Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SPDYA	Gene	0	18.82	7.12	10.64	6.01	2.50	11.69	5.98
2	379579	Transcript	0	0.83	0.23	0.23	0.65	0.20	0.92	0.45
3	334056	Transcript	0	1.44	0.77	1.65	0.39	0.49	0.79	0.67
4	379582	Transcript	0	5.87	0.61	4.95	1.00	0.36	3.66	2.72
5	IG10	Intergenic	0	11.62	2.53	7.81	4.68	0.28	5.72	4.82
6	IG10_SR2	SilentIntergenicRegion	0	10.21	2.20	7.45	3.81	0.34	5.10	4.63
7	IG10_AR2	ActiveIntergenicRegion	0	25.74	6.52	16.72	5.75	0.33	13.50	9.49
8	IG10_SR3	SilentIntergenicRegion	0	23.89	3.04	10.65	12.50	0.00	5.90	11.39
9	IG10_AR3	ActiveIntergenicRegion	0	22.17	3.02	10.10	10.10	0.00	7.54	6.74
10	ER1a	ExonRegion	0	0.00	0.70	0.00	0.08	0.59	2.15	0.00
11	E1_Ab	KnownBoundary	0	0.00	1.29	1.44	2.82	1.87	3.16	0.60
12	ER1b	ExonRegion	0	1.32	1.71	0.07	1.07	2.35	3.21	0.58
13	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	I1	Intron	0	13.14	4.03	9.56	7.82	0.91	12.19	6.00
16	I1_AR1	ActiveIntronRegion	0	8.98	4.93	5.73	6.19	0.76	11.43	3.15
17	I1_SR2	SilentIntronRegion	0	11.57	3.51	8.65	6.33	0.99	8.93	5.40
18	I1_AR3	ActiveIntronRegion	0	23.03	5.03	17.09	14.27	1.11	19.64	10.88
19	E2_Aa	NovelBoundary	0	15.61	8.67	13.61	10.05	0.95	25.73	11.06
20	ER2a	ExonRegion	0	2.52	0.69	4.43	1.18	0.37	2.37	2.01
21	E2_Da	NovelBoundary	0	19.99	6.38	15.38	11.57	2.19	19.24	13.46
22	E2a_E3a	KnownJunction	0	1.80	1.63	0.52	0.00	1.11	0.00	0.00
23	I2	Intron	0	15.45	2.52	10.01	5.32	1.13	10.46	6.64
24	I2_SR1	SilentIntronRegion	0	15.49	2.52	10.04	5.33	1.13	10.49	6.65
25	E3_Aa	NovelBoundary	0	36.75	9.30	21.76	17.64	1.11	16.37	16.51
26	ER3a	ExonRegion	0	38.34	11.97	25.68	19.53	3.77	19.39	10.20
27	E3a_E4a	KnownJunction	0	9.10	3.97	4.05	3.12	0.97	2.73	0.89
28	I3	Intron	0	9.94	2.08	6.99	3.42	0.29	4.56	3.46
29	I3_SR3	SilentIntronRegion	0	12.31	2.16	9.24	4.57	0.28	5.25	3.60
30	E4_Aa	NovelBoundary	0	15.00	2.50	11.65	5.53	0.00	1.61	4.13
31	ER4a	ExonRegion	0	10.54	9.10	5.91	1.92	0.15	4.09	1.13
32	E4_Da	NovelBoundary	0	15.37	1.63	12.19	7.67	0.00	4.37	5.80
33	E4a_E5a	KnownJunction	0	10.51	11.38	8.74	1.68	0.00	5.09	0.75
34	ER5a	ExonRegion	0	11.97	6.26	10.68	3.83	0.48	7.30	1.90
35	E5a_E6a	KnownJunction	0	9.76	3.70	13.47	3.36	0.00	4.42	1.61
36	ER6a	ExonRegion	0	21.21	6.44	12.06	7.64	0.74	9.59	4.48
37	E6a_E7a	KnownJunction	0	11.42	8.28	6.41	4.44	0.88	4.90	0.57
38	E7_Aa	NovelBoundary	0	5.52	3.26	1.31	1.44	1.18	8.39	2.81
39	ER7a	ExonRegion	0	28.92	13.14	13.54	8.12	0.26	23.20	6.41
40	E7_Da	KnownBoundary	0	8.71	1.29	2.37	1.68	0.00	5.76	1.73
41	E7a_E8a	KnownJunction	0	18.91	10.09	8.29	0.00	0.00	16.43	2.75
42	ER7b	ExonRegion	0	5.87	0.61	4.95	1.00	0.36	3.66	2.72
43	E7_Db	NovelBoundary	0	1.47	0.00	0.00	1.52	0.00	12.54	3.80
44	E8_Aa	NovelBoundary	0	21.80	11.09	17.83	11.32	47.74	25.22	15.11
45	ER8a	ExonRegion	0	19.72	7.80	9.52	4.49	5.05	12.22	8.41
46	ER8b	ExonRegion	0	2.50	0.00	0.68	1.87	0.00	0.61	1.35