Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AC013414.7	Gene	0	4.08	2.05	4.05	4.56	2.17	4.18	3.09
2	356458	Transcript	0	3.24	1.22	2.48	2.73	2.07	2.50	2.37
3	ER1a	ExonRegion	0	0.66	0.00	1.20	0.00	2.69	0.00	0.67
4	E1a_E2a	KnownJunction	0	1.00	1.08	3.23	4.28	5.28	0.00	2.34
5	ER2a	ExonRegion	0	2.10	3.61	0.49	2.24	2.48	0.00	1.80
6	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	ER3a	ExonRegion	0	0.00	0.08	0.00	0.00	0.00	0.00	0.00
8	ER4a	ExonRegion	0	4.66	0.97	0.86	0.71	0.46	1.59	0.34
9	E4a_E5a	KnownJunction	0	2.97	0.00	1.41	1.60	1.96	3.97	1.49
10	ER5a	ExonRegion	0	6.30	3.05	1.78	3.16	1.00	3.10	3.67
11	E5a_E6a	KnownJunction	0	2.85	1.08	0.00	0.00	0.00	3.00	3.51
12	ER6a	ExonRegion	0	3.54	2.64	1.74	3.82	1.41	2.28	3.10
13	E6a_E7a	KnownJunction	0	1.94	0.00	1.26	4.39	1.11	2.89	4.82
14	ER7a	ExonRegion	0	2.67	0.53	2.07	3.65	1.47	2.23	4.59
15	E7a_E8a	KnownJunction	0	1.79	0.00	1.24	1.44	1.01	3.43	2.75
16	ER8a	ExonRegion	0	4.03	3.17	3.29	3.51	1.39	9.77	2.58
17	E8_Da	NovelBoundary	0	3.19	8.04	4.94	7.04	0.00	2.71	0.00
18	E8a_E9a	KnownJunction	0	2.57	1.18	2.28	1.68	2.35	1.34	1.33
19	E9_Aa	NovelBoundary	0	8.34	7.36	6.87	12.68	0.00	13.99	2.54
20	ER9a	ExonRegion	0	4.33	3.69	6.87	6.05	1.10	3.22	2.93
21	E9_Da	NovelBoundary	0	2.72	7.78	7.85	13.06	0.00	16.59	0.67
22	E9a_E10a	KnownJunction	0	1.97	1.63	1.32	2.71	0.00	2.68	0.00
23	E10_Aa	NovelBoundary	0	3.59	4.18	4.73	13.33	0.00	13.02	2.29
24	ER10a	ExonRegion	0	4.86	0.94	3.74	4.45	1.65	3.16	2.09
25	E10_Da	NovelBoundary	0	1.03	7.22	6.39	11.73	0.00	5.82	0.75
26	E10a_E11a	KnownJunction	0	3.30	1.47	2.30	0.00	1.18	2.33	0.73
27	I10_SR1	SilentIntronRegion	0	2.79	1.58	6.58	8.35	0.23	8.54	0.59
28	E11_Aa	NovelBoundary	0	2.90	3.02	9.61	6.39	0.00	6.08	2.31
29	ER11a	ExonRegion	0	4.38	1.14	6.90	4.77	3.23	7.06	2.66
30	E11a_E12a	KnownJunction	0	3.47	0.00	2.30	1.68	4.01	0.00	2.32
31	E12_Aa	NovelBoundary	0	1.03	1.16	3.10	13.76	0.00	5.95	1.71
32	ER12a	ExonRegion	0	4.40	1.60	6.16	9.43	4.73	7.53	5.42
33	E12_Da	NovelBoundary	0	1.03	3.73	8.74	15.60	0.00	9.43	1.35
34	E12a_E13a	KnownJunction	0	5.74	0.00	1.78	0.00	5.60	0.00	4.30
35	I12	Intron	0	2.84	1.57	11.05	8.97	0.10	7.68	1.49
36	I12_SR1	SilentIntronRegion	0	2.39	1.84	11.64	11.28	0.00	7.33	1.76
37	I12_AR1	ActiveIntronRegion	0	3.51	1.39	11.16	7.29	0.21	8.54	1.28
38	ER13a	ExonRegion	0	4.76	1.13	8.13	6.43	3.59	3.99	4.24
39	E13_Da	NovelBoundary	0	4.24	2.26	10.45	5.07	0.00	3.27	1.61
40	E13a_E14a	KnownJunction	0	5.47	0.00	0.63	0.00	4.15	0.00	1.38
41	E14_Aa	NovelBoundary	0	1.99	0.00	2.92	2.93	0.00	10.61	1.71
42	ER14a	ExonRegion	0	4.50	2.79	3.56	5.03	2.04	1.41	2.53
43	IG31	Intergenic	0	4.58	1.94	9.66	7.99	1.76	5.41	4.72
44	IG31_AR1	ActiveIntergenicRegion	0	4.16	1.36	8.97	7.79	0.86	4.01	3.17
45	IG31_AR2	ActiveIntergenicRegion	0	3.71	0.93	9.11	13.92	1.73	9.29	3.14
46	IG31_SR2	SilentIntergenicRegion	0	2.24	3.23	6.49	9.81	0.32	7.06	2.32
47	IG31_AR3	ActiveIntergenicRegion	0	6.70	2.37	7.53	10.11	3.27	5.86	3.73
48	IG31_AR4	ActiveIntergenicRegion	0	6.83	1.79	11.81	8.06	3.34	5.95	7.18
49	IG31_SR4	SilentIntergenicRegion	0	2.99	1.44	11.73	3.98	1.21	2.04	3.35
50	IG31_AR5	ActiveIntergenicRegion	0	3.18	1.21	11.52	2.49	1.39	1.23	4.34
51	IG31_SR5	SilentIntergenicRegion	0	2.35	0.87	11.85	1.18	1.55	0.54	4.17
52	IG31_AR6	ActiveIntergenicRegion	0	2.31	0.00	11.52	1.25	0.13	0.00	2.70