Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	USP34	Gene	0	298.99	107.30	409.85	212.84	180.75	140.87	140.62
2	398571	Transcript	0	143.87	78.75	206.23	121.66	48.57	64.57	60.11
3	263989	Transcript	0	0	0	0	0	0	0	0
4	398569	Transcript	1	58.50	38.91	104.13	86.39	22.78	84.31	15.39
5	IG24_AR5	ActiveIntergenicRegion	0	2.30	1.91	3.97	0.50	8.42	0.52	2.31
6	IG24_SR2	SilentIntergenicRegion	0	3.28	2.04	3.86	11.75	0.00	6.17	0.74
7	ER1a	ExonRegion	0	48.20	32.15	85.06	58.07	35.52	27.54	35.67
8	E1a_E2a	KnownJunction	0	92.66	70.07	172.24	117.63	52.70	53.84	66.18
9	ER2a	ExonRegion	0	82.86	78.17	140.73	136.77	30.28	54.70	51.96
10	E2a_E3a	KnownJunction	0	90.34	91.29	127.58	140.17	17.61	79.89	38.02
11	ER3a	ExonRegion	0	259.73	113.38	330.86	165.52	63.26	95.85	75.99
12	E3_Ab	KnownBoundary	0	235.66	90.24	270.59	121.58	62.45	62.95	48.70
13	ER3b	ExonRegion	0	309.78	99.69	378.70	127.07	78.68	75.55	85.55
14	E3_Da	KnownBoundary	0	55.43	19.70	51.43	14.90	23.61	4.29	8.97
15	E3a_E3c	KnownJunction	0	237.43	63.60	295.28	76.13	52.91	58.93	75.86
16	E3_Ac	KnownBoundary	0	120.89	38.20	186.80	54.13	30.29	41.89	49.07
17	ER3c	ExonRegion	0	289.44	87.47	380.92	111.81	92.05	75.60	92.87
18	ER3d	ExonRegion	0	294.34	101.38	398.49	148.39	106.98	98.71	101.70
19	E3b_E4a	KnownJunction	0	269.04	104.22	337.44	167.12	106.07	107.33	86.25
20	ER4a	ExonRegion	0	336.35	128.32	426.78	174.72	120.21	103.42	104.76
21	E4a_E5a	KnownJunction	0	345.57	140.84	429.41	166.61	128.08	84.29	94.83
22	ER5a	ExonRegion	0	368.98	135.44	462.06	217.10	122.77	112.20	116.52
23	E5a_E6a	KnownJunction	0	330.14	136.45	421.30	181.29	118.63	97.58	129.46
24	ER6a	ExonRegion	0	338.42	126.35	393.29	189.04	121.60	99.47	109.49
25	E6a_E7a	KnownJunction	0	300.15	100.44	335.35	180.07	123.08	78.17	83.52
26	ER7a	ExonRegion	0	281.65	115.88	382.65	215.08	113.14	97.74	118.94
27	E7a_E8a	KnownJunction	0	225.31	100.88	333.81	210.17	100.35	78.36	115.94
28	ER8a	ExonRegion	0	222.23	104.87	341.98	220.57	117.79	101.38	122.51
29	E8a_E9a	KnownJunction	0	221.33	110.73	323.33	219.74	135.99	117.30	112.52
30	ER9a	ExonRegion	0	312.07	112.48	407.42	192.34	124.18	96.36	121.20
31	E9a_E10a	KnownJunction	0	319.51	92.69	405.83	205.05	127.46	91.20	116.86
32	ER10a	ExonRegion	0	262.35	92.07	403.03	178.97	120.35	104.88	126.24
33	E10a_E11a	KnownJunction	0	249.33	83.33	385.54	145.72	108.90	94.15	110.15
34	ER11a	ExonRegion	0	241.17	90.30	350.26	177.34	106.14	87.36	112.39
35	E11a_E12a	KnownJunction	0	181.24	94.31	275.90	187.93	94.89	102.21	120.81
36	ER12a	ExonRegion	0	175.21	103.63	305.50	178.09	102.51	88.86	117.47
37	E12a_E13a	KnownJunction	0	120.77	89.51	220.96	157.21	95.12	100.50	105.29
38	ER13a	ExonRegion	0	147.92	121.35	262.18	193.56	97.16	108.36	144.83
39	E13a_E14a	KnownJunction	0	111.42	109.00	195.80	146.24	81.86	77.18	113.02
