Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ITSN2	Gene	0	152.60	108.13	159.03	140.96	29.43	77.65	47.18
2	380883	Transcript	0	3.14	15.55	2.76	7.87	0.19	7.16	1.58
3	406921	Transcript	0	0.41	1.71	1.18	0.46	0.00	1.20	0.17
4	355123	Transcript	0	0	0	0	0	0	0	0
5	380868	Transcript	0	0	0	0	0	0	0	0
6	407704	Transcript	0	0.87	0.04	2.63	1.45	0.02	0.01	0.02
7	361999	Transcript	0	17.67	29.46	18.46	30.24	2.02	23.29	6.24
8	ER1a	ExonRegion	0	3.14	15.55	2.76	7.87	0.19	7.16	1.58
9	E1_Ab	KnownBoundary	0	11.03	30.47	9.56	25.93	0.88	17.47	4.13
10	ER1b	ExonRegion	0	3.95	40.02	5.12	48.80	0.22	27.31	6.52
11	E1_Ac	KnownBoundary	0	9.91	54.70	14.28	86.26	1.06	34.84	14.20
12	ER1c	ExonRegion	0	12.56	62.54	15.75	62.18	1.55	46.46	8.62
13	E1a_E2b	KnownJunction	0	64.66	102.25	74.01	124.16	4.54	92.35	29.01
14	ER2a	ExonRegion	0	17.67	29.46	18.46	30.24	2.02	23.29	6.24
15	ER2b	ExonRegion	0	101.25	137.30	96.47	123.96	18.51	93.60	30.75
16	E2a_E3a	KnownJunction	0	113.84	154.40	91.70	124.78	27.80	83.24	34.47
17	ER3a	ExonRegion	0	200.51	229.35	168.53	196.98	41.43	145.01	45.85
18	E3a_E4a	KnownJunction	0	378.56	312.03	277.68	321.95	69.90	220.03	66.45
19	E3a_E5a	NovelJunction	1	3.61	14.95	5.35	2.60	0.00	2.71	4.27
20	ER4a	ExonRegion	0	477.40	384.77	383.56	397.39	51.11	257.17	91.42
21	E4a_E5a	KnownJunction	0	376.93	388.16	375.64	400.19	55.05	271.37	81.24
22	ER5a	ExonRegion	0	465.24	366.35	423.70	367.50	87.99	205.60	120.09
23	E5a_E6a	KnownJunction	0	1.03	0.00	3.69	1.68	0.00	0.00	0.00
24	E5a_E7a	KnownJunction	0	275.15	397.01	320.20	355.62	29.23	187.57	100.94
25	ER6a	ExonRegion	0	0.70	0.08	1.56	1.22	0.04	0.03	0.05
26	ER7a	ExonRegion	0	228.56	275.02	237.11	300.02	50.60	137.19	100.84
27	E7a_E8a	KnownJunction	0	144.92	182.40	175.46	226.64	31.65	100.58	81.07
28	ER8a	ExonRegion	0	141.10	159.30	177.71	214.76	27.39	88.73	64.41
29	E8a_E9a	KnownJunction	0	159.89	138.40	169.46	176.12	31.77	77.26	49.36
30	E8a_E10a	NovelJunction	0	2.50	4.54	4.35	8.59	0.00	8.50	0.85
31	ER9a	ExonRegion	0	219.20	153.59	265.77	199.34	41.04	95.83	66.61
32	E9a_E10a	KnownJunction	0	254.27	170.34	298.08	236.91	36.08	121.22	61.74
33	E10_Aa	NovelBoundary	1	120.12	4.52	122.98	2.84	0.00	0.00	3.05
34	ER10a	ExonRegion	0	214.60	166.89	256.53	215.90	35.47	105.80	60.72
35	E10a_E11a	KnownJunction	0	142.27	161.10	195.90	180.07	25.63	78.44	51.95
36	ER11a	ExonRegion	0	164.53	169.62	206.64	221.71	33.03	82.20	69.85
