Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 MSH2 Gene 0 50.53 11.54 31.29 12.54 1009.66 6.65 41.80 2 233146 Transcript 0 4.06 0.00 1.74 0.00 12.96 0.00 1.25 3 406134 Transcript 0 0.78 1.83 1.59 0.31 26.96 0.10 0.00 4 394792 Transcript 0 2.94 1.29 0.50 2.84 37.25 0.00 2.26 5 394794 Transcript 0 0.00 0.00 0.00 0.00 3.32 0.00 0.00 6 ER1a ExonRegion 0 4.06 0.00 1.74 0.00 12.96 0.00 1.25 7 ER1b ExonRegion 0 6.88 0.00 3.26 0.00 36.77 0.00 3.16 8 E1_Ad KnownBoundary 0 18.44 0.00 7.36 0.00 135.16 1.18 15.68 9 ER1c ExonRegion 0 10.03 0.00 4.74 0.00 92.81 1.29 7.35 10 ER1d ExonRegion 0 16.05 5.84 8.63 6.15 149.23 3.97 14.68 11 E1a_E2a KnownJunction 0 30.84 6.67 19.40 13.25 696.33 4.82 29.87 12 ER2a ExonRegion 0 46.42 16.78 34.05 18.58 994.26 4.70 38.80 13 E2a_E3a KnownJunction 0 53.17 19.47 41.10 22.68 962.39 6.30 50.95 14 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 3.32 0.00 0.00 15 ER3a ExonRegion 0 78.04 15.82 50.85 19.12 1199.47 5.97 49.02 16 E3a_E4a KnownJunction 0 102.33 10.88 52.49 16.47 1311.87 5.47 52.78 17 ER4a ExonRegion 0 89.11 13.26 52.59 20.35 1336.02 11.86 63.04 18 E4a_E5a KnownJunction 0 83.53 13.77 41.23 13.19 1172.65 10.10 67.82 19 E4a_E6a KnownJunction 0 2.94 1.29 0.50 2.84 37.25 0.00 2.26 20 ER5a ExonRegion 0 58.69 14.44 33.67 11.27 1016.80 14.00 58.28 21 E5a_E6a KnownJunction 0 46.56 18.26 30.36 11.11 1100.68 14.82 58.27 22 ER6a ExonRegion 0 53.79 19.99 33.80 14.14 1096.82 12.68 59.46 23 E6a_E7a KnownJunction 0 56.16 17.44 39.42 17.74 865.43 15.12 41.98 24 ER7a ExonRegion 0 62.44 21.30 42.44 20.14 1049.76 9.46 55.45 25 E7a_E8a KnownJunction 0 59.07 22.72 38.00 14.06 1387.00 5.09 59.73 26 ER8a ExonRegion 0 75.96 13.62 46.84 18.82 1418.90 5.37 62.36 27 E8a_E9a KnownJunction 0 98.14 14.21 49.82 24.06 1525.94 12.41 59.65 28 ER9a ExonRegion 0 91.80 15.51 50.42 18.74 1550.26 13.39 66.64 29 E9a_E10a KnownJunction 0 85.55 15.34 43.20 16.36 1627.16 12.30 70.91 30 ER10a ExonRegion 0 74.13 11.16 50.74 13.28 1389.76 7.22 60.46 31 E10a_E11a KnownJunction 0 64.82 11.19 47.94 18.96 1284.39 4.48 64.35 32 ER11a ExonRegion 0 64.84 11.22 45.90 17.81 1441.54 6.16 68.71 33 E11a_E12a KnownJunction 0 66.89 10.11 47.93 16.01 1460.31 7.29 58.56 34 ER12a ExonRegion 0 62.68 16.89 45.48 21.11 1750.62 6.31 71.91 35 E12a_E13a KnownJunction 0 61.67 16.39 39.12 25.11 2309.96 4.64 64.88 36 ER13a ExonRegion 0 77.92 20.46 40.18 17.95 2263.69 7.28 69.92 37 E13a_E14a KnownJunction 0 102.06 22.09 45.87 16.93 2713.60 5.76 70.78 38 ER14a ExonRegion 0 135.07 28.07 63.75 20.03 2750.29 16.36 83.57 39 E14a_E15a KnownJunction 0 133.07 16.45 59.13 15.60 2545.10 10.53 68.38 40 ER15a ExonRegion 0 80.31 17.55 47.68 17.19 1716.55 14.86 60.36 41 E15a_E16a KnownJunction 0 47.15 6.70 34.36 15.77 1201.47 10.08 50.17 42 E15a_E17a KnownJunction 0 0.73 3.26 1.90 0.00 35.25 0.00 0.00 43 ER16a ExonRegion 0 45.73 7.42 33.86 17.69 941.49 6.48 49.92 44 E16_Da KnownBoundary 0 35.30 4.97 29.16 9.94 687.21 9.86 41.98 45 ER16b ExonRegion 0 15.65 4.15 17.56 4.85 294.43 4.49 17.44 46 ER17a ExonRegion 0 0.82 0.41 1.29 0.61 18.67 0.20 0.00 47 IG42 Intergenic 0 0.37 0.06 0.47 0.00 11.54 0.09 0.02 48 IG42_SR1 SilentIntergenicRegion 0 0.30 0.04 0.57 0.00 9.00 0.08 0.00 49 IG42_AR1 ActiveIntergenicRegion 0 0.54 0.00 0.29 0.00 19.14 0.22 0.00 50 IG42_SR2 SilentIntergenicRegion 0 0.78 0.00 0.27 0.00 16.74 0.37 0.00 51 IG42_AR2 ActiveIntergenicRegion 0 0.17 0.00 0.48 0.00 13.92 0.00 0.22 52 IG42_SR3 SilentIntergenicRegion 0 0.45 0.00 0.43 0.00 16.19 0.00 0.00 53 IG42_AR4 ActiveIntergenicRegion 0 0.35 0.38 0.58 0.00 9.83 0.00 0.00