Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	THUMPD2	Gene	0	38.61	51.30	88.72	116.49	87.76	47.05	33.62
2	260619	Transcript	0	20.63	34.13	48.37	82.11	105.72	25.33	16.37
3	378727	Transcript	0	18.80	38.11	42.63	105.36	23.01	30.59	19.54
4	403537	Transcript	0	7.95	7.52	22.15	23.06	3.74	9.58	6.65
5	ER1a	ExonRegion	0	1.34	1.21	2.03	3.43	0.00	0.00	0.00
6	ER1b	ExonRegion	0	5.77	6.28	12.89	11.12	5.88	6.43	0.79
7	E1a_E2a	KnownJunction	0	2.15	13.16	8.48	8.40	3.39	10.00	2.62
8	ER2a	ExonRegion	0	23.35	24.47	57.64	40.53	26.65	22.06	13.65
9	E2a_E3a	KnownJunction	0	21.15	30.16	58.44	54.67	43.75	16.75	15.32
10	E2a_E5a	NovelJunction	0	0.00	9.38	10.33	3.14	1.18	5.68	1.35
11	ER3a	ExonRegion	0	36.60	38.00	100.94	84.50	73.89	28.12	31.43
12	E3_Da	NovelBoundary	0	7.48	12.51	14.96	13.22	4.20	3.32	11.35
13	E3a_E4a	KnownJunction	1	4.04	3.26	13.48	22.35	1.13	5.74	2.34
14	E3a_E5a	KnownJunction	0	17.31	21.04	62.65	66.48	120.31	16.00	18.92
15	E4_Aa	NovelBoundary	0	14.04	7.04	31.30	8.75	0.97	2.81	10.38
16	ER4a	ExonRegion	0	11.86	11.79	30.82	23.77	6.36	13.43	10.95
17	E4a_E5a	NovelJunction	1	11.38	12.22	27.23	27.55	4.52	10.85	3.17
18	I4	Intron	0	5.46	9.66	19.56	8.70	3.91	4.86	3.70
19	I4_AR1	ActiveIntronRegion	0	5.48	9.70	19.66	8.74	3.93	4.89	3.72
20	E5_Aa	NovelBoundary	0	5.66	4.20	24.54	3.33	4.40	11.90	4.14
21	ER5a	ExonRegion	0	37.07	54.48	99.44	125.16	138.97	45.25	32.77
22	E5a_E6a	KnownJunction	0	36.58	67.07	88.95	142.74	148.67	42.88	41.17
23	ER6a	ExonRegion	0	33.54	65.05	89.81	157.82	142.63	62.34	46.25
24	E6a_E7a	KnownJunction	0	26.50	59.61	86.34	147.86	152.10	64.45	42.48
25	ER7a	ExonRegion	0	34.92	73.89	100.07	178.64	140.38	65.95	39.72
26	E7a_E8a	KnownJunction	0	15.94	34.00	41.95	92.27	23.47	19.86	15.19
27	E7a_E9a	KnownJunction	0	20.63	34.13	48.37	82.11	105.72	25.33	16.37
28	I7_SR1	SilentIntronRegion	1	6.62	7.39	3.44	1.88	4.32	1.01	8.46
29	ER8a	ExonRegion	0	18.49	38.57	47.14	117.40	24.56	33.05	25.85
30	E8a_E9a	KnownJunction	0	21.96	41.77	38.80	106.41	21.00	38.86	17.58
31	ER9a	ExonRegion	0	29.79	79.67	87.13	165.08	128.34	63.41	40.43
32	E9a_E10a	KnownJunction	0	24.15	62.74	89.73	140.98	154.94	49.55	40.24
33	E9a_E11a	NovelJunction	0	1.67	12.82	7.90	40.28	0.00	9.92	0.64
34	ER10a	ExonRegion	0	36.65	59.43	107.42	147.67	149.62	57.38	43.14
35	E10a_E11a	KnownJunction	0	50.29	61.61	110.45	133.72	108.33	57.78	39.40
36	ER11a	ExonRegion	0	45.12	86.28	117.13	185.84	115.88	63.66	53.45
37	E11a_E12a	KnownJunction	0	50.19	87.64	144.39	229.81	144.22	76.81	59.91
38	ER12a	ExonRegion	0	62.77	75.38	120.29	170.63	129.08	75.38	47.52