Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	FAM179A	Gene	0	0.35	0.27	4.46	1.17	0.78	0.46	0.02
2	401723	Transcript	0	0.32	0.00	2.71	0.50	0.80	0.00	0.00
3	379558	Transcript	0	0	0	0	0	0	0	0
4	403861	Transcript	0	0.00	0.00	1.35	0.00	0.00	0.00	0.00
5	344886	Transcript	0	0.03	0.02	0.51	0.02	0.06	0.04	0.00
6	IG12_AR2	ActiveIntergenicRegion	0	0.40	2.43	2.60	8.53	2.26	2.45	1.35
7	IG12_SR2	SilentIntergenicRegion	0	1.34	2.05	3.82	10.69	2.61	1.94	1.17
8	ER1a	ExonRegion	0	0.67	0.00	1.17	0.99	0.95	0.00	0.00
9	E1a_E3a	KnownJunction	0	0.62	0.00	8.81	1.03	0.00	0.00	0.00
10	ER2a	ExonRegion	0	0.00	0.75	0.00	0.00	0.00	0.00	0.00
11	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	E3a_E9b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER3a	ExonRegion	0	0.00	0.00	0.34	1.79	0.00	0.00	0.00
14	ER3b	ExonRegion	0	0.00	1.44	7.47	2.49	0.37	1.53	0.00
15	E3b_E4a	KnownJunction	0	0.00	1.00	2.20	1.54	0.00	0.00	0.00
16	ER4a	ExonRegion	0	0.00	0.08	2.43	3.11	0.82	1.68	0.00
17	E4a_E5a	KnownJunction	0	0.00	0.00	5.55	5.77	0.97	0.00	0.00
18	ER5a	ExonRegion	0	0.20	0.00	7.60	2.61	1.02	1.80	0.00
19	E5a_E6a	KnownJunction	0	0.00	0.00	6.11	0.00	1.18	1.66	0.00
20	ER6a	ExonRegion	0	0.28	0.44	6.24	1.73	0.70	0.62	0.00
21	E6a_E7a	KnownJunction	0	0.00	0.00	5.82	2.11	0.00	0.00	0.00
22	ER7a	ExonRegion	0	0.00	0.55	5.64	1.57	0.59	0.00	0.00
23	E7a_E8a	KnownJunction	0	0.00	0.00	3.02	0.00	1.01	0.00	0.00
24	ER8a	ExonRegion	0	0.10	1.21	3.66	1.25	1.10	0.00	0.00
25	E8a_E9a	KnownJunction	0	0.62	1.31	6.94	1.54	1.80	0.00	0.00
26	ER9a	ExonRegion	0	0.80	0.81	6.65	1.67	0.97	0.00	0.00
27	E9_Ab	KnownBoundary	0	0.00	1.31	7.93	1.49	2.07	0.00	0.00
28	ER9b	ExonRegion	0	0.09	0.43	6.19	0.56	2.64	0.00	0.00
29	E9a_E10a	KnownJunction	0	0.62	0.00	4.30	0.00	0.00	0.00	0.00
30	E9a_E14a	KnownJunction	0	0.00	0.00	0.85	0.00	2.24	0.00	0.00
31	ER10a	ExonRegion	0	0.98	0.00	3.52	0.26	0.27	0.00	0.00
32	E10a_E11a	KnownJunction	0	0.00	0.00	2.08	1.68	0.00	0.00	0.00
33	ER11a	ExonRegion	0	0.71	0.00	1.54	2.49	0.11	0.00	0.29
34	E11a_E12a	KnownJunction	0	0.85	0.00	1.39	4.88	1.18	0.00	0.00
35	ER12a	ExonRegion	0	0.18	0.00	4.31	3.11	0.79	0.46	0.00
36	E12a_E13a	KnownJunction	0	1.03	0.00	4.60	2.30	1.08	1.34	0.00
37	ER13a	ExonRegion	0	0.29	1.51	4.34	2.18	0.70	0.77	0.00
38	E13a_E14a	KnownJunction	0	0.00	1.34	3.87	3.36	0.00	1.50	0.00
39	ER14a	ExonRegion	0	0.49	0.49	7.25	1.55	2.03	0.15	0.00
40	E14a_E15a	KnownJunction	0	0.00	0.00	4.50	0.00	3.34	0.00	0.00
41	ER15a	ExonRegion	0	1.73	0.58	13.31	1.19	2.11	0.00	0.00
42	E15a_E16a	KnownJunction	0	4.49	0.00	13.16	0.00	2.21	0.00	0.00
43	ER16a	ExonRegion	0	3.76	1.46	24.20	0.92	3.03	0.00	0.00
44	E16a_E17b	KnownJunction	0	2.80	1.08	19.40	1.14	3.53	0.00	0.00
45	ER17a	ExonRegion	0	0.06	0.03	0.50	0.03	0.06	0.00	0.00
46	E17_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
47	ER17b	ExonRegion	0	1.72	0.88	15.58	1.32	1.57	0.00	0.00
48	E17_Da	KnownBoundary	0	1.49	1.55	13.84	1.19	2.05	0.00	0.00
49	ER17c	ExonRegion	0	0.97	1.21	10.22	1.62	1.41	0.00	0.00
50	E17b_E18a	KnownJunction	0	1.03	0.00	7.92	1.65	0.00	0.00	0.00
51	ER18a	ExonRegion	0	0.89	0.98	9.62	1.67	1.23	0.97	0.00
52	E18a_E19a	KnownJunction	0	1.62	0.00	8.78	1.41	2.17	0.00	0.00
53	ER19a	ExonRegion	0	1.12	0.00	14.28	3.38	3.83	0.00	0.00
54	E19a_E20a	KnownJunction	0	0.00	0.00	6.93	2.79	2.05	0.00	0.00
55	ER20a	ExonRegion	0	0.45	0.00	8.41	3.70	3.35	1.61	0.00
56	E20_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
57	E20a_E21a	KnownJunction	0	0.00	0.00	12.52	3.17	5.69	2.68	0.00
58	ER20b	ExonRegion	0	0.00	0.00	0.51	0.00	0.06	0.09	0.00
59	ER21a	ExonRegion	0	0.00	0.00	4.51	2.18	0.86	2.06	0.11
60	ER21b	ExonRegion	0	0.00	0.00	1.35	0.00	0.00	0.00	0.00