37	E11a_E12a	KnownJunction	0	116.55	162.28	137.83	209.77	27.94	71.80	58.40
38	ER12a	ExonRegion	0	116.43	159.53	146.19	204.79	31.94	72.88	63.85
39	E12a_E13a	KnownJunction	0	175.46	154.24	180.36	223.04	34.19	74.72	74.14
40	ER13a	ExonRegion	0	270.72	216.46	271.11	235.63	40.96	128.64	85.58
41	E13a_E14a	KnownJunction	0	285.03	159.49	308.13	180.16	41.06	99.27	79.57
42	ER14a	ExonRegion	0	253.67	136.06	283.47	177.72	42.07	90.03	78.04
43	E14a_E15a	KnownJunction	0	269.51	153.64	325.07	207.92	55.49	61.02	79.04
44	ER15a	ExonRegion	0	228.75	143.74	281.01	187.78	41.29	81.05	73.10
45	E15a_E16a	KnownJunction	0	204.82	112.78	264.90	138.33	47.19	55.15	58.11
46	E15a_E17a	NovelJunction	1	17.64	4.05	3.79	13.49	0.00	1.66	0.00
47	ER16a	ExonRegion	0	262.60	112.79	313.68	146.31	52.04	66.94	65.45
48	E16a_E17a	KnownJunction	0	329.64	117.51	361.66	157.24	47.14	96.83	71.24
49	ER17a	ExonRegion	0	297.32	132.09	324.03	176.44	35.53	100.30	76.88
50	E17a_E18a	KnownJunction	0	1.77	0.00	1.78	4.28	0.00	2.79	0.76
51	E17a_E19a	KnownJunction	0	309.36	121.74	308.26	199.07	55.83	104.28	72.46
52	ER18a	ExonRegion	0	2.44	1.27	5.47	4.13	0.02	2.44	0.31
53	E18a_E19a	KnownJunction	0	2.29	0.00	3.99	2.79	0.00	2.57	0.00
54	ER19a	ExonRegion	0	244.85	111.58	247.97	156.24	31.86	69.68	62.23
55	E19a_E20a	KnownJunction	0	234.73	104.14	264.56	145.02	34.56	46.52	60.06
56	ER20a	ExonRegion	0	252.64	77.96	231.19	122.75	33.86	68.38	40.29
57	E20_Da	NovelBoundary	0	66.38	26.25	81.87	37.76	12.10	30.77	12.35
58	E20a_E21a	KnownJunction	1	361.74	119.40	372.69	172.65	33.40	110.31	53.48
59	ER21a	ExonRegion	1	340.46	97.60	309.11	155.21	51.94	80.00	53.49
60	E21a_E22a	KnownJunction	0	295.91	79.31	321.39	163.20	49.93	70.22	56.32
61	ER22a	ExonRegion	0	366.57	104.99	321.05	184.91	61.14	71.24	65.10
62	E22a_E23a	KnownJunction	0	270.81	74.03	216.63	143.12	57.33	48.64	54.76
63	ER23a	ExonRegion	0	181.40	79.83	193.93	126.39	53.66	57.08	48.85
64	E23a_E24a	KnownJunction	0	149.98	86.51	146.38	131.96	41.79	52.13	54.32
65	ER24a	ExonRegion	0	201.15	122.54	214.28	193.99	50.10	83.74	65.83
66	E24a_E25a	KnownJunction	0	190.63	122.21	216.83	175.23	51.62	75.31	64.91
67	ER25a	ExonRegion	0	238.16	118.18	222.65	144.30	49.65	63.02	65.94
68	E25a_E26a	KnownJunction	0	275.92	113.76	211.96	109.04	55.72	54.81	57.68
69	ER26a	ExonRegion	0	264.08	147.19	248.60	169.27	50.20	90.63	64.76