40	ER14a	ExonRegion	0	149.07	127.86	255.05	205.36	91.74	96.16	127.40
41	E14a_E15a	KnownJunction	0	103.11	103.46	225.67	202.51	79.65	85.87	131.33
42	ER15a	ExonRegion	0	297.35	123.55	357.62	211.83	130.48	102.79	122.13
43	E15a_E16a	KnownJunction	0	102.11	58.40	122.19	142.91	66.02	55.56	47.04
44	ER16a	ExonRegion	0	193.20	69.31	265.84	158.57	106.08	75.25	114.01
45	E16a_E17a	KnownJunction	0	206.25	78.74	265.42	145.40	84.00	77.37	95.46
46	ER17a	ExonRegion	0	247.01	89.89	328.30	167.57	120.86	81.76	107.34
47	E17a_E18a	KnownJunction	0	293.26	72.12	364.43	150.06	145.05	69.79	99.46
48	ER18a	ExonRegion	0	344.55	89.90	420.37	166.84	140.95	85.02	108.36
49	E18a_E19a	KnownJunction	0	347.23	101.25	418.84	197.55	137.63	77.10	104.56
50	ER19a	ExonRegion	0	439.53	108.76	516.26	188.04	170.45	92.05	143.70
51	E19a_E20a	KnownJunction	0	450.08	116.86	515.41	188.04	172.64	75.28	136.21
52	ER20a	ExonRegion	0	381.26	95.43	472.74	181.80	153.15	73.02	135.00
53	E20a_E21a	KnownJunction	0	328.09	98.44	466.72	169.83	169.42	75.52	140.85
54	ER21a	ExonRegion	0	353.96	94.79	424.52	177.23	165.46	77.08	138.36
55	E21a_E22a	KnownJunction	0	358.35	89.80	383.75	168.40	151.25	78.68	118.94
56	ER22a	ExonRegion	0	322.20	105.70	412.22	166.93	139.24	83.15	135.65
57	E22a_E23a	KnownJunction	0	254.67	85.78	335.48	157.45	112.38	81.87	116.53
58	E22a_E24a	NovelJunction	0	6.39	2.92	13.11	2.90	0.99	11.68	1.98
59	ER23a	ExonRegion	0	192.65	70.06	296.09	123.90	97.78	63.78	98.14
60	E23a_E24a	KnownJunction	0	143.28	75.35	249.54	101.86	76.14	56.20	89.20
61	ER24a	ExonRegion	0	151.84	73.95	296.12	125.51	89.80	58.00	101.28
62	E24_Da	NovelBoundary	1	72.77	0.00	118.90	0.00	0.00	0.00	1.61
63	E24a_E25a	KnownJunction	0	172.26	61.37	311.43	131.96	99.15	65.55	98.70
64	ER25a	ExonRegion	0	148.56	77.31	290.97	147.62	86.20	82.98	106.80
65	E25a_E26a	KnownJunction	0	163.53	71.59	259.61	152.28	80.36	77.29	98.50
66	ER26a	ExonRegion	0	191.98	90.02	288.58	153.11	111.74	100.46	109.29
67	E26a_E27a	KnownJunction	0	227.02	86.07	268.67	168.70	111.16	93.24	111.34
68	ER27a	ExonRegion	0	290.52	102.03	377.07	189.74	133.52	106.82	113.85
69	E27a_E28a	KnownJunction	0	350.44	98.33	405.17	258.07	171.01	123.71	118.36
70	ER28a	ExonRegion	0	424.27	119.83	488.75	254.89	190.38	112.69	140.19
71	E28a_E29a	KnownJunction	0	453.68	119.43	529.33	264.49	147.24	121.46	136.74
72	ER29a	ExonRegion	0	316.93	98.42	389.56	202.07	133.73	119.45	132.13
73	E29a_E30a	KnownJunction	0	239.33	93.00	317.46	157.53	97.35	87.39	109.00
74	ER30a	ExonRegion	0	202.67	77.67	270.68	132.92	76.87	72.02	95.44
75	E30a_E31a	KnownJunction	0	194.22	66.02	300.64	145.80	74.53	57.83	119.54
76	ER31a	ExonRegion	0	199.27	51.23	319.52	130.21	82.99	60.66	98.52
77	E31a_E32a	KnownJunction	0	196.49	44.14	271.54	128.87	93.89	46.93	84.93
