Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	FBXO11	Gene	0	211.88	181.92	331.15	388.56	193.04	362.01	168.98
2	403359	Transcript	0	0.19	22.03	0.46	36.23	1.28	27.62	3.05
3	378314	Transcript	0	8.53	9.49	6.57	4.06	0.77	7.94	0.00
4	316377	Transcript	0	0	0	0	0	0	0	0
5	402508	Transcript	0	4.32	0.49	9.94	0.00	2.20	0.00	0.55
6	405808	Transcript	1	6.98	7.73	7.32	6.64	3.64	28.35	5.09
7	IG47_SR1	SilentIntergenicRegion	0	5.10	18.60	2.47	38.60	2.64	36.40	2.26
8	ER1a	ExonRegion	0	0.19	22.03	0.46	36.23	1.28	27.62	3.05
9	E1_Ab	KnownBoundary	0	0.00	36.49	2.64	61.66	2.28	40.04	2.16
10	ER1b	ExonRegion	0	0.77	37.43	1.92	70.74	1.69	43.77	5.03
11	E1_Ac	KnownBoundary	0	3.57	39.91	2.33	60.95	0.85	41.08	7.78
12	ER1c	ExonRegion	0	12.29	21.88	11.53	41.19	9.67	36.51	6.14
13	E1a_E3a	KnownJunction	0	76.26	79.81	80.46	125.35	66.76	128.18	39.02
14	ER2a	ExonRegion	0	8.65	0.98	19.87	0.00	4.40	0.00	1.09
15	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	I2_SR2	SilentIntronRegion	0	43.50	9.68	44.53	8.04	9.00	3.55	9.30
17	I2_AR3	ActiveIntronRegion	1	50.28	10.98	40.98	16.12	12.20	8.66	6.99
18	ER3a	ExonRegion	0	123.97	153.37	178.07	269.61	109.55	236.16	83.77
19	E3a_E4a	KnownJunction	0	176.85	179.83	228.46	323.93	134.21	312.86	107.50
20	ER4a	ExonRegion	0	241.61	216.07	342.86	413.09	160.41	345.16	141.97
21	E4a_E5a	KnownJunction	0	274.28	246.45	397.60	461.33	186.36	397.71	153.85
22	ER5a	ExonRegion	0	218.46	237.53	397.81	420.28	192.82	380.25	164.99
23	E5a_E6a	KnownJunction	0	12.30	13.32	9.46	5.82	0.00	13.19	0.00
24	E5a_E7a	KnownJunction	0	208.52	212.82	415.73	413.95	201.41	339.07	170.79
25	E5a_E8a	NovelJunction	0	3.59	1.29	0.85	12.03	0.00	1.13	0.00
26	ER6a	ExonRegion	0	4.75	5.65	3.69	2.29	1.54	2.70	0.00
27	E6_Da	NovelBoundary	0	2262.50	1355.90	1738.58	1294.28	441.60	1341.41	1212.68
28	ER7a	ExonRegion	0	186.97	203.92	397.19	414.15	189.90	334.57	172.34
29	E7a_E8a	KnownJunction	0	173.11	205.55	384.22	442.70	199.41	375.73	196.23
30	ER8a	ExonRegion	0	239.45	225.69	447.98	474.78	198.81	370.13	205.00
31	E8a_E9a	KnownJunction	0	269.86	247.14	470.15	525.65	195.58	379.73	203.05
32	ER9a	ExonRegion	0	259.99	262.23	464.70	533.70	224.80	377.91	229.06
33	E9a_E10a	KnownJunction	0	262.78	242.80	409.96	546.56	275.64	393.23	198.05
34	ER10a	ExonRegion	0	267.24	230.58	441.15	478.95	265.47	359.40	227.20
35	E10a_E11a	KnownJunction	0	216.94	238.12	415.55	542.93	294.15	381.39	284.28
36	ER11a	ExonRegion	0	253.42	296.98	413.58	590.21	286.88	429.82	261.55
37	E11a_E12a	KnownJunction	0	292.22	238.68	460.38	543.42	361.91	403.85	212.84
38	E12_Aa	NovelBoundary	1	136.97	5.25	218.41	3.01	2.12	5.15	4.26
39	ER12a	ExonRegion	0	294.46	266.96	484.51	588.76	339.01	416.50	281.46
40	E12a_E13a	KnownJunction	0	269.46	285.31	443.74	589.42	351.74	436.73	264.89
41	ER13a	ExonRegion	0	328.87	299.62	535.60	626.57	318.37	451.53	272.99
