Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AC008074.1	Gene	0	296.61	292.74	97.26	166.31	107.30	141.25	154.62
2	238875	Transcript	0	437.75	653.55	135.77	319.47	115.40	237.62	211.74
3	409537	Transcript	0	23.12	5.67	6.89	4.26	9.01	8.07	8.21
4	IG50_AR9	ActiveIntergenicRegion	0	0.00	0.00	0.48	0.00	8.53	0.00	0.00
5	IG50_SR14	SilentIntergenicRegion	0	0.38	1.03	0.13	0.05	22.07	0.37	0.31
6	IG50_AR19	ActiveIntergenicRegion	0	1.43	0.44	0.39	0.46	10.09	0.00	0.43
7	IG50_SR20	SilentIntergenicRegion	0	0.24	0.29	0.08	0.00	8.15	0.00	0.00
8	IG50_AR21	ActiveIntergenicRegion	0	0.28	0.00	0.54	0.00	8.37	0.00	0.00
9	IG50_AR23	ActiveIntergenicRegion	0	0.38	0.00	0.00	0.00	11.07	0.00	0.00
10	IG50_SR22	SilentIntergenicRegion	0	0.73	0.01	0.00	0.00	9.36	0.00	0.00
11	IG50_AR24	ActiveIntergenicRegion	0	3.68	8.09	1.50	1.46	34.46	2.54	2.43
12	IG50_SR24	SilentIntergenicRegion	0	0.00	0.00	0.00	0.00	16.48	0.00	0.00
13	IG50_AR26	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	20.44	0.00	0.00
14	IG50_SR25	SilentIntergenicRegion	0	0.44	0.32	0.06	0.02	10.48	0.01	0.01
15	IG50_AR30	ActiveIntergenicRegion	0	1.14	6.18	1.70	8.59	0.13	1.83	0.29
16	IG50_AR32	ActiveIntergenicRegion	0	1.70	8.31	1.98	5.07	1.48	3.28	0.32
17	IG50_AR33	ActiveIntergenicRegion	0	3.99	5.94	6.36	8.75	1.66	3.29	0.76
18	IG50_SR32	SilentIntergenicRegion	0	3.35	9.07	4.19	6.25	1.04	0.68	0.38
19	IG50_AR34	ActiveIntergenicRegion	0	1.40	7.45	0.61	9.42	3.26	0.37	0.00
20	IG50_AR35	ActiveIntergenicRegion	0	2.29	10.08	2.71	9.84	4.68	3.12	0.93
21	IG50_SR41	SilentIntergenicRegion	0	5.09	6.44	3.60	10.67	0.79	6.06	0.74
22	IG50_AR47	ActiveIntergenicRegion	0	16.87	30.45	8.37	35.87	0.57	14.47	2.39
23	IG50_SR42	SilentIntergenicRegion	0	17.61	34.94	5.43	32.54	1.54	15.41	6.97
24	IG50_AR48	ActiveIntergenicRegion	0	3.45	15.11	2.39	12.54	0.23	9.39	1.64
25	IG50_SR43	SilentIntergenicRegion	0	2.80	6.26	1.42	12.72	1.62	7.72	0.71
26	IG50_AR49	ActiveIntergenicRegion	0	4.00	14.20	0.90	15.03	1.22	5.15	1.57
27	ER1a	ExonRegion	0	4.00	27.46	1.22	6.36	2.59	4.78	8.70
28	ER1b	ExonRegion	1	47.10	189.61	15.14	42.62	39.86	37.19	64.46
29	E1a_E2a	KnownJunction	1	100.62	416.35	32.53	101.37	68.49	82.06	139.60
30	I1	Intron	0	36.37	45.33	13.51	42.88	1.56	37.90	1.47
31	I1_AR1	ActiveIntronRegion	0	36.46	45.44	13.54	42.98	1.56	37.99	1.47
32	E2_Aa	NovelBoundary	1	113.12	112.52	56.17	102.76	2.05	86.19	4.84
33	ER2a	ExonRegion	0	148.52	523.20	61.19	166.12	64.52	135.88	134.56
34	E2a_E3a	KnownJunction	0	175.31	551.02	75.27	249.70	92.49	201.40	130.79
35	E2a_E4a	NovelJunction	0	17.47	49.55	4.57	26.47	6.39	16.35	3.40
36	ER3a	ExonRegion	0	374.96	687.30	118.37	309.55	119.56	224.16	229.37
37	E3a_E4a	KnownJunction	0	449.94	649.04	146.88	337.77	143.43	229.19	263.43
38	E3a_E5a	KnownJunction	0	0.00	1.63	0.00	0.00	1.01	0.00	0.00
39	ER4a	ExonRegion	0	586.19	893.17	182.59	420.18	153.27	315.29	286.26
40	E4a_E5a	KnownJunction	0	710.87	1044.55	212.41	513.57	162.32	401.22	288.56
41	ER5a	ExonRegion	0	286.67	244.54	94.40	150.44	106.92	131.37	147.59
42	ER5b	ExonRegion	0	46.23	9.72	13.77	8.52	17.01	16.14	16.42