78	ER32a	ExonRegion	0	230.84	49.16	331.40	122.80	87.35	69.93	89.31
79	E32a_E33a	KnownJunction	0	209.88	65.89	322.97	122.94	107.24	87.29	83.15
80	ER33a	ExonRegion	0	182.90	52.55	291.09	113.98	94.45	74.98	83.72
81	E33a_E34a	KnownJunction	0	224.76	57.48	302.68	133.45	113.56	91.87	96.58
82	ER34a	ExonRegion	0	166.87	77.61	269.20	143.74	105.07	92.35	106.80
83	E34a_E35a	KnownJunction	0	166.38	93.34	289.38	143.72	129.49	76.57	113.09
84	E34a_E36a	NovelJunction	1	0.93	1.23	8.32	9.92	1.18	0.00	1.69
85	ER35a	ExonRegion	0	192.32	69.85	299.53	155.96	134.78	81.48	120.14
86	E35a_E36a	KnownJunction	0	149.71	40.43	225.89	129.36	91.50	65.45	83.22
87	ER36a	ExonRegion	0	186.94	76.71	306.11	167.55	130.15	95.36	108.17
88	E36a_E37a	KnownJunction	0	168.85	82.65	288.80	166.75	177.02	106.90	91.39
89	ER37a	ExonRegion	0	274.88	83.45	413.81	224.74	156.48	108.03	129.00
90	E37a_E38a	KnownJunction	0	222.43	75.45	328.19	212.45	147.49	118.21	124.40
91	ER38a	ExonRegion	0	259.58	84.33	389.31	178.94	168.62	101.86	130.32
92	E38a_E39a	KnownJunction	0	213.50	95.31	356.13	175.28	150.24	91.60	125.90
93	E38a_E40a	NovelJunction	0	2.95	6.99	7.36	15.09	0.00	8.60	3.11
94	ER39a	ExonRegion	0	300.88	97.41	401.37	180.90	184.65	94.00	146.59
95	E39a_E40a	KnownJunction	0	262.10	82.60	321.90	159.13	188.25	88.25	121.70
96	ER40a	ExonRegion	0	250.70	83.63	357.53	169.39	183.50	88.07	123.23
97	E40a_E41a	KnownJunction	0	231.44	85.22	340.92	158.97	189.38	86.51	103.10
98	ER41a	ExonRegion	0	339.76	93.16	445.59	192.03	180.39	108.78	139.81
99	E41a_E42a	KnownJunction	0	301.39	77.84	426.12	186.71	168.93	98.46	139.23
100	ER42a	ExonRegion	0	236.14	79.83	348.99	195.45	161.42	103.01	128.91
101	E42a_E43a	KnownJunction	0	160.32	89.43	268.75	195.44	132.85	82.30	119.93
102	ER43a	ExonRegion	0	171.92	91.74	301.13	206.13	145.91	95.62	143.36
103	E43a_E44a	KnownJunction	0	208.64	93.84	297.37	208.55	149.11	78.31	133.18
104	ER44a	ExonRegion	0	230.20	89.88	370.74	179.18	135.11	85.89	136.26
105	E44a_E45a	KnownJunction	0	246.28	91.35	404.07	164.44	136.13	117.30	131.72
106	ER45a	ExonRegion	0	319.09	98.91	472.31	184.62	160.74	110.81	141.65
107	E45a_E46a	KnownJunction	0	382.70	92.55	526.27	161.52	155.19	92.30	126.36
108	ER46a	ExonRegion	0	402.53	85.91	542.32	168.71	170.98	103.67	136.18
109	E46a_E47a	KnownJunction	0	369.06	61.90	471.98	149.71	177.28	90.72	119.24
110	ER47a	ExonRegion	0	438.74	68.84	515.29	153.78	225.19	87.60	131.84
111	E47a_E48a	KnownJunction	0	484.96	55.46	544.49	178.96	307.55	105.67	131.13
112	ER48a	ExonRegion	0	646.66	101.61	684.46	252.25	300.26	157.38	184.79
113	E48a_E49a	KnownJunction	0	728.42	109.58	740.35	302.74	301.60	178.25	181.42
114	ER49a	ExonRegion	0	576.09	98.52	635.02	272.45	295.87	147.33	180.48
115	E49a_E50a	KnownJunction	0	406.23	73.93	439.83	171.19	230.94	89.51	117.43
