2.95 0.00 0.00 0.00 2.24 0.00 1.98 58 ER22a ExonRegion 0 20.15 0.58 6.67 0.03 37.38 0.00 17.48 59 E22a_E23a KnownJunction 0 13.99 1.63 8.54 0.00 34.44 0.00 12.63 60 ER23a ExonRegion 0 15.89 2.33 6.83 0.00 31.08 0.00 13.71 61 E23_Da KnownBoundary 0 15.74 2.65 4.07 0.00 24.99 0.00 13.43 62 ER23b ExonRegion 0 15.14 2.95 5.74 1.41 31.74 1.92 10.81 63 ER24a ExonRegion 0 1.04 1.32 1.59 1.35 1.16 0.00 1.34 64 E24a_E25a KnownJunction 0 0.00 0.00 1.54 0.00 1.01 0.00 0.00 65 ER25a ExonRegion 0 0.96 0.00 0.51 0.33 0.27 0.00 1.44