42	E13a_E14a	KnownJunction	0	202.77	247.00	433.02	535.86	239.59	341.35	216.88
43	ER14a	ExonRegion	0	303.39	231.85	509.82	508.88	282.04	394.78	225.16
44	E14a_E15a	KnownJunction	0	387.14	281.39	571.84	655.17	205.95	560.12	214.38
45	ER15a	ExonRegion	0	354.20	300.58	535.87	641.27	289.52	553.78	260.76
46	E15a_E16a	KnownJunction	0	305.09	285.52	506.68	578.86	284.73	586.81	279.72
47	ER16a	ExonRegion	0	257.05	272.75	428.86	563.80	284.63	494.83	257.06
48	E16a_E17a	KnownJunction	0	205.29	271.94	323.56	492.16	243.60	428.13	227.15
49	ER17a	ExonRegion	0	170.21	233.24	329.09	496.23	199.13	508.10	236.77
50	E17a_E18a	KnownJunction	0	114.86	203.47	242.00	368.38	185.53	352.44	182.18
51	ER18a	ExonRegion	0	145.97	229.50	332.08	407.68	197.67	424.99	226.15
52	E18a_E19a	KnownJunction	0	165.93	276.11	357.23	440.04	258.08	532.70	221.95
53	I18	Intron	0	45.86	17.88	45.45	24.13	9.03	16.03	16.29
54	I18_AR1	ActiveIntronRegion	0	103.99	27.67	98.25	25.18	14.69	23.55	31.04
55	ER19a	ExonRegion	0	169.93	220.05	347.50	399.30	183.70	444.97	192.60
56	E19a_E20a	KnownJunction	0	143.52	194.75	301.91	364.84	167.55	362.71	163.41
57	ER20a	ExonRegion	0	204.60	220.18	359.15	426.45	196.20	427.69	200.98
58	E20a_E21a	KnownJunction	0	172.94	202.13	319.34	435.54	172.11	458.87	179.92
59	E20a_E22a	NovelJunction	1	32.03	4.89	29.95	14.79	11.94	32.48	3.71
60	I20_AR1	ActiveIntronRegion	0	45.02	17.00	48.89	24.14	17.85	17.86	10.16
61	ER21a	ExonRegion	0	325.44	282.32	479.68	557.04	247.86	547.06	235.97
62	E21a_E22a	KnownJunction	0	321.26	285.15	502.19	618.44	220.06	637.62	273.80
63	ER22a	ExonRegion	0	313.02	236.93	490.02	509.23	227.67	553.74	247.71
64	E22a_E23a	KnownJunction	0	412.74	203.45	506.87	434.05	307.73	481.56	232.70
65	ER23a	ExonRegion	0	408.64	227.12	540.61	553.91	400.32	597.78	280.25
66	E23a_E24a	KnownJunction	0	293.73	247.14	450.09	538.73	314.07	585.47	291.77
67	ER23b	ExonRegion	0	340.10	240.63	487.84	556.70	340.29	581.58	295.70
68	ER24a	ExonRegion	0	290.41	250.27	449.90	615.95	253.93	625.73	279.79
69	E24_Da	NovelBoundary	0	78.04	21.49	57.65	20.86	15.61	43.66	33.18
70	E24a_E25a	KnownJunction	0	313.47	228.04	398.40	492.49	233.32	471.41	217.19
71	ER25a	ExonRegion	0	334.10	265.23	416.34	541.23	278.76	504.42	251.22
72	E25_Da	KnownBoundary	0	329.21	265.00	429.67	584.60	322.51	511.66	257.55
73	E25a_E26a	KnownJunction	1	2.85	6.67	2.50	1.19	0.00	23.18	3.74
74	ER25b	ExonRegion	0	214.84	138.58	289.89	335.32	181.80	366.37	138.28
75	E25_Db	NovelBoundary	0	38.40	7.64	36.31	12.14	71.12	23.37	14.33
76	E25_Dc	NovelBoundary	0	27.37	43.64	52.26	56.89	64.76	114.78	27.50
77	ER25c	ExonRegion	0	11.53	4.25	11.85	4.99	12.15	12.87	3.04
78	Ix_SR1	SilentIntronRegion	0	44.64	24.26	66.62	29.49	17.82	30.07	30.40
79	ER26a	ExonRegion	0	11.11	8.79	12.14	12.09	7.28	33.51	6.45