116	ER50a	ExonRegion	0	321.38	84.70	471.33	189.55	198.29	111.84	160.29
117	E50a_E51a	KnownJunction	0	343.43	88.51	481.64	171.95	203.19	121.89	137.62
118	ER51a	ExonRegion	0	356.29	95.36	527.06	177.86	215.57	114.22	172.48
119	E51a_E52a	KnownJunction	0	300.90	85.93	475.47	167.80	217.53	103.05	138.66
120	ER52a	ExonRegion	0	357.54	85.83	521.74	165.57	196.43	97.65	144.48
121	E52a_E53a	KnownJunction	0	350.52	72.40	478.46	162.41	189.47	90.48	137.57
122	E53_Aa	NovelBoundary	1	89.46	0.00	102.10	0.00	1.15	0.00	2.65
123	ER53a	ExonRegion	0	535.54	112.89	637.03	219.50	298.29	128.38	168.40
124	E53a_E54a	KnownJunction	0	709.59	117.22	801.98	260.70	354.55	156.54	187.01
125	ER54a	ExonRegion	0	665.41	123.06	802.34	284.08	326.84	172.39	198.21
126	E54a_E55a	KnownJunction	0	555.47	104.72	682.68	234.15	325.02	172.86	180.58
127	ER55a	ExonRegion	0	549.86	98.56	608.88	218.91	280.30	160.93	184.68
128	E55a_E56a	KnownJunction	0	428.90	83.67	435.72	183.03	268.45	127.00	147.80
129	ER56a	ExonRegion	0	362.81	94.96	442.57	195.33	243.21	159.92	155.38
130	E56a_E57a	KnownJunction	0	241.87	83.91	335.40	162.65	228.78	178.57	125.20
131	ER57a	ExonRegion	0	268.49	107.63	427.59	214.01	240.27	159.84	162.17
132	E57a_E58a	KnownJunction	0	268.49	117.25	440.54	230.30	235.44	139.52	185.32
133	ER58a	ExonRegion	0	225.56	96.03	374.37	213.80	213.27	162.94	170.56
134	E58a_E59a	KnownJunction	0	219.41	81.78	316.84	213.07	181.96	165.94	139.03
135	E59_Aa	NovelBoundary	1	96.15	4.89	139.97	1.41	2.05	0.00	3.50
136	ER59a	ExonRegion	0	196.57	113.63	338.06	223.77	195.03	138.78	159.24
137	E59a_E60a	KnownJunction	0	190.43	118.35	351.10	193.24	184.49	122.72	156.43
138	ER60a	ExonRegion	0	266.62	122.64	442.42	256.85	215.90	162.62	187.21
139	E60a_E61a	KnownJunction	0	451.33	116.72	585.73	267.52	283.50	178.62	196.41
140	ER61a	ExonRegion	0	399.80	121.16	555.97	311.21	263.49	189.18	195.18
141	E61a_E62a	KnownJunction	0	351.31	121.27	532.98	333.55	253.35	210.22	184.22
142	ER62a	ExonRegion	0	401.27	139.56	542.51	295.12	258.45	201.97	163.20
143	E62a_E63a	KnownJunction	0	269.93	113.44	394.03	248.59	242.54	150.91	138.14
144	ER63a	ExonRegion	0	336.40	117.39	488.63	280.97	260.14	180.02	174.06
145	E63a_E64a	KnownJunction	0	313.85	102.67	461.32	275.27	270.69	187.06	172.91
146	ER64a	ExonRegion	0	336.50	129.94	511.79	320.23	259.82	203.21	200.49
147	E64a_E65a	KnownJunction	0	275.17	129.33	432.91	267.58	217.66	169.45	174.60
148	E64a_E66a	NovelJunction	1	1.39	0.00	2.96	10.65	0.00	8.44	0.00
149	ER65a	ExonRegion	0	282.31	139.55	462.20	283.31	208.47	190.36	192.68
150	E65a_E66a	KnownJunction	0	216.15	118.72	362.69	237.75	175.94	167.31	149.06
151	ER66a	ExonRegion	0	273.09	134.06	419.77	256.24	243.56	178.67	177.41
152	E66a_E67a	KnownJunction	0	268.52	133.59	447.26	242.09	247.24	162.57	195.27
