Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 CNRIP1 Gene 0 0.20 0.36 5.07 3.84 16.53 63.52 0.03 2 409862 Transcript 0 0.02 0.02 0.43 0.18 2.00 4.29 0.00 3 263655 Transcript 0 0.14 0.30 6.99 5.40 24.16 122.76 0.00 4 409559 Transcript 0 0.19 0.00 0.24 0.30 1.65 10.72 0.16 5 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.06 7.29 0.00 6 E1_Da NovelBoundary 0 0.00 1.44 1.44 0.00 0.00 37.25 0.00 7 E1a_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.92 2.25 0.00 8 ER2a ExonRegion 0 0.00 0.00 0.36 1.54 0.36 25.44 0.00 9 E2_Ab KnownBoundary 0 0.00 1.63 0.79 1.33 0.88 36.80 0.00 10 ER2b ExonRegion 0 0.00 0.00 1.49 1.51 3.45 30.02 0.00 11 E2_Ac KnownBoundary 0 0.00 0.00 2.66 3.36 10.60 43.31 0.00 12 ER2c ExonRegion 0 0.00 0.52 3.59 7.50 11.03 81.94 0.00 13 E2a_E3a KnownJunction 0 0.00 0.00 4.61 10.38 14.48 111.78 0.00 14 E3_Aa NovelBoundary 0 0.00 0.00 1.62 3.36 1.18 22.62 0.00 15 ER3a ExonRegion 0 0.18 0.61 9.64 11.61 34.21 164.32 0.00 16 E3_Da KnownBoundary 0 1.03 0.00 0.89 0.00 4.29 3.19 0.00 17 E3a_E4a KnownJunction 0 0.00 0.00 8.00 6.45 31.91 188.86 0.00 18 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 2.05 14.95 0.00 19 ER3b ExonRegion 0 0.07 0.07 1.28 0.53 5.02 3.32 0.00 20 ER4a ExonRegion 0 0.42 0.90 12.61 8.22 40.23 153.99 0.00 21 ER5a ExonRegion 0 0.37 0.00 0.48 0.60 1.25 6.48 0.33