Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	VRK2	Gene	0	147.93	65.39	85.56	15.03	111.93	25.00	113.30
2	340157	Transcript	0	82.21	27.55	50.47	6.20	48.08	9.85	66.12
3	394539	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.29
4	ER1a	ExonRegion	0	0.22	0.00	0.82	0.00	0.45	1.02	1.30
5	E1_Ab	KnownBoundary	0	2.87	0.00	2.17	0.00	0.95	4.37	6.18
6	ER1b	ExonRegion	0	27.84	12.44	11.48	3.98	22.63	3.82	21.40
7	E1a_E2a	KnownJunction	1	160.47	45.21	72.41	21.35	83.52	16.59	79.01
8	ER2a	ExonRegion	0	101.98	70.00	60.68	26.74	52.04	34.81	92.50
9	E2a_E3a	KnownJunction	0	143.03	77.61	81.41	22.38	61.53	37.44	102.08
10	I2_AR4	ActiveIntronRegion	0	15.81	17.74	9.05	5.54	8.68	4.85	6.54
11	I2_SR4	SilentIntronRegion	0	15.70	18.57	7.64	7.30	7.00	4.29	3.66
12	I2_AR5	ActiveIntronRegion	0	11.27	19.44	4.52	4.16	5.80	3.68	2.14
13	ER3a	ExonRegion	0	231.08	78.97	121.55	23.77	134.73	50.34	152.04
14	E3a_E4a	KnownJunction	0	209.44	68.38	114.69	20.59	227.67	38.70	141.29
15	E3a_E7a	NovelJunction	1	2.80	23.46	1.67	1.16	0.00	10.59	0.00
16	ER4a	ExonRegion	0	185.76	61.49	114.61	19.47	179.16	39.63	135.40
17	E4a_E5a	KnownJunction	0	209.76	55.67	127.46	16.44	193.60	44.59	123.19
18	ER5a	ExonRegion	0	315.09	89.14	155.88	19.97	179.26	44.39	162.29
19	E5a_E6a	KnownJunction	0	350.15	109.34	161.84	32.37	150.79	48.51	171.13
20	ER6a	ExonRegion	0	356.58	133.23	180.03	24.77	213.15	44.23	186.62
21	E6a_E7a	KnownJunction	0	384.84	147.12	182.42	25.28	255.38	34.04	196.35
22	ER7a	ExonRegion	0	288.58	141.65	152.37	21.79	217.83	43.36	193.35
23	E7a_E8a	KnownJunction	0	198.94	112.00	107.12	22.16	187.70	40.41	191.88
24	E8_Aa	NovelBoundary	1	72.99	1.05	39.56	0.00	0.00	0.00	0.56
25	ER8a	ExonRegion	0	192.85	129.41	125.98	27.20	188.74	44.41	207.92
26	E8a_E9a	KnownJunction	0	157.60	117.25	90.91	19.34	165.15	34.63	155.95
27	ER9a	ExonRegion	0	178.19	112.59	103.46	21.83	165.40	32.04	184.24
28	E9_Da	NovelBoundary	0	50.99	24.04	12.39	2.11	21.42	7.34	16.72
29	E9a_E10a	KnownJunction	1	144.12	105.58	99.51	17.93	183.25	18.33	162.53
30	I9	Intron	0	33.82	12.56	11.76	1.85	18.14	4.11	11.60
31	I9_AR1	ActiveIntronRegion	0	47.17	16.95	15.67	2.28	24.17	5.85	15.43
32	ER10a	ExonRegion	0	186.98	103.37	117.61	21.45	192.20	28.05	170.12
33	E10a_E11a	KnownJunction	0	271.70	102.22	139.81	19.29	177.05	37.22	186.64
34	ER11a	ExonRegion	0	217.96	92.36	135.22	23.03	161.10	33.83	182.06
35	E11a_E12a	KnownJunction	0	278.22	74.74	165.04	16.85	247.98	34.60	214.61
36	ER12a	ExonRegion	0	219.83	82.78	140.24	18.74	152.60	32.27	170.12
37	E12a_E14a	KnownJunction	0	185.63	62.47	113.66	13.92	89.61	20.02	150.34
38	ER13a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.29
39	E14_Aa	NovelBoundary	0	10.03	12.01	12.00	2.87	88.50	5.28	5.46
40	ER14a	ExonRegion	0	60.79	20.16	36.94	4.68	54.17	8.52	46.73