153	E66a_E68a	NovelJunction	0	2.32	5.10	7.21	14.76	0.90	14.26	3.71
154	ER67a	ExonRegion	0	235.57	123.83	403.38	239.16	191.16	167.94	176.49
155	E67a_E68a	KnownJunction	0	232.37	112.31	326.09	223.20	156.74	166.91	137.60
156	ER68a	ExonRegion	0	383.70	184.43	569.89	340.72	298.37	254.99	231.18
157	E68a_E69a	KnownJunction	0	185.22	121.06	331.70	260.07	188.16	207.78	141.75
158	ER69a	ExonRegion	0	268.88	147.31	481.24	306.44	261.79	192.71	192.63
159	E69a_E70a	KnownJunction	0	364.17	154.98	572.33	317.81	221.56	218.26	169.40
160	ER70a	ExonRegion	0	441.24	154.59	605.10	299.26	284.56	240.78	184.15
161	E70a_E71a	KnownJunction	0	558.01	161.28	671.14	324.98	331.27	254.87	215.93
162	ER71a	ExonRegion	0	830.83	202.06	924.02	436.50	453.20	353.47	272.02
163	E71a_E72a	KnownJunction	0	900.56	198.82	964.11	438.55	336.50	424.78	250.71
164	ER72a	ExonRegion	0	729.35	173.44	821.09	342.23	400.91	310.74	250.05
165	E72a_E73a	KnownJunction	0	592.11	148.09	678.42	299.90	442.38	298.74	210.70
166	ER73a	ExonRegion	0	428.55	137.51	605.55	294.87	355.83	265.54	199.76
167	E73a_E74a	KnownJunction	0	269.34	112.28	433.12	236.18	303.33	154.63	196.18
168	E73a_E75a	NovelJunction	0	7.46	0.97	7.87	2.74	3.00	2.39	12.84
169	E73a_E76a	KnownJunction	1	58.50	38.91	104.13	86.39	22.78	84.31	15.39
170	ER74a	ExonRegion	0	327.53	126.49	470.04	247.46	344.69	163.22	192.57
171	E74a_E75a	KnownJunction	0	258.89	132.99	416.78	238.70	323.34	159.57	199.59
172	E74a_E76a	NovelJunction	0	10.25	9.93	17.83	14.06	2.21	23.13	0.89
173	E74a_E77a	NovelJunction	0	5.77	3.02	5.14	4.28	1.15	13.64	0.00
174	ER75a	ExonRegion	0	325.06	144.79	464.84	247.48	321.43	160.92	210.56
175	E75a_E76a	KnownJunction	0	407.08	140.21	534.76	259.75	372.56	180.60	202.63
176	ER76a	ExonRegion	0	379.93	165.60	554.76	329.20	399.89	260.89	227.40
177	E76a_E77a	KnownJunction	0	341.91	145.46	493.39	256.80	336.69	236.67	197.60
178	ER77a	ExonRegion	0	501.46	164.93	747.95	380.24	450.79	330.98	257.85
179	E77a_E78a	KnownJunction	0	641.18	211.80	871.49	412.60	379.57	414.14	245.12
180	E78_Aa	NovelBoundary	0	76.99	20.52	60.17	46.22	15.93	35.19	40.07
181	ER78a	ExonRegion	0	496.16	181.80	734.37	419.51	329.40	400.83	235.60
182	E78_Da	NovelBoundary	0	83.10	18.73	44.71	25.01	18.03	16.40	28.68
183	E78a_E79a	KnownJunction	0	503.62	158.57	787.67	416.90	467.35	372.17	240.40
184	I78	Intron	0	62.58	21.21	54.40	25.93	28.64	22.56	32.53
185	I78_AR1	ActiveIntronRegion	0	62.71	21.26	54.52	25.98	28.69	22.61	32.59
186	E79_Aa	NovelBoundary	0	82.80	25.67	66.98	33.16	26.65	32.08	33.45
187	ER79a	ExonRegion	0	399.39	177.29	606.29	390.20	353.46	369.65	209.42
188	E79a_E80a	KnownJunction	0	227.65	140.81	386.35	358.14	215.41	311.65	155.58
189	E80_Aa	NovelBoundary	0	73.45	40.17	52.41	38.28	22.78	42.64	40.13
190	ER80a	ExonRegion	0	148.53	60.25	187.40	134.80	113.27	142.03	73.21