Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MAP4K3	Gene	0	144.10	78.98	172.80	162.68	187.67	117.03	94.26
2	341681	Transcript	0	89.16	63.71	109.62	113.86	80.98	75.23	41.19
3	263881	Transcript	0	70.74	39.78	113.97	90.88	159.89	69.72	78.00
4	IG34_AR16	ActiveIntergenicRegion	0	4.41	0.82	2.64	4.04	7.22	0.00	9.66
5	IG34_AR10	ActiveIntergenicRegion	0	7.27	3.29	5.28	4.02	7.77	1.28	6.74
6	IG34_AR9	ActiveIntergenicRegion	0	8.67	1.48	9.07	3.58	14.52	1.20	14.75
7	IG34_AR7	ActiveIntergenicRegion	0	17.37	3.88	15.47	6.76	17.37	1.37	15.92
8	IG34_AR5	ActiveIntergenicRegion	0	1.69	2.97	2.29	0.19	11.43	2.52	5.95
9	ER1a	ExonRegion	0	30.46	33.27	21.89	51.22	23.27	34.07	13.69
10	E1a_E2a	KnownJunction	0	69.15	86.91	60.89	120.99	74.32	84.12	43.73
11	E1a_E3a	NovelJunction	0	1.50	5.57	1.31	14.55	0.00	4.13	0.75
12	ER2a	ExonRegion	0	104.55	120.40	121.96	167.63	95.24	105.03	57.19
13	E2a_E3a	KnownJunction	0	146.69	144.86	169.70	201.53	68.12	138.74	66.64
14	E3_Aa	NovelBoundary	1	72.08	0.00	84.91	0.00	0.00	0.00	1.53
15	ER3a	ExonRegion	0	174.90	141.42	204.39	241.16	125.41	148.43	90.83
16	E3a_E4a	KnownJunction	0	145.57	101.88	202.02	224.59	157.27	130.51	97.68
17	ER4a	ExonRegion	0	154.75	106.98	205.65	172.20	180.86	108.96	93.08
18	E4a_E5a	KnownJunction	0	152.86	107.84	179.13	130.04	183.04	98.38	83.11
19	ER5a	ExonRegion	0	164.80	106.86	235.56	174.04	158.69	131.97	119.74
20	E5a_E6a	KnownJunction	0	121.82	77.00	186.37	182.84	144.26	121.70	106.96
21	ER6a	ExonRegion	0	137.41	122.78	224.02	215.46	178.91	130.36	126.61
22	E6a_E7a	KnownJunction	0	88.32	111.36	151.36	152.06	211.76	90.58	85.31
23	ER7a	ExonRegion	0	167.84	132.73	261.14	201.66	190.09	138.62	121.79
24	E7a_E8a	KnownJunction	0	183.54	112.15	271.40	174.76	170.48	129.34	116.18
25	ER8a	ExonRegion	0	184.81	114.90	253.97	210.84	198.77	132.24	117.52
26	E8a_E9a	KnownJunction	0	144.99	101.75	186.44	185.49	165.27	133.09	99.04
27	ER9a	ExonRegion	0	169.59	110.66	245.08	216.39	185.46	124.25	119.35
28	E9a_E10a	KnownJunction	0	224.20	114.33	291.20	192.10	240.00	138.61	99.60
29	ER10a	ExonRegion	0	260.50	114.74	323.64	230.33	230.67	161.70	129.08
30	E10a_E11a	KnownJunction	0	246.98	95.97	328.38	247.02	260.04	175.30	146.62
31	ER11a	ExonRegion	0	214.56	91.90	307.66	205.98	242.74	148.94	133.83
32	E11a_E12a	KnownJunction	0	214.22	92.13	275.22	164.71	277.03	139.04	109.72
33	ER12a	ExonRegion	0	183.63	92.39	248.03	189.40	225.90	130.86	116.80
34	E12a_E13a	KnownJunction	0	150.74	105.01	214.25	194.24	207.04	143.70	101.11
35	ER13a	ExonRegion	0	169.05	104.22	236.23	189.81	204.74	129.18	126.79
36	E13a_E14a	KnownJunction	0	176.26	109.63	258.74	201.69	274.19	131.77	142.78
37	ER14a	ExonRegion	0	183.43	113.97	261.60	219.66	239.25	144.75	141.09
38	E14a_E15a	KnownJunction	0	83.55	36.04	114.52	101.56	134.58	71.53	74.35
39	E14a_E16a	KnownJunction	0	89.16	63.71	109.62	113.86	80.98	75.23	41.19
40	ER15a	ExonRegion	0	75.65	41.38	120.34	103.22	166.43	75.04	81.66
41	E15a_E16a	KnownJunction	0	53.02	41.90	107.06	67.86	178.66	62.60	77.98
42	ER16a	ExonRegion	0	171.01	116.69	248.34	233.84	281.38	143.65	126.14