70	E26a_E27a	KnownJunction	0	271.58	129.18	233.85	148.68	42.21	75.76	61.15
71	ER27a	ExonRegion	0	284.52	127.74	268.51	164.73	54.77	85.61	72.65
72	E27a_E28a	KnownJunction	0	234.26	112.39	237.90	143.18	74.85	75.25	61.64
73	ER28a	ExonRegion	0	274.63	130.96	265.43	167.30	66.20	81.30	77.50
74	E28a_E29a	KnownJunction	0	238.78	151.51	250.63	229.87	69.39	89.70	83.70
75	ER29a	ExonRegion	0	266.31	172.95	258.98	233.16	74.31	103.68	97.56
76	E29a_E30a	KnownJunction	0	226.58	200.37	241.81	231.79	89.56	137.54	102.77
77	ER30a	ExonRegion	0	172.11	160.07	196.78	210.13	52.65	107.37	85.11
78	E30a_E31a	KnownJunction	0	72.43	58.72	97.68	131.61	27.82	73.06	36.95
79	I30_AR2	ActiveIntronRegion	0	91.24	54.40	95.68	59.74	19.16	44.94	33.07
80	ER31a	ExonRegion	0	70.08	73.21	89.78	114.92	22.42	64.83	34.71
81	E31_Da	KnownBoundary	0	0.00	1.63	0.65	0.00	0.00	0.00	0.00
82	E31a_E32a	KnownJunction	0	57.93	54.70	81.12	113.59	16.92	49.69	27.54
83	ER31b	ExonRegion	0	0.41	1.71	1.18	0.46	0.00	1.20	0.17
84	ER32a	ExonRegion	0	63.23	66.37	74.51	101.14	14.06	53.63	29.18
85	E32a_E33a	KnownJunction	0	65.39	50.10	52.41	77.43	15.21	58.29	24.08
86	ER33a	ExonRegion	0	70.16	67.64	79.96	88.07	14.43	65.60	24.86
87	E33a_E34a	KnownJunction	0	55.44	82.94	66.46	67.00	12.82	62.93	21.31
88	ER34a	ExonRegion	0	59.38	68.41	80.51	87.98	11.42	72.71	31.11
89	E34a_E35a	KnownJunction	0	59.12	57.51	64.01	74.61	20.84	62.95	34.42
90	ER35a	ExonRegion	0	52.70	57.05	63.30	81.27	14.69	59.23	29.96
91	E35a_E36a	KnownJunction	0	62.89	55.70	76.21	83.14	15.40	62.15	39.96
92	ER36a	ExonRegion	0	139.15	103.16	152.16	154.91	21.70	101.07	47.62
93	E36a_E37a	KnownJunction	0	241.32	153.43	207.12	243.36	29.23	162.38	48.25
94	ER37a	ExonRegion	0	193.72	138.34	191.90	208.61	27.95	147.71	55.63
95	E37a_E38a	KnownJunction	0	114.16	65.28	94.48	108.96	11.76	71.42	34.68
96	ER38a	ExonRegion	0	102.35	64.18	90.76	105.15	17.66	84.39	32.06
97	E38a_E39a	KnownJunction	0	67.24	64.55	74.14	83.03	9.11	58.05	22.89
98	ER39a	ExonRegion	0	52.39	54.96	71.67	96.21	15.61	72.99	29.37
99	E39a_E40a	KnownJunction	0	65.52	57.09	84.37	111.53	12.13	76.06	34.81
100	ER40a	ExonRegion	0	67.97	62.82	86.07	123.56	14.75	73.86	31.00
101	E40a_E41a	KnownJunction	0	53.22	64.60	88.54	111.13	5.56	78.55	31.93
102	ER41a	ExonRegion	0	56.49	59.19	70.18	99.74	14.33	72.62	26.05
103	ER41b	ExonRegion	0	0.77	1.21	3.39	1.25	0.00	1.23	0.00