43	E16a_E17a	KnownJunction	0	156.38	101.93	191.40	223.66	323.45	117.33	99.98
44	ER17a	ExonRegion	0	210.87	133.82	246.86	267.94	402.12	158.66	160.90
45	E17a_E18a	KnownJunction	0	169.15	102.48	193.25	208.87	443.26	140.22	154.91
46	ER18a	ExonRegion	0	258.88	143.89	312.07	341.74	368.98	182.13	235.71
47	E18a_E19a	KnownJunction	0	205.30	114.70	276.50	326.45	284.52	147.24	198.92
48	ER19a	ExonRegion	0	189.00	156.60	264.46	376.67	248.68	208.53	213.59
49	E19a_E20a	KnownJunction	0	119.05	143.94	132.09	277.30	195.00	189.34	117.12
50	ER20a	ExonRegion	0	183.28	138.74	200.85	283.53	302.48	193.45	183.48
51	E20a_E21a	KnownJunction	0	90.51	58.06	97.99	121.40	186.73	110.58	76.83
52	ER21a	ExonRegion	0	111.17	65.69	124.55	154.87	176.53	102.69	83.60
53	E21a_E22a	KnownJunction	0	109.77	52.94	129.02	131.01	237.79	108.86	69.92
54	ER22a	ExonRegion	0	170.19	74.71	158.98	145.21	251.19	110.25	81.05
55	E22a_E23a	KnownJunction	0	168.20	64.10	136.69	131.93	239.66	84.93	67.10
56	E22a_E24a	NovelJunction	1	19.84	5.41	7.03	29.26	0.00	19.70	1.59
57	ER23a	ExonRegion	0	216.27	76.44	196.41	177.77	274.57	114.36	102.97
58	E23a_E24a	KnownJunction	0	221.28	89.77	217.72	187.15	230.25	124.22	108.40
59	ER24a	ExonRegion	0	234.56	86.06	229.15	189.43	264.97	122.62	101.59
60	E24a_E25a	KnownJunction	0	193.70	85.91	184.30	187.52	241.16	113.52	89.56
61	ER25a	ExonRegion	0	173.19	87.57	163.68	170.32	208.26	117.29	92.92
62	E25_Da	NovelBoundary	1	73.82	2.47	60.25	1.68	1.96	1.45	7.28
63	E25a_E26a	KnownJunction	0	140.70	76.45	134.39	145.72	207.57	111.57	75.91
64	ER26a	ExonRegion	0	124.76	65.71	148.94	111.53	178.87	85.55	72.38
65	E26a_E27a	KnownJunction	0	98.74	52.54	134.99	62.91	135.04	70.43	59.07
66	E26a_E28a	NovelJunction	0	2.02	0.00	3.02	8.99	0.00	3.32	0.00
67	ER27a	ExonRegion	0	99.68	54.81	139.74	110.77	150.40	89.48	66.37
68	E27a_E28a	KnownJunction	0	93.28	57.53	108.27	130.66	168.86	96.00	66.28
69	ER28a	ExonRegion	0	110.58	65.12	147.96	133.95	155.17	94.76	84.64
70	E28a_E29a	KnownJunction	0	97.05	51.10	149.51	119.15	172.85	93.08	79.21
71	ER29a	ExonRegion	0	103.88	55.00	138.47	132.70	155.13	96.88	83.14
72	E29a_E30a	KnownJunction	0	98.09	59.11	133.00	158.10	154.52	92.59	72.43
73	ER30a	ExonRegion	0	116.87	76.66	153.80	181.35	179.43	105.06	87.98
74	E30a_E31a	KnownJunction	0	143.38	88.56	167.76	183.33	180.50	124.11	99.09
75	ER31a	ExonRegion	0	162.26	75.24	194.12	174.19	226.43	109.02	96.00
76	E31a_E32a	KnownJunction	0	129.71	52.67	173.16	166.29	165.61	105.78	85.92
77	ER32a	ExonRegion	0	112.20	52.50	148.15	140.10	174.38	94.06	82.22
78	E32_Da	NovelBoundary	1	66.93	8.46	85.04	4.85	12.89	12.22	14.35
79	E32a_E33a	KnownJunction	0	95.57	48.55	112.86	115.33	188.69	69.01	73.26
80	I32_AR1	ActiveIntronRegion	0	26.83	10.85	35.14	9.89	8.46	7.55	11.78
81	I32_AR3	ActiveIntronRegion	0	31.29	10.81	31.82	6.51	6.76	9.01	6.91
82	ER33a	ExonRegion	0	135.85	60.29	167.43	139.70	204.94	87.35	107.31
83	E33a_E34a	KnownJunction	0	137.42	59.48	196.76	126.84	230.21	100.93	115.93
84	E34_Aa	NovelBoundary	1	48.00	5.57	28.37	11.57	6.34	8.12	5.00
85	ER34a	ExonRegion	0	136.98	61.24	150.02	135.97	180.30	119.44	79.08